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Summary Geometry Related PDB entries

Obsolete: TMN

TMN was replaced with TRS on

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C	C1	sing	1.53Å	1.55Å
C	C2	sing	1.53Å	1.41Å
C	C3	sing	1.53Å	1.53Å
C	N	sing	1.47Å	1.49Å
C1	O1	sing	1.43Å	1.34Å
C1	H11	sing	1.09Å	1.12Å
C1	H12	sing	1.09Å	1.11Å
C2	O2	sing	1.43Å	1.42Å
C2	H21	sing	1.09Å	1.12Å
C2	H22	sing	1.09Å	1.12Å
C3	O3	sing	1.43Å	1.41Å
C3	H31	sing	1.09Å	1.11Å
C3	H32	sing	1.09Å	1.11Å
N	HN1	sing	1.01Å	1.02Å
N	HN2	sing	1.01Å	1.02Å
O1	HO1	sing	0.97Å	0.95Å
O2	HO2	sing	0.97Å	0.95Å
O3	HO3	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C1	C	C2	104.8°	109.4°
C1	C	C3	106.5°	109.5°
C1	C	N	108.6°	109.5°
C	C1	O1	116.0°	109.5°
C	C1	H11	109.9°	109.5°
C	C1	H12	109.9°	109.5°
C2	C	C3	114.6°	109.4°
C2	C	N	111.2°	109.5°
C	C2	O2	118.6°	109.5°
C	C2	H21	108.9°	109.5°
C	C2	H22	108.9°	109.5°
C3	C	N	110.8°	109.5°
C	C3	O3	123.8°	109.4°
C	C3	H31	107.1°	109.5°
C	C3	H32	107.1°	109.5°
C	N	HN1	108.6°	109.5°
C	N	HN2	112.6°	109.5°
O1	C1	H11	109.8°	109.5°
O1	C1	H12	109.8°	109.5°
C1	O1	HO1	116.0°	106.8°
H11	C1	H12	100.3°	109.4°
O2	C2	H21	108.9°	109.5°
O2	C2	H22	108.9°	109.5°
C2	O2	HO2	118.6°	106.8°
H21	C2	H22	101.1°	109.4°
O3	C3	H31	107.2°	109.5°
O3	C3	H32	107.2°	109.4°
C3	O3	HO3	123.8°	106.8°
H31	C3	H32	102.6°	109.5°
HN1	N	HN2	112.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C1	C	C2	C3	116.3°	120.0°
C1	C	C2	N	117.1°	120.0°
C1	C	C3	N	117.8°	120.0°
C	C1	O1	H11	125.3°	120.0°
C	C1	O1	H12	125.3°	120.0°
C	C1	H11	H12	115.7°	120.0°
C1	C	C2	O2	179.7°	65.0°
C1	C	C2	H21	55.0°	175.0°
C1	C	C2	H22	54.4°	55.0°
C1	C	C3	O3	61.9°	60.1°
C1	C	C3	H31	172.8°	59.9°
C1	C	C3	H32	63.4°	180.0°
C1	C	N	HN1	180.0°	60.0°
C1	C	N	HN2	54.7°	180.0°
C	C1	O1	HO1	179.9°	180.0°
C2	C	C3	N	126.8°	120.0°
C2	C	C1	O1	179.7°	60.0°
C2	C	C1	H11	54.5°	180.0°
C2	C	C1	H12	55.0°	60.0°
C	C2	O2	H21	125.3°	120.0°
C	C2	O2	H22	125.2°	120.0°
C	C2	H21	H22	114.6°	120.0°
C2	C	C3	O3	53.5°	180.0°
C2	C	C3	H31	71.8°	60.0°
C2	C	C3	H32	178.7°	60.0°
C2	C	N	HN1	65.2°	60.0°
C2	C	N	HN2	60.1°	60.1°
C	C2	O2	HO2	180.0°	180.0°
C3	C	C1	O1	58.4°	60.0°
C3	C	C1	H11	176.3°	60.0°
C3	C	C1	H12	66.8°	180.0°
C3	C	C2	O2	64.0°	175.0°
C3	C	C2	H21	61.3°	55.0°
C3	C	C2	H22	170.7°	64.9°
C	C3	O3	H31	125.2°	120.0°
C	C3	O3	H32	125.2°	120.0°
C	C3	H31	H32	112.6°	120.1°
C3	C	N	HN1	63.5°	180.0°
C3	C	N	HN2	171.3°	59.9°
C	C3	O3	HO3	180.0°	180.0°
N	C	C1	O1	60.8°	180.0°
N	C	C1	H11	64.4°	60.0°
N	C	C1	H12	173.9°	60.0°
N	C	C2	O2	62.6°	55.0°
N	C	C2	H21	172.1°	65.0°
N	C	C2	H22	62.7°	175.0°
N	C	C3	O3	179.7°	60.0°
N	C	C3	H31	55.0°	180.0°
N	C	C3	H32	54.5°	60.0°
C	N	HN1	HN2	125.3°	120.0°
O1	C1	H11	H12	115.6°	120.0°
H11	C1	O1	HO1	54.7°	60.0°
H12	C1	O1	HO1	54.8°	60.0°
O2	C2	H21	H22	114.6°	120.0°
H21	C2	O2	HO2	54.7°	60.0°
H22	C2	O2	HO2	54.7°	60.0°
O3	C3	H31	H32	112.7°	120.0°
H31	C3	O3	HO3	54.8°	60.0°
H32	C3	O3	HO3	54.7°	60.0°

246704

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