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TOI

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1'C6'sing1.37Å1.34Å
N1'C2'sing1.35Å1.34Å
C2AC2'sing1.51Å1.51Å
C6'C5'doub1.35Å1.39Å
C2'N3'doub1.30Å1.35Å
C4AC4sing1.51Å1.51Å
C5'C35sing1.51Å1.52Å
C5'C4'sing1.47Å1.49Å
N3'C4'sing1.36Å1.35Å
C35N3sing1.46Å1.47Å
C4N3sing1.32Å1.41ÅAromatic
C4C5doub1.34Å1.35ÅAromatic
C4'N4'doub1.32Å1.35Å
C5AC5sing1.51Å1.52Å
C5AC5Bsing1.53Å1.53Å
N3C2doub1.29Å1.38ÅAromatic
O13P1doub1.48Å1.51Å
O1ICIdoub1.21Å1.25Å
O5GC5Bsing1.43Å1.43Å
O5GP1sing1.61Å1.62Å
C5S1sing1.76Å1.73ÅAromatic
O12P1sing1.61Å1.51Å
P1O11sing1.61Å1.62Å
CIO2Ising1.34Å1.25Å
CIC1Ising1.51Å1.51Å
C2S1sing1.71Å1.72ÅAromatic
C2C21sing1.51Å1.52Å
O21P2doub1.48Å1.51Å
O5C21sing1.43Å1.43Å
C2IC21sing1.53Å1.54Å
C2IC1Ising1.53Å1.54Å
C2IC3Ising1.50Å1.52Å
C21C3sing1.53Å1.53Å
O11P2sing1.61Å1.62Å
C1IC6Ising1.53Å1.53Å
C3IC4Idoub1.29Å1.33Å
P2O23sing1.61Å1.51Å
P2O22sing1.61Å1.51Å
C6IO3Ising1.43Å1.43Å
C6IC5Ising1.53Å1.52Å
C4IC5Ising1.50Å1.50Å
C3C41sing1.53Å1.53Å
C41C51sing1.51Å1.52Å
C5IO3Psing1.43Å1.43Å
O3PC2Psing1.36Å1.46Å
C51O3doub1.21Å1.25Å
C51O4sing1.34Å1.25Å
C2PC3Pdoub1.33Å1.32Å
C2PC1Psing1.47Å1.50Å
O1PC1Pdoub1.22Å1.25Å
C1PO2Psing1.35Å1.25Å
O2PH1sing0.97Å0.95Å
C3PH2sing1.08Å1.08Å
C3PH3sing1.08Å1.08Å
C5IH4sing1.09Å1.10Å
C6IH5sing1.09Å1.10Å
O3IH6sing0.97Å0.95Å
C1IH7sing1.09Å1.10Å
O2IH8sing0.97Å0.95Å
C4IH9sing1.08Å1.08Å
C3IH11sing1.08Å1.08Å
C2IH13sing1.09Å1.10Å
C3H14sing1.09Å1.10Å
C3H15sing1.09Å1.10Å
C41H16sing1.09Å1.10Å
C41H17sing1.09Å1.10Å
O4H18sing0.97Å0.95Å
O5H19sing0.97Å0.95Å
C35H20sing1.09Å1.10Å
C35H21sing1.09Å1.10Å
N4'H22sing0.97Å1.00Å
C2AH24sing1.09Å1.10Å
C2AH25sing1.09Å1.10Å
C2AH26sing1.09Å1.10Å
C6'H27sing1.08Å1.08Å
C4AH28sing1.09Å1.10Å
C4AH29sing1.09Å1.10Å
C4AH30sing1.09Å1.10Å
C5AH31sing1.09Å1.10Å
C5AH32sing1.09Å1.10Å
C5BH33sing1.09Å1.10Å
C5BH34sing1.09Å1.10Å
O12H35sing0.97Å0.95Å
O23H36sing0.97Å0.95Å
O22H37sing0.97Å0.95Å
N1'H10sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6'N1'C2'122.5°120.8°
N1'C6'C5'119.8°118.7°
N1'C6'H27120.1°120.7°
C6'N1'H10118.8°119.6°
N1'C2'C2A119.7°119.3°
N1'C2'N3'121.4°121.5°
C2'N1'H10118.7°119.6°
C2AC2'N3'118.9°119.2°
C2'C2AH24109.5°109.5°
C2'C2AH25109.4°109.5°
C2'C2AH26109.5°109.5°
C6'C5'C35120.1°121.2°
C6'C5'C4'117.1°117.6°
C5'C6'H27120.1°120.6°
C2'N3'C4'120.5°120.0°
C4AC4N3125.3°122.7°
C4AC4C5123.6°122.8°
C4C4AH28109.5°109.5°
C4C4AH29109.5°109.4°
C4C4AH30109.4°109.5°
C35C5'C4'122.8°121.2°
C5'C35N3113.2°109.5°
C5'C35H20108.5°109.5°
C5'C35H21108.5°109.4°
C5'C4'N3'118.7°118.3°
C5'C4'N4'121.8°120.8°
N3'C4'N4'119.5°120.9°
C35N3C4120.7°121.5°
C35N3C2123.5°121.5°
N3C35H20108.5°109.5°
N3C35H21108.5°109.5°
N3C4C5111.1°114.5°
C4N3C2115.8°117.1°
C4C5C5A124.6°126.0°
C4C5S1111.9°107.9°
C4'N4'H22112.0°120.0°
C5C5AC5B112.4°109.4°
C5AC5S1123.4°126.1°
C5C5AH31108.7°109.4°
C5C5AH32108.7°109.5°
C5AC5BO5G109.6°109.4°
C5BC5AH31108.8°109.5°
C5BC5AH32108.7°109.4°
C5AC5BH33109.4°109.4°
C5AC5BH34109.4°109.5°
N3C2S1108.4°110.2°
N3C2C21129.0°124.9°
O13P1O5G108.3°109.5°
O13P1O12118.4°109.5°
O13P1O11109.7°109.4°
O1ICIO2I121.9°120.0°
O1ICIC1I119.9°120.0°
C5BO5GP1121.8°123.0°
O5GC5BH33109.4°109.5°
O5GC5BH34109.4°109.5°
O5GP1O12107.6°109.5°
O5GP1O11104.7°109.5°
C5S1C292.7°90.3°
O12P1O11107.3°109.5°
P1O12H35109.5°114.0°
P1O11P2125.9°134.0°
O2ICIC1I118.2°120.0°
CIO2IH8109.5°117.0°
CIC1IC2I110.8°109.8°
CIC1IC6I105.7°109.6°
CIC1IH7107.6°109.6°
S1C2C21118.4°124.9°
C2C21O5110.3°109.5°
C2C21C2I111.4°109.5°
C2C21C3109.7°109.5°
O21P2O11106.6°109.5°
O21P2O23113.4°109.4°
O21P2O22114.2°109.5°
O5C21C2I107.2°109.5°
O5C21C3107.3°109.4°
C21O5H19109.5°114.0°
C21C2IC1I111.2°109.4°
C21C2IC3I109.2°109.4°
C2IC21C3110.9°109.4°
C21C2IH13107.3°109.3°
C1IC2IC3I114.1°110.2°
C2IC1IC6I117.8°108.5°
C2IC1IH7107.2°109.7°
C1IC2IH13107.2°109.4°
C2IC3IC4I122.5°124.2°
C2IC3IH11118.7°117.9°
C3IC2IH13107.5°109.2°
C21C3C41112.1°109.5°
C21C3H14108.8°109.5°
C21C3H15108.8°109.5°
O11P2O23104.9°109.5°
O11P2O22102.6°109.5°
C1IC6IO3I109.0°109.6°
C1IC6IC5I115.1°108.4°
C1IC6IH5107.4°109.8°
C6IC1IH7107.3°109.6°
C3IC4IC5I119.2°124.1°
C3IC4IH9120.4°118.0°
C4IC3IH11118.8°117.9°
O23P2O22113.7°109.5°
P2O23H36109.5°114.0°
P2O22H37109.5°114.0°
O3IC6IC5I109.0°109.7°
O3IC6IH5108.6°109.7°
C6IO3IH6109.5°114.0°
C6IC5IC4I107.3°110.0°
C6IC5IO3P106.8°109.3°
C6IC5IH4110.5°109.4°
C5IC6IH5107.6°109.7°
C4IC5IO3P109.5°109.3°
C4IC5IH4110.7°109.4°
C5IC4IH9120.4°117.9°
C3C41C51112.1°109.5°
C41C3H14108.8°109.5°
C41C3H15108.8°109.4°
C3C41H16108.8°109.5°
C3C41H17108.8°109.5°
C41C51O3119.1°120.0°
C41C51O4118.8°120.0°
C51C41H16108.8°109.5°
C51C41H17108.8°109.4°
C5IO3PC2P115.3°117.0°
O3PC5IH4111.9°109.4°
O3PC2PC3P121.2°120.0°
O3PC2PC1P118.3°120.0°
O3C51O4122.1°120.0°
C51O4H18109.5°117.0°
C3PC2PC1P120.5°120.0°
C2PC3PH2120.0°120.0°
C2PC3PH3120.0°119.9°
C2PC1PO1P118.4°120.0°
C2PC1PO2P119.7°120.0°
O1PC1PO2P121.9°120.0°
C1PO2PH1109.5°117.0°
H2C3PH3120.0°120.1°
H14C3H15109.5°109.5°
H16C41H17109.5°109.4°
H20C35H21109.5°109.5°
H24C2AH25109.5°109.4°
H24C2AH26109.5°109.5°
H25C2AH26109.5°109.5°
H28C4AH29109.5°109.5°
H28C4AH30109.5°109.5°
H29C4AH30109.4°109.5°
H31C5AH32109.5°109.5°
H33C5BH34109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C6'N1'C2'H10180.0°179.4°
C6'N1'C2'C2A179.9°164.7°
N1'C6'C5'H27180.0°179.4°
C6'N1'C2'N3'0.1°15.3°
N1'C6'C5'C35179.5°179.6°
N1'C6'C5'C4'0.9°0.8°
N1'C2'C2AN3'179.9°180.0°
C2'N1'C6'C5'0.5°14.9°
N1'C2'N3'C4'0.2°0.3°
N1'C2'C2AH24180.0°180.0°
N1'C2'C2AH2559.9°60.0°
N1'C2'C2AH2660.0°60.0°
C2'N1'C6'H27179.5°165.8°
C2AC2'N3'C4'179.9°179.7°
C2'C2AH24H25120.0°120.0°
C2'C2AH24H26120.0°120.1°
C2'C2AH25H26120.0°120.0°
C2AC2'N1'H100.1°14.7°
C6'C5'C35C4'178.6°179.6°
C6'C5'C4'N3'0.9°13.3°
C6'C5'C35N3117.9°98.1°
C6'C5'C4'N4'179.6°166.7°
C6'C5'C35H20121.6°22.0°
C6'C5'C35H212.6°141.9°
C5'C6'N1'H10179.5°165.7°
C2'N3'C4'C5'0.5°13.6°
C2'N3'C4'N4'180.0°166.4°
N3'C2'C2AH240.0°0.0°
N3'C2'C2AH25120.0°120.0°
N3'C2'C2AH26120.0°120.0°
N3'C2'N1'H10179.9°165.3°
C4AC4N3C350.4°0.0°
C4AC4N3C5179.4°179.7°
C4AC4C5C5A1.0°0.4°
C4AC4N3C2179.5°180.0°
C4AC4C5S1179.9°179.9°
C4C4AH28H29120.0°120.0°
C4C4AH28H30120.0°120.0°
C4C4AH29H30119.9°120.0°
C35C5'C4'N3'179.5°166.4°
C5'C35N3H20120.5°120.0°
C5'C35N3H21120.5°119.9°
C5'C35N3C476.4°98.0°
C35C5'C4'N4'1.0°13.7°
C5'C35N3C2104.6°82.1°
C5'C35H20H21118.3°119.9°
C35C5'C6'H270.5°0.2°
C5'C4'N3'N4'179.5°180.0°
C4'C5'C35N363.5°81.6°
C4'C5'C35H2057.0°158.4°
C4'C5'C35H21176.0°38.4°
C5'C4'N4'H22179.5°174.9°
C4'C5'C6'H27179.1°179.9°
N3'C4'N4'H220.0°5.0°
C35N3C4C2179.1°179.9°
C35N3C4C5179.9°179.6°
C35N3C2S1180.0°180.0°
C35N3C2C2123.7°0.4°
N3C35H20H21118.3°120.1°
N3C4C5C5A179.6°180.0°
N3C4C5S10.7°0.5°
C4N3C2S10.9°0.1°
C4N3C2C21155.3°179.7°
C4N3C35H20163.0°142.0°
C4N3C35H2144.1°22.0°
N3C4C4AH2889.7°100.2°
N3C4C4AH29150.3°139.8°
N3C4C4AH3030.4°19.8°
C4C5C5AS1178.8°179.4°
C4C5C5AC5B120.0°90.0°
C5C4N3C21.1°0.3°
C4C5S1C20.1°0.4°
C5C4C4AH2889.7°79.4°
C5C4C4AH2930.3°40.6°
C5C4C4AH30150.3°160.6°
C4C5C5AH31119.5°150.0°
C4C5C5AH320.4°30.0°
C5C5AC5BH31120.4°119.9°
C5C5AC5BH32120.4°120.0°
C5C5AC5BO5G178.7°180.0°
C5AC5S1C2179.1°179.9°
C5C5AH31H32118.6°120.1°
C5C5AC5BH3361.3°60.0°
C5C5AC5BH3458.6°60.0°
C5AC5BO5GH33120.0°120.0°
C5AC5BO5GH34120.0°120.0°
C5AC5BO5GP1174.4°180.0°
C5BC5AC5S161.2°90.6°
C5BC5AH31H32118.7°120.0°
C5AC5BH33H34119.9°120.0°
N3C2S1C50.5°0.3°
N3C2S1C21159.2°179.7°
N3C2C21O553.6°62.7°
N3C2C21C2I65.3°177.2°
N3C2C21C3171.6°57.2°
C2N3C35H2016.0°37.9°
C2N3C35H21134.9°157.9°
O13P1O5GC5B171.0°55.1°
O13P1O5GO12129.0°120.0°
O13P1O5GO11117.0°119.9°
O13P1O12O11124.8°120.0°
O13P1O11P244.4°45.0°
O13P1O12H350.0°180.0°
O1ICIO2IC1I180.0°179.9°
O1ICIC1IC2I14.8°28.0°
O1ICIC1IC6I143.5°91.0°
O1ICIC1IH7102.1°148.6°
O1ICIO2IH80.0°0.0°
C5BO5GP1O1242.0°64.9°
C5BO5GP1O1172.0°175.0°
O5GC5BC5AH3158.2°60.0°
O5GC5BC5AH3260.9°60.0°
O5GC5BH33H34120.0°120.1°
O5GP1O12O11112.2°120.0°
O5GP1O11P271.7°165.0°
P1O5GC5BH3365.6°60.1°
P1O5GC5BH3454.4°60.0°
O5GP1O12H35123.0°60.0°
C5S1C2C21158.7°179.9°
S1C5C5AH3159.3°29.4°
S1C5C5AH32178.4°149.4°
O12P1O11P2174.2°75.0°
P1O11P2O2116.5°45.0°
P1O11P2O23104.1°75.0°
P1O11P2O22136.9°165.0°
O11P1O12H35124.8°60.0°
O2ICIC1IC2I165.2°152.0°
O2ICIC1IC6I36.5°88.9°
O2ICIC1IH777.9°31.5°
CIC1IC2IC21112.1°70.5°
CIC1IC2IC6I121.8°119.8°
CIC1IC2IH7117.2°120.5°
CIC1IC2IC3I123.8°169.2°
CIC1IC6IH7114.6°120.4°
CIC1IC6IO3I85.6°53.0°
CIC1IC6IC5I151.6°172.7°
CIC1IC6IH531.9°67.6°
C1ICIO2IH8180.0°180.0°
CIC1IC2IH134.9°49.1°
S1C2C21O5152.1°116.9°
S1C2C21C2I89.0°3.2°
S1C2C21C334.1°123.2°
C2C21O5C2I121.4°120.1°
C2C21O5C3119.5°120.0°
C2C21C2IC3122.5°120.0°
C2C21C2IC1I153.3°177.5°
C2C21C2IC3I79.9°61.8°
C2C21C3C4191.2°43.8°
C2C21C2IH1336.4°57.7°
C2C21C3H14148.4°76.2°
C2C21C3H1529.2°163.8°
C2C21O5H19180.0°54.2°
O21P2O11O23120.6°120.0°
O21P2O11O22120.4°120.0°
O21P2O23O22132.8°120.0°
O21P2O23H360.0°180.0°
O21P2O22H370.0°60.0°
O5C21C2IC3116.8°119.9°
O5C21C2IC1I32.7°57.4°
O5C21C2IC3I159.4°178.1°
O5C21C3C4128.6°163.8°
O5C21C2IH1384.3°62.3°
O5C21C3H1491.8°43.8°
O5C21C3H15149.0°76.2°
C21C2IC1IC3I124.0°120.3°
C21C2IC1IH13117.0°119.7°
C21C2IC3IH13116.1°119.6°
C21C2IC1IC6I126.0°169.7°
C21C2IC3IC4I129.1°137.4°
C2IC21C3C41145.4°76.2°
C21C2IC1IH75.0°50.0°
C21C2IC3IH1150.9°42.7°
C2IC21C3H1425.0°163.8°
C2IC21C3H1594.2°43.8°
C2IC21O5H1958.6°65.8°
C1IC2IC3IH13118.8°120.1°
C1IC2IC21C384.2°62.6°
C2IC1IC6IH7121.0°119.7°
C1IC2IC3IC4I4.0°17.1°
C2IC1IC6IO3I150.0°172.9°
C2IC1IC6IC5I27.2°67.4°
C2IC1IC6IH592.5°52.3°
C1IC2IC3IH11176.0°163.0°
C3IC2IC21C342.6°58.2°
C3IC2IC1IC6I2.0°49.4°
C2IC3IC4IH11180.0°179.9°
C2IC3IC4IC5I32.6°0.6°
C3IC2IC1IH7119.0°70.3°
C2IC3IC4IH9147.4°179.6°
C21C3C41H14120.4°120.0°
C21C3C41H15120.4°120.0°
C21C3C41C51164.0°174.2°
C3C21C2IH13158.9°177.7°
C21C3H14H15118.8°120.0°
C21C3C41H1675.6°65.7°
C21C3C41H1743.6°54.3°
C3C21O5H1960.5°174.2°
O11P2O23O22111.2°120.0°
O11P2O23H36116.0°60.1°
O11P2O22H37115.0°180.0°
C1IC6IO3IC5I126.4°118.9°
C1IC6IO3IH5116.7°120.6°
C1IC6IC5IH5119.6°119.8°
C1IC6IC5IC4I50.3°49.5°
C1IC6IC5IO3P167.7°169.6°
C1IC6IC5IH470.4°70.7°
C1IC6IO3IH6180.0°178.9°
C6IC1IC2IH13117.0°70.7°
C3IC4IC5IC6I55.0°17.3°
C3IC4IC5IH9180.0°179.8°
C3IC4IC5IO3P170.6°137.4°
C3IC4IC5IH465.6°102.9°
C4IC3IC2IH13114.8°103.0°
O23P2O22H37132.4°59.9°
O22P2O23H36132.7°60.0°
O3IC6IC5IH5117.6°120.5°
O3IC6IC5IC4I173.1°169.2°
O3IC6IC5IO3P69.5°70.7°
O3IC6IC5IH452.4°49.0°
O3IC6IC1IH729.1°67.4°
C6IC5IC4IO3P115.6°120.1°
C6IC5IC4IH4120.6°120.2°
C6IC5IO3PH4121.0°119.7°
C6IC5IO3PC2P144.2°155.3°
C5IC6IO3IH653.6°60.0°
C5IC6IC1IH793.8°52.3°
C6IC5IC4IH9125.0°162.8°
C4IC5IO3PH4123.1°119.8°
C4IC5IO3PC2P99.9°84.2°
C4IC5IC6IH569.3°70.3°
C5IC4IC3IH11147.4°179.5°
C3C41C51H16120.4°120.1°
C3C41C51H17120.4°120.0°
C3C41C51O3107.4°5.2°
C3C41C51O473.3°174.8°
C41C3H14H15118.8°119.9°
C3C41H16H17118.8°120.0°
C41C51O3O4179.4°180.0°
C51C41C3H1443.6°54.2°
C51C41C3H1575.6°65.8°
C51C41H16H17118.8°120.0°
C41C51O4H18179.3°180.0°
C5IO3PC2PC3P12.1°2.1°
C5IO3PC2PC1P168.2°177.9°
O3PC5IC6IH548.1°49.8°
O3PC5IC4IH99.4°42.8°
O3PC2PC3PC1P179.8°180.0°
O3PC2PC1PO1P0.2°0.0°
O3PC2PC1PO2P179.9°180.0°
O3PC2PC3PH2179.7°6.5°
O3PC2PC3PH30.2°173.5°
C2PO3PC5IH423.2°35.6°
O3C51C41H1613.1°114.9°
O3C51C41H17132.2°125.2°
O3C51O4H180.0°0.0°
O4C51C41H16166.3°65.2°
O4C51C41H1747.1°54.8°
C3PC2PC1PO1P180.0°180.0°
C3PC2PC1PO2P0.1°0.0°
C2PC3PH2H3180.0°179.9°
C2PC1PO1PO2P179.9°180.0°
C2PC1PO2PH1180.0°180.0°
C1PC2PC3PH20.0°173.5°
C1PC2PC3PH3180.0°6.4°
O1PC1PO2PH10.0°0.0°
H4C5IC6IH5170.0°169.5°
H4C5IC4IH9114.4°77.0°
H5C6IO3IH663.3°60.5°
H5C6IC1IH7146.5°172.0°
H7C1IC2IH13122.0°169.7°
H9C4IC3IH1132.6°0.3°
H11C3IC2IH1365.2°76.9°
H14C3C41H16164.0°174.2°
H14C3C41H1776.8°65.8°
H15C3C41H1644.8°54.3°
H15C3C41H17164.0°174.3°
H24C2AH25H26120.0°120.0°
H27C6'N1'H100.5°13.7°
H28C4AH29H30120.0°120.0°
H31C5AC5BH33178.3°180.0°
H31C5AC5BH3461.8°60.0°
H32C5AC5BH3359.1°60.0°
H32C5AC5BH34179.1°180.0°

223790

PDB entries from 2024-08-14

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