Obsolete: TNR
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
OXT | C | sing | 1.34Å | 1.23Å | |
OXT | HB | sing | 0.97Å | 0.95Å | |
C | O | doub | 1.21Å | 1.23Å | |
C | CA | sing | 1.51Å | 1.54Å | |
CA | N | sing | 1.47Å | 1.46Å | |
CA | CB | sing | 1.53Å | 1.53Å | |
CA | HCA | sing | 1.09Å | 1.11Å | |
N | H | sing | 1.01Å | 1.02Å | |
N | H2 | sing | 1.01Å | 1.02Å | |
CB | O1 | sing | 1.43Å | 1.42Å | |
CB | HB2 | sing | 1.09Å | 1.11Å | |
CB | HB3 | sing | 1.09Å | 1.11Å | |
O1 | C1 | sing | 1.43Å | 1.43Å | |
C1 | C2 | sing | 1.53Å | 1.52Å | |
C1 | O5 | sing | 1.43Å | 1.42Å | |
C1 | HC1 | sing | 1.09Å | 1.11Å | |
C2 | N2 | sing | 1.46Å | 1.44Å | |
C2 | C3 | sing | 1.53Å | 1.51Å | |
C2 | HC2 | sing | 1.09Å | 1.12Å | |
N2 | C7 | sing | 1.35Å | 1.32Å | |
N2 | HN2 | sing | 0.97Å | 1.02Å | |
C7 | C8 | sing | 1.51Å | 1.50Å | |
C7 | O7 | doub | 1.21Å | 1.21Å | |
C8 | HC81 | sing | 1.09Å | 1.12Å | |
C8 | HC82 | sing | 1.09Å | 1.11Å | |
C8 | HC83 | sing | 1.09Å | 1.11Å | |
C3 | O3 | sing | 1.43Å | 1.42Å | |
C3 | C4 | sing | 1.53Å | 1.51Å | |
C3 | HC3 | sing | 1.09Å | 1.11Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
C4 | O4 | sing | 1.43Å | 1.43Å | |
C4 | C5 | sing | 1.53Å | 1.52Å | |
C4 | HC4 | sing | 1.09Å | 1.12Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
C5 | O5 | sing | 1.43Å | 1.44Å | |
C5 | C6 | sing | 1.53Å | 1.52Å | |
C5 | HC5 | sing | 1.09Å | 1.11Å | |
C6 | O6 | sing | 1.43Å | 1.43Å | |
C6 | HC61 | sing | 1.09Å | 1.12Å | |
C6 | HC62 | sing | 1.09Å | 1.12Å | |
O6 | HO6 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C | OXT | HB | 119.2° | 120.0° |
OXT | C | O | 119.2° | 120.0° |
OXT | C | CA | 120.4° | 120.0° |
O | C | CA | 120.4° | 120.0° |
C | CA | N | 111.7° | 109.4° |
C | CA | CB | 111.5° | 109.5° |
C | CA | HCA | 106.7° | 109.5° |
N | CA | CB | 109.9° | 109.5° |
N | CA | HCA | 108.4° | 109.5° |
CA | N | H | 111.7° | 106.8° |
CA | N | H2 | 111.4° | 106.7° |
CB | CA | HCA | 108.5° | 109.5° |
CA | CB | O1 | 111.5° | 109.5° |
CA | CB | HB2 | 111.5° | 109.5° |
CA | CB | HB3 | 111.5° | 109.5° |
H | N | H2 | 111.3° | 106.6° |
O1 | CB | HB2 | 111.4° | 109.5° |
O1 | CB | HB3 | 111.4° | 109.4° |
CB | O1 | C1 | 118.9° | 106.8° |
HB2 | CB | HB3 | 98.9° | 109.5° |
O1 | C1 | C2 | 108.5° | 109.2° |
O1 | C1 | O5 | 109.9° | 109.4° |
O1 | C1 | HC1 | 110.4° | 109.4° |
C2 | C1 | O5 | 111.0° | 109.8° |
C2 | C1 | HC1 | 109.2° | 109.5° |
C1 | C2 | N2 | 106.4° | 109.6° |
C1 | C2 | C3 | 109.5° | 109.1° |
C1 | C2 | HC2 | 112.2° | 109.5° |
O5 | C1 | HC1 | 107.9° | 109.4° |
C1 | O5 | C5 | 114.0° | 107.8° |
N2 | C2 | C3 | 111.5° | 109.6° |
N2 | C2 | HC2 | 110.2° | 109.4° |
C2 | N2 | C7 | 119.9° | 120.1° |
C2 | N2 | HN2 | 124.2° | 119.9° |
C3 | C2 | HC2 | 107.1° | 109.6° |
C2 | C3 | O3 | 108.2° | 109.6° |
C2 | C3 | C4 | 107.5° | 108.7° |
C2 | C3 | HC3 | 111.3° | 109.6° |
C7 | N2 | HN2 | 115.9° | 120.0° |
N2 | C7 | C8 | 116.6° | 120.0° |
N2 | C7 | O7 | 120.4° | 120.0° |
C8 | C7 | O7 | 123.1° | 120.0° |
C7 | C8 | HC81 | 116.6° | 109.5° |
C7 | C8 | HC82 | 109.6° | 109.4° |
C7 | C8 | HC83 | 109.6° | 109.5° |
HC81 | C8 | HC82 | 109.6° | 109.4° |
HC81 | C8 | HC83 | 109.7° | 109.5° |
HC82 | C8 | HC83 | 100.6° | 109.6° |
O3 | C3 | C4 | 108.4° | 109.8° |
O3 | C3 | HC3 | 110.4° | 109.6° |
C3 | O3 | HO3 | 108.2° | 106.8° |
C4 | C3 | HC3 | 111.0° | 109.6° |
C3 | C4 | O4 | 107.1° | 109.5° |
C3 | C4 | C5 | 110.9° | 109.0° |
C3 | C4 | HC4 | 109.9° | 109.5° |
O4 | C4 | C5 | 108.6° | 109.7° |
O4 | C4 | HC4 | 112.1° | 109.5° |
C4 | O4 | HO4 | 107.1° | 106.8° |
C5 | C4 | HC4 | 108.3° | 109.5° |
C4 | C5 | O5 | 113.2° | 109.8° |
C4 | C5 | C6 | 108.7° | 109.4° |
C4 | C5 | HC5 | 107.0° | 109.4° |
O5 | C5 | C6 | 107.7° | 109.4° |
O5 | C5 | HC5 | 107.9° | 109.4° |
C6 | C5 | HC5 | 112.5° | 109.5° |
C5 | C6 | O6 | 108.3° | 109.4° |
C5 | C6 | HC61 | 112.6° | 109.5° |
C5 | C6 | HC62 | 112.7° | 109.5° |
O6 | C6 | HC61 | 112.6° | 109.4° |
O6 | C6 | HC62 | 112.6° | 109.5° |
C6 | O6 | HO6 | 108.3° | 106.8° |
HC61 | C6 | HC62 | 97.8° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
OXT | C | O | CA | 178.9° | 179.9° |
OXT | C | CA | N | 20.8° | 150.0° |
OXT | C | CA | CB | 102.6° | 90.0° |
OXT | C | CA | HCA | 139.1° | 30.0° |
HB | OXT | C | O | 180.0° | 0.0° |
HB | OXT | C | CA | 1.1° | 179.9° |
O | C | CA | N | 158.1° | 29.9° |
O | C | CA | CB | 78.5° | 90.1° |
O | C | CA | HCA | 39.9° | 149.9° |
C | CA | N | CB | 124.3° | 120.0° |
C | CA | N | HCA | 117.2° | 120.0° |
C | CA | CB | HCA | 117.2° | 120.0° |
C | CA | N | H | 180.0° | 60.0° |
C | CA | N | H2 | 54.8° | 173.8° |
C | CA | CB | O1 | 40.9° | 180.0° |
C | CA | CB | HB2 | 84.3° | 60.0° |
C | CA | CB | HB3 | 166.1° | 60.0° |
N | CA | CB | HCA | 118.4° | 120.0° |
CA | N | H | H2 | 125.2° | 113.8° |
N | CA | CB | O1 | 83.5° | 60.0° |
N | CA | CB | HB2 | 151.3° | 180.0° |
N | CA | CB | HB3 | 41.8° | 60.0° |
CB | CA | N | H | 55.7° | 60.0° |
CB | CA | N | H2 | 69.5° | 53.8° |
CA | CB | O1 | HB2 | 125.3° | 120.1° |
CA | CB | O1 | HB3 | 125.3° | 120.0° |
CA | CB | HB2 | HB3 | 117.4° | 120.0° |
CA | CB | O1 | C1 | 146.7° | 180.0° |
HCA | CA | N | H | 62.8° | 180.0° |
HCA | CA | N | H2 | 172.0° | 66.3° |
HCA | CA | CB | O1 | 158.2° | 60.0° |
HCA | CA | CB | HB2 | 32.9° | 60.0° |
HCA | CA | CB | HB3 | 76.6° | 180.0° |
O1 | CB | HB2 | HB3 | 117.3° | 119.9° |
CB | O1 | C1 | C2 | 151.1° | 179.8° |
CB | O1 | C1 | O5 | 87.4° | 60.0° |
CB | O1 | C1 | HC1 | 31.5° | 59.9° |
HB2 | CB | O1 | C1 | 21.4° | 60.0° |
HB3 | CB | O1 | C1 | 88.0° | 60.0° |
O1 | C1 | C2 | O5 | 120.8° | 120.0° |
O1 | C1 | C2 | HC1 | 120.4° | 119.8° |
O1 | C1 | O5 | HC1 | 120.4° | 119.9° |
O1 | C1 | C2 | N2 | 60.1° | 61.1° |
O1 | C1 | C2 | C3 | 60.5° | 58.9° |
O1 | C1 | C2 | HC2 | 179.3° | 178.9° |
O1 | C1 | O5 | C5 | 65.2° | 52.4° |
C2 | C1 | O5 | HC1 | 119.6° | 120.3° |
C1 | C2 | N2 | C3 | 119.3° | 119.7° |
C1 | C2 | N2 | HC2 | 121.9° | 120.1° |
C1 | C2 | C3 | HC2 | 121.9° | 119.9° |
C1 | C2 | N2 | C7 | 131.4° | 90.2° |
C1 | C2 | N2 | HN2 | 48.7° | 89.9° |
C1 | C2 | C3 | O3 | 177.4° | 173.6° |
C1 | C2 | C3 | C4 | 60.6° | 53.6° |
C1 | C2 | C3 | HC3 | 61.2° | 66.1° |
C2 | C1 | O5 | C5 | 54.8° | 67.4° |
O5 | C1 | C2 | N2 | 179.1° | 178.9° |
O5 | C1 | C2 | C3 | 60.3° | 61.1° |
O5 | C1 | C2 | HC2 | 58.5° | 58.9° |
C1 | O5 | C5 | C4 | 50.9° | 67.5° |
C1 | O5 | C5 | C6 | 171.1° | 172.4° |
C1 | O5 | C5 | HC5 | 67.3° | 52.5° |
HC1 | C1 | C2 | N2 | 60.3° | 58.7° |
HC1 | C1 | C2 | C3 | 179.1° | 178.7° |
HC1 | C1 | C2 | HC2 | 60.3° | 61.3° |
HC1 | C1 | O5 | C5 | 174.4° | 172.3° |
N2 | C2 | C3 | HC2 | 120.6° | 120.1° |
C2 | N2 | C7 | HN2 | 180.0° | 180.0° |
C2 | N2 | C7 | C8 | 178.2° | 180.0° |
C2 | N2 | C7 | O7 | 1.9° | 0.0° |
N2 | C2 | C3 | O3 | 65.1° | 66.5° |
N2 | C2 | C3 | C4 | 178.1° | 173.6° |
N2 | C2 | C3 | HC3 | 56.3° | 53.9° |
C3 | C2 | N2 | C7 | 109.3° | 150.1° |
C3 | C2 | N2 | HN2 | 70.6° | 29.9° |
C2 | C3 | O3 | C4 | 116.2° | 119.3° |
C2 | C3 | O3 | HC3 | 122.0° | 120.3° |
C2 | C3 | C4 | HC3 | 121.9° | 119.7° |
C2 | C3 | O3 | HO3 | 179.9° | 180.0° |
C2 | C3 | C4 | O4 | 62.0° | 66.3° |
C2 | C3 | C4 | C5 | 56.3° | 53.7° |
C2 | C3 | C4 | HC4 | 176.0° | 173.5° |
HC2 | C2 | N2 | C7 | 9.5° | 30.0° |
HC2 | C2 | N2 | HN2 | 170.6° | 150.0° |
HC2 | C2 | C3 | O3 | 55.5° | 53.6° |
HC2 | C2 | C3 | C4 | 61.3° | 66.3° |
HC2 | C2 | C3 | HC3 | 176.9° | 174.0° |
N2 | C7 | C8 | O7 | 179.9° | 179.9° |
N2 | C7 | C8 | HC81 | 180.0° | 180.0° |
N2 | C7 | C8 | HC82 | 54.8° | 60.1° |
N2 | C7 | C8 | HC83 | 54.7° | 60.0° |
HN2 | N2 | C7 | C8 | 1.9° | 0.0° |
HN2 | N2 | C7 | O7 | 178.1° | 180.0° |
C7 | C8 | HC81 | HC82 | 125.2° | 119.9° |
C7 | C8 | HC81 | HC83 | 125.3° | 120.0° |
C7 | C8 | HC82 | HC83 | 115.4° | 120.1° |
O7 | C7 | C8 | HC81 | 0.0° | 0.0° |
O7 | C7 | C8 | HC82 | 125.2° | 119.9° |
O7 | C7 | C8 | HC83 | 125.3° | 119.9° |
HC81 | C8 | HC82 | HC83 | 115.5° | 120.0° |
O3 | C3 | C4 | HC3 | 121.4° | 120.5° |
O3 | C3 | C4 | O4 | 54.6° | 53.6° |
O3 | C3 | C4 | C5 | 173.0° | 173.6° |
O3 | C3 | C4 | HC4 | 67.3° | 66.6° |
C4 | C3 | O3 | HO3 | 63.7° | 60.7° |
C3 | C4 | O4 | C5 | 119.8° | 119.6° |
C3 | C4 | O4 | HC4 | 120.6° | 120.2° |
C3 | C4 | C5 | HC4 | 120.7° | 119.9° |
C3 | C4 | O4 | HO4 | 180.0° | 180.0° |
C3 | C4 | C5 | O5 | 51.7° | 61.2° |
C3 | C4 | C5 | C6 | 171.3° | 178.7° |
C3 | C4 | C5 | HC5 | 67.1° | 58.8° |
HC3 | C3 | O3 | HO3 | 58.1° | 59.7° |
HC3 | C3 | C4 | O4 | 176.0° | 174.0° |
HC3 | C3 | C4 | C5 | 65.6° | 66.0° |
HC3 | C3 | C4 | HC4 | 54.1° | 53.9° |
O4 | C4 | C5 | HC4 | 122.0° | 120.2° |
O4 | C4 | C5 | O5 | 65.7° | 58.7° |
O4 | C4 | C5 | C6 | 53.9° | 61.4° |
O4 | C4 | C5 | HC5 | 175.6° | 178.7° |
C5 | C4 | O4 | HO4 | 60.3° | 60.4° |
C4 | C5 | O5 | C6 | 120.2° | 120.0° |
C4 | C5 | O5 | HC5 | 118.2° | 120.0° |
C4 | C5 | C6 | HC5 | 118.2° | 119.8° |
C4 | C5 | C6 | O6 | 156.3° | 180.0° |
C4 | C5 | C6 | HC61 | 31.1° | 60.1° |
C4 | C5 | C6 | HC62 | 78.4° | 60.0° |
HC4 | C4 | O4 | HO4 | 59.4° | 59.8° |
HC4 | C4 | C5 | O5 | 172.3° | 178.9° |
HC4 | C4 | C5 | C6 | 68.0° | 58.9° |
HC4 | C4 | C5 | HC5 | 53.6° | 61.0° |
O5 | C5 | C6 | HC5 | 118.8° | 119.9° |
O5 | C5 | C6 | O6 | 80.7° | 59.7° |
O5 | C5 | C6 | HC61 | 154.0° | 179.7° |
O5 | C5 | C6 | HC62 | 44.6° | 60.3° |
C5 | C6 | O6 | HC61 | 125.3° | 120.0° |
C5 | C6 | O6 | HC62 | 125.3° | 120.1° |
C5 | C6 | HC61 | HC62 | 118.6° | 120.1° |
C5 | C6 | O6 | HO6 | 180.0° | 180.0° |
HC5 | C5 | C6 | O6 | 38.1° | 60.2° |
HC5 | C5 | C6 | HC61 | 87.1° | 59.7° |
HC5 | C5 | C6 | HC62 | 163.4° | 179.8° |
O6 | C6 | HC61 | HC62 | 118.5° | 119.9° |
HC61 | C6 | O6 | HO6 | 54.7° | 60.0° |
HC62 | C6 | O6 | HO6 | 54.7° | 60.0° |