TNQ
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O2 | C1 | doub | 1.21Å | 1.24Å | |
O3 | C1 | sing | 1.34Å | 1.26Å | |
C1 | C2 | sing | 1.51Å | 1.47Å | |
N1 | C2 | sing | 1.47Å | 1.28Å | |
N1 | CH2 | sing | 1.40Å | 1.40Å | |
O7 | CZ2 | sing | 1.36Å | 1.35Å | |
CH2 | CZ2 | doub | 1.39Å | 1.48Å | Aromatic |
CH2 | CZ3 | sing | 1.39Å | 1.40Å | Aromatic |
CZ2 | CE2 | sing | 1.39Å | 1.47Å | Aromatic |
CZ3 | CE3 | doub | 1.37Å | 1.41Å | Aromatic |
CE2 | NE1 | sing | 1.38Å | 1.34Å | Aromatic |
CE2 | CD2 | doub | 1.41Å | 1.48Å | Aromatic |
CE3 | CD2 | sing | 1.40Å | 1.39Å | Aromatic |
NE1 | CD1 | sing | 1.37Å | 1.37Å | Aromatic |
CD2 | CG | sing | 1.47Å | 1.48Å | Aromatic |
CD1 | CG | doub | 1.34Å | 1.39Å | Aromatic |
CG | CB | sing | 1.51Å | 1.52Å | |
CB | CA | sing | 1.53Å | 1.53Å | |
N | CA | sing | 1.47Å | 1.49Å | |
CA | C | sing | 1.51Å | 1.50Å | |
C | O | doub | 1.21Å | 1.26Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | H4 | sing | 1.09Å | 1.10Å | |
CB | H6 | sing | 1.09Å | 1.10Å | |
CB | H7 | sing | 1.09Å | 1.10Å | |
CD1 | H8 | sing | 1.08Å | 1.08Å | |
NE1 | H9 | sing | 0.97Å | 1.00Å | |
CE3 | H10 | sing | 1.08Å | 1.08Å | |
CZ3 | H11 | sing | 1.08Å | 1.08Å | |
C2 | H12 | sing | 1.09Å | 1.10Å | |
C2 | H13 | sing | 1.09Å | 1.10Å | |
N1 | H14 | sing | 0.97Å | 1.00Å | |
O3 | H15 | sing | 0.97Å | 0.95Å | |
O7 | H16 | sing | 0.97Å | 0.95Å | |
C | OXT | sing | 1.34Å | 1.34Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O2 | C1 | O3 | 121.8° | 120.0° |
O2 | C1 | C2 | 113.3° | 120.0° |
O3 | C1 | C2 | 124.8° | 120.0° |
C1 | O3 | H15 | 109.5° | 117.0° |
C1 | C2 | N1 | 124.4° | 109.5° |
C1 | C2 | H12 | 105.6° | 109.5° |
C1 | C2 | H13 | 105.6° | 109.5° |
C2 | N1 | CH2 | 111.1° | 120.0° |
N1 | C2 | H12 | 105.6° | 109.5° |
N1 | C2 | H13 | 105.6° | 109.4° |
C2 | N1 | H14 | 109.0° | 120.0° |
N1 | CH2 | CZ2 | 117.9° | 119.7° |
N1 | CH2 | CZ3 | 121.8° | 119.8° |
CH2 | N1 | H14 | 109.1° | 120.0° |
O7 | CZ2 | CH2 | 121.7° | 120.2° |
O7 | CZ2 | CE2 | 120.4° | 120.2° |
CZ2 | O7 | H16 | 109.5° | 114.0° |
CZ2 | CH2 | CZ3 | 120.1° | 120.5° |
CH2 | CZ2 | CE2 | 118.0° | 119.6° |
CH2 | CZ3 | CE3 | 122.2° | 120.5° |
CH2 | CZ3 | H11 | 118.9° | 119.8° |
CZ2 | CE2 | NE1 | 133.7° | 133.4° |
CZ2 | CE2 | CD2 | 117.7° | 119.4° |
CZ3 | CE3 | CD2 | 120.4° | 119.9° |
CZ3 | CE3 | H10 | 119.8° | 120.1° |
CE3 | CZ3 | H11 | 118.9° | 119.7° |
NE1 | CE2 | CD2 | 108.6° | 107.2° |
CE2 | NE1 | CD1 | 109.4° | 109.8° |
CE2 | NE1 | H9 | 125.3° | 125.1° |
CE2 | CD2 | CE3 | 121.5° | 120.0° |
CE2 | CD2 | CG | 105.1° | 106.1° |
CE3 | CD2 | CG | 133.3° | 133.9° |
CD2 | CE3 | H10 | 119.8° | 120.0° |
NE1 | CD1 | CG | 112.7° | 109.9° |
NE1 | CD1 | H8 | 123.7° | 125.1° |
CD1 | NE1 | H9 | 125.3° | 125.1° |
CD2 | CG | CD1 | 104.1° | 107.0° |
CD2 | CG | CB | 129.4° | 126.5° |
CD1 | CG | CB | 126.4° | 126.4° |
CG | CD1 | H8 | 123.6° | 125.0° |
CG | CB | CA | 111.8° | 109.4° |
CG | CB | H6 | 108.9° | 109.4° |
CG | CB | H7 | 108.9° | 109.5° |
CB | CA | N | 109.7° | 109.5° |
CB | CA | C | 110.7° | 109.5° |
CB | CA | H4 | 108.9° | 109.5° |
CA | CB | H6 | 108.9° | 109.4° |
CA | CB | H7 | 108.9° | 109.5° |
N | CA | C | 108.6° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | H4 | 109.6° | 109.5° |
CA | C | O | 118.8° | 120.0° |
C | CA | H4 | 109.4° | 109.5° |
CA | C | OXT | 117.3° | 120.0° |
O | C | OXT | 123.9° | 120.0° |
H | N | H2 | 109.5° | 111.0° |
H6 | CB | H7 | 109.4° | 109.6° |
H12 | C2 | H13 | 109.5° | 109.5° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O2 | C1 | O3 | C2 | 174.6° | 180.0° |
O2 | C1 | C2 | N1 | 49.6° | 0.0° |
O2 | C1 | C2 | H12 | 171.6° | 120.0° |
O2 | C1 | C2 | H13 | 72.4° | 120.0° |
O2 | C1 | O3 | H15 | 0.0° | 0.1° |
O3 | C1 | C2 | N1 | 135.4° | 180.0° |
O3 | C1 | C2 | H12 | 13.4° | 60.0° |
O3 | C1 | C2 | H13 | 102.6° | 60.0° |
C1 | C2 | N1 | H12 | 122.0° | 120.1° |
C1 | C2 | N1 | H13 | 122.0° | 120.0° |
C1 | C2 | N1 | CH2 | 174.9° | 180.0° |
C1 | C2 | H12 | H13 | 113.3° | 120.0° |
C1 | C2 | N1 | H14 | 54.7° | 0.0° |
C2 | C1 | O3 | H15 | 174.6° | 180.0° |
C2 | N1 | CH2 | H14 | 120.2° | 180.0° |
C2 | N1 | CH2 | CZ2 | 126.6° | 180.0° |
C2 | N1 | CH2 | CZ3 | 48.1° | 0.3° |
N1 | C2 | H12 | H13 | 113.3° | 119.9° |
N1 | CH2 | CZ2 | O7 | 4.1° | 0.0° |
N1 | CH2 | CZ2 | CZ3 | 174.8° | 179.7° |
N1 | CH2 | CZ2 | CE2 | 175.6° | 180.0° |
N1 | CH2 | CZ3 | CE3 | 176.6° | 179.9° |
N1 | CH2 | CZ3 | H11 | 3.5° | 0.2° |
CH2 | N1 | C2 | H12 | 63.0° | 59.9° |
CH2 | N1 | C2 | H13 | 52.9° | 60.0° |
O7 | CZ2 | CH2 | CE2 | 179.7° | 180.0° |
O7 | CZ2 | CH2 | CZ3 | 178.9° | 179.7° |
O7 | CZ2 | CE2 | NE1 | 0.8° | 0.1° |
O7 | CZ2 | CE2 | CD2 | 179.3° | 180.0° |
CZ2 | CH2 | CZ3 | CE3 | 1.9° | 0.4° |
CH2 | CZ2 | CE2 | NE1 | 179.6° | 180.0° |
CH2 | CZ2 | CE2 | CD2 | 1.0° | 0.0° |
CZ2 | CH2 | CZ3 | H11 | 178.1° | 179.9° |
CZ2 | CH2 | N1 | H14 | 6.4° | 0.0° |
CH2 | CZ2 | O7 | H16 | 180.0° | 90.0° |
CZ3 | CH2 | CZ2 | CE2 | 0.8° | 0.2° |
CH2 | CZ3 | CE3 | H11 | 180.0° | 179.8° |
CH2 | CZ3 | CE3 | CD2 | 1.2° | 0.2° |
CH2 | CZ3 | CE3 | H10 | 178.7° | 179.7° |
CZ3 | CH2 | N1 | H14 | 168.3° | 179.7° |
CZ2 | CE2 | NE1 | CD2 | 178.7° | 180.0° |
CZ2 | CE2 | CD2 | CE3 | 1.7° | 0.2° |
CZ2 | CE2 | NE1 | CD1 | 178.5° | 180.0° |
CZ2 | CE2 | CD2 | CG | 179.5° | 179.8° |
CZ2 | CE2 | NE1 | H9 | 1.5° | 0.2° |
CE2 | CZ2 | O7 | H16 | 0.3° | 89.9° |
CZ3 | CE3 | CD2 | CE2 | 0.7° | 0.1° |
CZ3 | CE3 | CD2 | H10 | 180.0° | 179.9° |
CZ3 | CE3 | CD2 | CG | 179.0° | 180.0° |
NE1 | CE2 | CD2 | CE3 | 179.3° | 179.9° |
CE2 | NE1 | CD1 | H9 | 180.0° | 179.8° |
NE1 | CE2 | CD2 | CG | 0.6° | 0.1° |
CE2 | NE1 | CD1 | CG | 1.0° | 0.2° |
CE2 | NE1 | CD1 | H8 | 179.0° | 179.9° |
CE2 | CD2 | CE3 | CG | 178.3° | 180.0° |
CD2 | CE2 | NE1 | CD1 | 0.2° | 0.0° |
CE2 | CD2 | CG | CD1 | 1.1° | 0.2° |
CE2 | CD2 | CG | CB | 179.9° | 180.0° |
CD2 | CE2 | NE1 | H9 | 179.8° | 179.8° |
CE2 | CD2 | CE3 | H10 | 179.3° | 180.0° |
CE3 | CD2 | CG | CD1 | 179.6° | 179.7° |
CE3 | CD2 | CG | CB | 1.6° | 0.0° |
CD2 | CE3 | CZ3 | H11 | 178.8° | 180.0° |
NE1 | CD1 | CG | CD2 | 1.3° | 0.3° |
NE1 | CD1 | CG | H8 | 180.0° | 179.9° |
NE1 | CD1 | CG | CB | 179.9° | 180.0° |
CD2 | CG | CD1 | CB | 178.8° | 179.8° |
CD2 | CG | CB | CA | 109.5° | 84.7° |
CD2 | CG | CB | H6 | 130.2° | 35.2° |
CD2 | CG | CB | H7 | 10.9° | 155.3° |
CD2 | CG | CD1 | H8 | 178.7° | 179.8° |
CG | CD2 | CE3 | H10 | 1.0° | 0.0° |
CD1 | CG | CB | CA | 72.0° | 95.0° |
CD1 | CG | CB | H6 | 48.4° | 145.1° |
CD1 | CG | CB | H7 | 167.6° | 25.0° |
CG | CD1 | NE1 | H9 | 179.0° | 180.0° |
CG | CB | CA | H6 | 120.4° | 119.9° |
CG | CB | CA | H7 | 120.4° | 120.0° |
CG | CB | CA | N | 55.3° | 65.0° |
CG | CB | CA | C | 175.1° | 175.0° |
CG | CB | CA | H4 | 64.6° | 55.0° |
CG | CB | H6 | H7 | 118.9° | 120.1° |
CB | CG | CD1 | H8 | 0.1° | 0.1° |
CB | CA | N | C | 121.1° | 120.0° |
CB | CA | N | H4 | 119.5° | 120.0° |
CB | CA | C | H4 | 120.1° | 120.0° |
CB | CA | C | O | 8.4° | 100.0° |
CB | CA | N | H | 180.0° | 176.0° |
CB | CA | N | H2 | 60.0° | 60.0° |
CA | CB | H6 | H7 | 118.9° | 120.0° |
CB | CA | C | OXT | 170.5° | 80.0° |
N | CA | C | H4 | 119.5° | 120.0° |
N | CA | C | O | 128.8° | 20.0° |
CA | N | H | H2 | 120.0° | 123.9° |
N | CA | CB | H6 | 175.6° | 54.9° |
N | CA | CB | H7 | 65.1° | 175.0° |
N | CA | C | OXT | 50.1° | 160.0° |
CA | C | O | OXT | 178.8° | 180.0° |
C | CA | N | H | 58.9° | 64.0° |
C | CA | N | H2 | 61.1° | 60.0° |
C | CA | CB | H6 | 64.6° | 65.1° |
C | CA | CB | H7 | 54.7° | 55.0° |
CA | C | OXT | HXT | 178.9° | 180.0° |
O | C | CA | H4 | 111.7° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
H | N | CA | H4 | 60.5° | 56.0° |
H2 | N | CA | H4 | 179.5° | 180.0° |
H4 | CA | CB | H6 | 55.8° | 174.9° |
H4 | CA | CB | H7 | 175.0° | 65.0° |
H4 | CA | C | OXT | 69.4° | 40.0° |
H8 | CD1 | NE1 | H9 | 1.0° | 0.1° |
H10 | CE3 | CZ3 | H11 | 1.2° | 0.0° |
H12 | C2 | N1 | H14 | 176.7° | 120.0° |
H13 | C2 | N1 | H14 | 67.3° | 120.0° |