TIZ
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O2' | C2' | sing | 1.41Å | 1.46Å | |
O2' | HO2' | sing | 0.97Å | 0.95Å | |
C2' | C1' | sing | 1.53Å | 1.52Å | |
C2' | C3' | sing | 1.52Å | 1.58Å | |
C2' | H2' | sing | 1.10Å | 1.10Å | |
C3' | C4' | sing | 1.52Å | 1.54Å | |
C3' | O3' | sing | 1.43Å | 1.45Å | |
C3' | H3' | sing | 1.09Å | 1.10Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å | |
C4' | C5' | sing | 1.52Å | 1.52Å | |
C4' | O4' | sing | 1.45Å | 1.43Å | |
C4' | H4' | sing | 1.09Å | 1.10Å | |
C5' | O5' | sing | 1.42Å | 1.44Å | |
C5' | H5'1 | sing | 1.09Å | 1.10Å | |
C5' | H5'2 | sing | 1.09Å | 1.10Å | |
O5' | HO5' | sing | 0.97Å | 0.95Å | |
O4' | C1' | sing | 1.45Å | 1.41Å | |
C1' | C1M | sing | 1.50Å | 1.52Å | |
C1' | H1' | sing | 1.10Å | 1.10Å | |
C1M | S1J | sing | 1.72Å | 1.69Å | |
C1M | N1H | doub | 1.32Å | 1.34Å | |
N1H | C1L | sing | 1.38Å | 1.36Å | |
S1J | C1F | sing | 1.72Å | 1.69Å | |
C1F | C1L | doub | 1.38Å | 1.34Å | |
C1F | H1F | sing | 1.08Å | 1.08Å | |
C1L | C1K | sing | 1.44Å | 1.53Å | |
C1K | O1B | doub | 1.25Å | 1.23Å | |
C1K | N1A | sing | 1.40Å | 1.34Å | |
N1A | H1A1 | sing | 1.01Å | 1.00Å | |
N1A | H1A2 | sing | 1.02Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2' | O2' | HO2' | 109.5° | 107.2° |
O2' | C2' | C1' | 109.0° | 112.0° |
O2' | C2' | C3' | 114.7° | 112.8° |
O2' | C2' | H2' | 104.2° | 108.7° |
C1' | C2' | C3' | 102.1° | 102.5° |
C1' | C2' | H2' | 116.4° | 110.9° |
C2' | C1' | O4' | 103.5° | 105.7° |
C2' | C1' | C1M | 108.0° | 113.3° |
C2' | C1' | H1' | 115.3° | 110.6° |
C3' | C2' | H2' | 110.9° | 109.9° |
C2' | C3' | C4' | 102.3° | 102.4° |
C2' | C3' | O3' | 114.0° | 110.8° |
C2' | C3' | H3' | 110.7° | 113.2° |
C4' | C3' | O3' | 107.6° | 109.4° |
C4' | C3' | H3' | 116.8° | 113.9° |
C3' | C4' | C5' | 110.7° | 113.0° |
C3' | C4' | O4' | 105.4° | 106.3° |
C3' | C4' | H4' | 111.4° | 112.1° |
O3' | C3' | H3' | 105.7° | 107.1° |
C3' | O3' | HO3' | 109.5° | 106.4° |
C5' | C4' | O4' | 109.6° | 108.3° |
C5' | C4' | H4' | 107.3° | 109.2° |
C4' | C5' | O5' | 108.5° | 108.7° |
C4' | C5' | H5'1 | 109.8° | 110.1° |
C4' | C5' | H5'2 | 110.1° | 110.1° |
O4' | C4' | H4' | 112.5° | 107.6° |
C4' | O4' | C1' | 104.0° | 109.5° |
O5' | C5' | H5'1 | 109.8° | 109.1° |
O5' | C5' | H5'2 | 110.0° | 109.1° |
C5' | O5' | HO5' | 109.5° | 107.0° |
H5'1 | C5' | H5'2 | 108.7° | 109.6° |
O4' | C1' | C1M | 112.8° | 112.7° |
O4' | C1' | H1' | 110.8° | 107.2° |
C1M | C1' | H1' | 106.6° | 107.2° |
C1' | C1M | S1J | 124.2° | 119.2° |
C1' | C1M | N1H | 126.3° | 124.6° |
S1J | C1M | N1H | 109.5° | 116.2° |
C1M | S1J | C1F | 94.2° | 89.3° |
C1M | N1H | C1L | 112.4° | 109.0° |
N1H | C1L | C1F | 117.0° | 115.9° |
N1H | C1L | C1K | 120.2° | 120.3° |
S1J | C1F | C1L | 106.9° | 109.6° |
S1J | C1F | H1F | 126.6° | 121.5° |
C1L | C1F | H1F | 126.6° | 128.9° |
C1F | C1L | C1K | 122.8° | 123.8° |
C1L | C1K | O1B | 120.0° | 122.1° |
C1L | C1K | N1A | 116.4° | 118.4° |
O1B | C1K | N1A | 123.6° | 119.5° |
C1K | N1A | H1A1 | 109.5° | 119.0° |
C1K | N1A | H1A2 | 125.3° | 122.1° |
H1A1 | N1A | H1A2 | 125.3° | 118.9° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O2' | C2' | C1' | C3' | 121.8° | 121.2° |
O2' | C2' | C1' | H2' | 117.4° | 121.6° |
O2' | C2' | C3' | H2' | 117.7° | 121.4° |
O2' | C2' | C3' | C4' | 127.7° | 156.9° |
O2' | C2' | C3' | O3' | 11.9° | 40.4° |
O2' | C2' | C3' | H3' | 107.1° | 80.0° |
O2' | C2' | C1' | O4' | 157.2° | 152.3° |
O2' | C2' | C1' | C1M | 83.0° | 83.8° |
O2' | C2' | C1' | H1' | 36.1° | 36.6° |
HO2' | O2' | C2' | C1' | 130.5° | 113.5° |
HO2' | O2' | C2' | C3' | 115.7° | 131.5° |
HO2' | O2' | C2' | H2' | 5.7° | 9.3° |
C1' | C2' | C3' | H2' | 124.6° | 117.9° |
C1' | C2' | C3' | C4' | 10.0° | 36.3° |
C1' | C2' | C3' | O3' | 105.9° | 80.2° |
C1' | C2' | C3' | H3' | 135.1° | 159.4° |
C2' | C1' | O4' | C4' | 49.1° | 13.2° |
C2' | C1' | O4' | C1M | 116.5° | 124.2° |
C2' | C1' | O4' | H1' | 124.2° | 118.0° |
C2' | C1' | C1M | H1' | 124.5° | 122.3° |
C2' | C1' | C1M | S1J | 71.9° | 92.2° |
C2' | C1' | C1M | N1H | 108.9° | 87.7° |
C2' | C3' | C4' | O3' | 120.4° | 117.5° |
C2' | C3' | C4' | H3' | 121.1° | 122.6° |
C2' | C3' | O3' | H3' | 121.8° | 124.0° |
C2' | C3' | O3' | HO3' | 82.0° | 32.3° |
C2' | C3' | C4' | C5' | 136.6° | 89.3° |
C2' | C3' | C4' | O4' | 18.2° | 29.4° |
C2' | C3' | C4' | H4' | 104.1° | 146.7° |
C3' | C2' | C1' | O4' | 35.5° | 31.1° |
C3' | C2' | C1' | C1M | 155.3° | 155.0° |
C3' | C2' | C1' | H1' | 85.7° | 84.6° |
H2' | C2' | C3' | C4' | 114.6° | 81.7° |
H2' | C2' | C3' | O3' | 129.6° | 161.8° |
H2' | C2' | C3' | H3' | 10.5° | 41.4° |
H2' | C2' | C1' | O4' | 85.4° | 86.1° |
H2' | C2' | C1' | C1M | 34.4° | 37.7° |
H2' | C2' | C1' | H1' | 153.5° | 158.2° |
C4' | C3' | O3' | H3' | 125.5° | 124.0° |
C4' | C3' | O3' | HO3' | 30.6° | 144.4° |
C3' | C4' | C5' | O4' | 115.8° | 117.5° |
C3' | C4' | C5' | H4' | 121.8° | 125.6° |
C3' | C4' | O4' | H4' | 121.6° | 120.3° |
C3' | C4' | C5' | O5' | 179.4° | 179.5° |
C3' | C4' | C5' | H5'1 | 59.5° | 60.0° |
C3' | C4' | C5' | H5'2 | 60.1° | 61.0° |
C3' | C4' | O4' | C1' | 42.2° | 10.2° |
O3' | C3' | C4' | C5' | 103.0° | 153.2° |
O3' | C3' | C4' | O4' | 138.5° | 88.2° |
O3' | C3' | C4' | H4' | 16.3° | 29.2° |
H3' | C3' | O3' | HO3' | 156.1° | 91.6° |
H3' | C3' | C4' | C5' | 15.6° | 33.3° |
H3' | C3' | C4' | O4' | 102.9° | 152.0° |
H3' | C3' | C4' | H4' | 134.9° | 90.7° |
C5' | C4' | O4' | H4' | 119.3° | 117.9° |
C4' | C5' | O5' | H5'1 | 120.0° | 120.1° |
C4' | C5' | O5' | H5'2 | 120.4° | 120.1° |
C4' | C5' | H5'1 | H5'2 | 120.4° | 121.3° |
C4' | C5' | O5' | HO5' | 90.6° | 171.2° |
C5' | C4' | O4' | C1' | 161.4° | 111.5° |
O4' | C4' | C5' | O5' | 64.7° | 62.0° |
O4' | C4' | C5' | H5'1 | 175.3° | 57.5° |
O4' | C4' | C5' | H5'2 | 55.7° | 178.5° |
C4' | O4' | C1' | C1M | 165.5° | 137.4° |
C4' | O4' | C1' | H1' | 75.1° | 104.8° |
H4' | C4' | C5' | O5' | 57.7° | 54.9° |
H4' | C4' | C5' | H5'1 | 62.3° | 174.4° |
H4' | C4' | C5' | H5'2 | 178.1° | 64.6° |
H4' | C4' | O4' | C1' | 79.4° | 130.6° |
O5' | C5' | H5'1 | H5'2 | 120.4° | 119.5° |
H5'1 | C5' | O5' | HO5' | 149.3° | 68.7° |
H5'2 | C5' | O5' | HO5' | 29.8° | 51.1° |
O4' | C1' | C1M | H1' | 121.7° | 117.7° |
O4' | C1' | C1M | S1J | 174.3° | 147.8° |
O4' | C1' | C1M | N1H | 4.9° | 32.3° |
C1' | C1M | S1J | N1H | 179.3° | 179.9° |
C1' | C1M | N1H | C1L | 180.0° | 179.9° |
C1' | C1M | S1J | C1F | 179.7° | 180.0° |
H1' | C1' | C1M | S1J | 52.5° | 30.1° |
H1' | C1' | C1M | N1H | 126.6° | 150.0° |
S1J | C1M | N1H | C1L | 0.7° | 0.0° |
C1M | S1J | C1F | C1L | 0.1° | 0.1° |
C1M | S1J | C1F | H1F | 179.9° | 180.0° |
N1H | C1M | S1J | C1F | 0.5° | 0.1° |
C1M | N1H | C1L | C1F | 0.7° | 0.1° |
C1M | N1H | C1L | C1K | 179.8° | 180.0° |
N1H | C1L | C1F | S1J | 0.3° | 0.1° |
N1H | C1L | C1F | C1K | 179.5° | 179.9° |
N1H | C1L | C1F | H1F | 179.7° | 180.0° |
N1H | C1L | C1K | O1B | 10.0° | 179.1° |
N1H | C1L | C1K | N1A | 170.2° | 0.1° |
S1J | C1F | C1L | H1F | 180.0° | 179.9° |
S1J | C1F | C1L | C1K | 179.8° | 180.0° |
C1F | C1L | C1K | O1B | 169.5° | 0.8° |
C1F | C1L | C1K | N1A | 10.3° | 180.0° |
H1F | C1F | C1L | C1K | 0.2° | 0.1° |
C1L | C1K | O1B | N1A | 179.8° | 179.2° |
C1L | C1K | N1A | H1A1 | 0.1° | 0.1° |
C1L | C1K | N1A | H1A2 | 179.9° | 180.0° |
O1B | C1K | N1A | H1A1 | 179.9° | 179.1° |
O1B | C1K | N1A | H1A2 | 0.1° | 0.8° |
C1K | N1A | H1A1 | H1A2 | 180.0° | 179.9° |