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TOZ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NCA1sing1.47Å1.48Å
CA1C2sing1.51Å1.50Å
C2N2doub1.29Å1.31ÅAromatic
C2S1sing1.71Å1.73ÅAromatic
N2C3sing1.33Å1.39ÅAromatic
S1C8sing1.76Å1.71ÅAromatic
C3C8doub1.35Å1.36ÅAromatic
C3C4sing1.48Å1.44Å
N3C4doub1.31Å1.34ÅAromatic
N3CA2sing1.36Å1.39ÅAromatic
C4O3sing1.35Å1.37ÅAromatic
CA2Csing1.47Å1.48Å
CA2C7doub1.36Å1.39ÅAromatic
OCdoub1.22Å1.22Å
COXTsing1.35Å1.23Å
O3C7sing1.34Å1.37ÅAromatic
NHsing1.01Å1.00Å
NH2sing1.01Å1.00Å
CA1H4sing1.09Å1.10Å
CA1H5sing1.09Å1.10Å
OXTHXTsing0.97Å0.95Å
C7H7sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NCA1C2113.9°109.5°
CA1NH109.5°110.9°
CA1NH2109.5°111.0°
NCA1H4108.3°109.4°
NCA1H5108.3°109.5°
CA1C2N2123.7°124.7°
CA1C2S1121.2°124.7°
C2CA1H4108.4°109.5°
C2CA1H5108.4°109.5°
N2C2S1115.1°110.6°
C2N2C3110.1°117.2°
C2S1C888.5°90.5°
N2C3C8114.3°114.0°
N2C3C4119.7°123.0°
S1C8C3111.4°107.9°
S1C8H8124.3°126.0°
C8C3C4126.0°123.0°
C3C8H8124.3°126.1°
C3C4N3126.8°125.6°
C3C4O3121.6°125.5°
C4N3CA2106.1°108.5°
N3C4O3111.6°109.0°
N3CA2C122.7°126.4°
N3CA2C7107.9°107.2°
C4O3C7106.2°108.2°
CCA2C7129.4°126.4°
CA2CO117.6°120.0°
CA2COXT117.4°120.0°
CA2C7O3108.3°107.2°
CA2C7H7125.9°126.4°
OCOXT125.0°120.0°
COXTHXT109.5°117.0°
O3C7H7125.8°126.4°
HNH2109.5°111.0°
H4CA1H5109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NCA1C2H4120.6°119.9°
NCA1C2H5120.6°120.1°
NCA1C2N2138.4°90.0°
NCA1C2S141.6°90.4°
CA1NHH2120.0°123.9°
NCA1H4H5118.0°120.0°
CA1C2N2S1180.0°179.7°
CA1C2N2C3172.6°179.9°
CA1C2S1C8176.1°180.0°
C2CA1NH180.0°56.1°
C2CA1NH260.0°180.0°
C2CA1H4H5118.0°120.0°
N2C2S1C83.8°0.3°
C2N2C3C88.1°0.0°
C2N2C3C4172.8°180.0°
N2C2CA1H4101.0°30.0°
N2C2CA1H517.7°149.9°
S1C2N2C37.3°0.2°
C2S1C8C31.0°0.3°
S1C2CA1H479.1°149.7°
S1C2CA1H5162.2°29.7°
C2S1C8H8179.0°179.9°
N2C3C8S15.3°0.3°
N2C3C8C4179.1°180.0°
N2C3C4N39.7°0.2°
N2C3C4O3168.9°180.0°
N2C3C8H8174.7°180.0°
S1C8C3H8180.0°179.7°
S1C8C3C4175.6°179.8°
C8C3C4N3171.3°179.8°
C8C3C4O310.1°0.1°
C3C4N3O3178.7°179.8°
C3C4N3CA2179.0°180.0°
C3C4O3C7178.9°179.8°
C4C3C8H84.4°0.0°
C4N3CA2C178.8°180.0°
C4N3CA2C70.4°0.1°
N3C4O3C70.2°0.4°
CA2N3C4O30.4°0.2°
N3CA2CC7179.0°180.0°
N3CA2CO110.6°180.0°
N3CA2COXT69.5°0.1°
N3CA2C7O30.3°0.3°
N3CA2C7H7179.7°179.9°
C4O3C7CA20.1°0.4°
C4O3C7H7180.0°179.8°
CA2COOXT179.8°180.0°
CCA2C7O3178.8°179.7°
CA2COXTHXT179.8°180.0°
CCA2C7H71.2°0.0°
C7CA2CO70.4°0.0°
C7CA2COXT109.5°180.0°
CA2C7O3H7180.0°179.8°
OCOXTHXT0.0°0.0°
HNCA1H459.4°176.1°
HNCA1H559.3°64.0°
H2NCA1H460.7°60.1°
H2NCA1H5179.4°59.9°

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PDB entries from 2024-10-09

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