TPO
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.44Å | |
| N | H | sing | 1.01Å | 1.02Å | |
| N | H2 | sing | 1.01Å | 1.02Å | |
| CA | CB | sing | 1.53Å | 1.51Å | |
| CA | C | sing | 1.51Å | 1.49Å | |
| CA | HA | sing | 1.09Å | 1.11Å | |
| CB | CG2 | sing | 1.53Å | 1.53Å | |
| CB | OG1 | sing | 1.43Å | 1.39Å | |
| CB | HB | sing | 1.09Å | 1.12Å | |
| CG2 | HG21 | sing | 1.09Å | 1.12Å | |
| CG2 | HG22 | sing | 1.09Å | 1.12Å | |
| CG2 | HG23 | sing | 1.09Å | 1.11Å | |
| OG1 | P | sing | 1.61Å | 1.57Å | |
| P | O1P | doub | 1.48Å | 1.45Å | |
| P | O2P | sing | 1.61Å | 1.46Å | |
| P | O3P | sing | 1.61Å | 1.49Å | |
| O2P | HOP2 | sing | 0.97Å | 0.95Å | |
| O3P | HOP3 | sing | 0.97Å | 0.95Å | |
| C | O | doub | 1.21Å | 1.23Å | |
| C | OXT | sing | 1.34Å | 1.31Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 112.6° | 106.7° |
| CA | N | H2 | 111.1° | 106.7° |
| N | CA | CB | 112.6° | 109.4° |
| N | CA | C | 113.7° | 109.5° |
| N | CA | HA | 103.0° | 109.4° |
| H | N | H2 | 111.1° | 106.7° |
| CB | CA | C | 105.3° | 109.5° |
| CB | CA | HA | 111.7° | 109.5° |
| CA | CB | CG2 | 111.7° | 109.5° |
| CA | CB | OG1 | 110.9° | 109.4° |
| CA | CB | HB | 108.2° | 109.4° |
| C | CA | HA | 110.6° | 109.5° |
| CA | C | O | 121.4° | 120.0° |
| CA | C | OXT | 113.1° | 120.0° |
| CG2 | CB | OG1 | 112.9° | 109.5° |
| CG2 | CB | HB | 106.0° | 109.5° |
| CB | CG2 | HG21 | 111.7° | 109.5° |
| CB | CG2 | HG22 | 111.4° | 109.5° |
| CB | CG2 | HG23 | 111.4° | 109.5° |
| OG1 | CB | HB | 106.9° | 109.5° |
| CB | OG1 | P | 116.3° | 106.8° |
| HG21 | CG2 | HG22 | 111.3° | 109.5° |
| HG21 | CG2 | HG23 | 111.4° | 109.4° |
| HG22 | CG2 | HG23 | 99.0° | 109.4° |
| OG1 | P | O1P | 103.9° | 109.5° |
| OG1 | P | O2P | 105.5° | 109.5° |
| OG1 | P | O3P | 107.5° | 109.5° |
| O1P | P | O2P | 119.6° | 109.4° |
| O1P | P | O3P | 112.9° | 109.5° |
| O2P | P | O3P | 106.7° | 109.5° |
| P | O2P | HOP2 | 105.5° | 106.8° |
| P | O3P | HOP3 | 107.5° | 106.8° |
| O | C | OXT | 125.4° | 120.0° |
| C | OXT | HXT | 113.1° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 125.4° | 113.8° |
| N | CA | CB | C | 124.4° | 120.0° |
| N | CA | CB | HA | 115.4° | 119.9° |
| N | CA | C | HA | 115.3° | 120.0° |
| N | CA | CB | CG2 | 175.2° | 60.0° |
| N | CA | CB | OG1 | 48.3° | 60.1° |
| N | CA | CB | HB | 68.6° | 180.0° |
| N | CA | C | O | 40.5° | 30.1° |
| N | CA | C | OXT | 141.1° | 150.0° |
| H | N | CA | CB | 179.9° | 53.7° |
| H | N | CA | C | 60.3° | 173.8° |
| H | N | CA | HA | 59.5° | 66.2° |
| H2 | N | CA | CB | 54.7° | 60.1° |
| H2 | N | CA | C | 174.4° | 60.0° |
| H2 | N | CA | HA | 65.9° | 180.0° |
| CB | CA | C | HA | 120.9° | 120.0° |
| CA | CB | CG2 | OG1 | 125.7° | 120.0° |
| CA | CB | CG2 | HB | 117.6° | 120.0° |
| CA | CB | OG1 | HB | 117.7° | 119.9° |
| CA | CB | CG2 | HG21 | 180.0° | 60.0° |
| CA | CB | CG2 | HG22 | 54.8° | 180.0° |
| CA | CB | CG2 | HG23 | 54.7° | 60.0° |
| CA | CB | OG1 | P | 108.9° | 120.0° |
| CB | CA | C | O | 83.3° | 89.9° |
| CB | CA | C | OXT | 95.1° | 90.0° |
| C | CA | CB | CG2 | 60.4° | 180.0° |
| C | CA | CB | OG1 | 172.8° | 60.0° |
| C | CA | CB | HB | 55.8° | 60.0° |
| CA | C | O | OXT | 178.2° | 179.9° |
| CA | C | OXT | HXT | 180.0° | 179.9° |
| HA | CA | CB | CG2 | 59.8° | 60.0° |
| HA | CA | CB | OG1 | 67.1° | 180.0° |
| HA | CA | CB | HB | 176.0° | 60.1° |
| HA | CA | C | O | 155.8° | 150.0° |
| HA | CA | C | OXT | 25.8° | 30.0° |
| CG2 | CB | OG1 | HB | 116.1° | 120.0° |
| CB | CG2 | HG21 | HG22 | 125.2° | 120.1° |
| CB | CG2 | HG21 | HG23 | 125.3° | 120.0° |
| CB | CG2 | HG22 | HG23 | 117.3° | 120.1° |
| CG2 | CB | OG1 | P | 124.9° | 120.0° |
| OG1 | CB | CG2 | HG21 | 54.3° | 60.1° |
| OG1 | CB | CG2 | HG22 | 179.5° | 60.0° |
| OG1 | CB | CG2 | HG23 | 71.0° | 180.0° |
| CB | OG1 | P | O1P | 170.1° | 60.0° |
| CB | OG1 | P | O2P | 43.5° | 180.0° |
| CB | OG1 | P | O3P | 70.1° | 60.0° |
| HB | CB | CG2 | HG21 | 62.4° | 179.9° |
| HB | CB | CG2 | HG22 | 62.8° | 60.0° |
| HB | CB | CG2 | HG23 | 172.3° | 60.0° |
| HB | CB | OG1 | P | 8.8° | 0.0° |
| HG21 | CG2 | HG22 | HG23 | 117.3° | 119.9° |
| OG1 | P | O1P | O2P | 117.1° | 120.0° |
| OG1 | P | O1P | O3P | 116.1° | 120.0° |
| OG1 | P | O2P | O3P | 114.1° | 120.0° |
| OG1 | P | O2P | HOP2 | 180.0° | 180.0° |
| OG1 | P | O3P | HOP3 | 179.9° | 60.0° |
| O1P | P | O2P | O3P | 129.6° | 120.0° |
| O1P | P | O2P | HOP2 | 63.7° | 60.0° |
| O1P | P | O3P | HOP3 | 66.1° | 179.9° |
| O2P | P | O3P | HOP3 | 67.2° | 60.0° |
| O3P | P | O2P | HOP2 | 65.9° | 60.0° |
| O | C | OXT | HXT | 1.7° | 0.0° |
