Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

TIY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C13O14sing1.36Å1.35Å
C13C12sing1.38Å1.40ÅAromatic
C15C13doub1.40Å1.40ÅAromatic
O01C02sing1.36Å1.35Å
C02C15sing1.38Å1.39ÅAromatic
C02C03doub1.40Å1.44ÅAromatic
C03C04sing1.42Å1.44ÅAromatic
C04C12doub1.40Å1.43ÅAromatic
C04C05sing1.41Å1.42Å
C05C06doub1.36Å1.40Å
C07C06sing1.40Å1.39Å
C08C07doub1.37Å1.40Å
C09C03sing1.46Å1.43Å
C09C08sing1.42Å1.42Å
O10C09doub1.22Å1.27Å
O11C08sing1.36Å1.37Å
O16C15sing1.36Å1.36Å
O01HO01sing0.97Å0.95Å
C06H06sing1.08Å1.08Å
C07H07sing1.08Å1.08Å
O11H4sing0.97Å0.95Å
C12H12sing1.08Å1.08Å
O14HO14sing0.97Å0.95Å
O16HO16sing0.97Å0.95Å
C05H05sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O14C13C12119.3°119.6°
O14C13C15121.5°119.6°
C13O14HO14109.5°114.0°
C12C13C15119.2°120.7°
C13C12C04122.6°119.8°
C13C12H12118.7°120.1°
C13C15C02119.4°120.5°
C13C15O16122.3°119.8°
O01C02C15111.5°120.2°
O01C02C03125.0°120.1°
C02O01HO01109.5°114.0°
C15C02C03123.5°119.6°
C02C15O16118.3°119.7°
C02C03C04116.4°119.7°
C02C03C09118.1°112.4°
C03C04C12118.9°119.6°
C03C04C05127.8°128.2°
C04C03C09125.4°127.9°
C12C04C05113.4°112.2°
C04C12H12118.7°120.1°
C04C05C06131.0°128.7°
C04C05H05114.5°115.6°
C05C06C07128.0°130.0°
C05C06H06116.0°115.0°
C06C05H05114.5°115.7°
C06C07C08128.7°130.0°
C07C06H06116.0°115.0°
C06C07H07115.6°115.0°
C07C08C09129.1°128.2°
C07C08O11111.5°115.9°
C08C07H07115.7°115.0°
C03C09C08129.9°127.0°
C03C09O10118.0°116.5°
C08C09O10112.0°116.5°
C09C08O11119.4°115.9°
C08O11H4109.5°114.0°
C15O16HO16109.5°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O14C13C12C15179.4°179.8°
O14C13C15C02179.8°180.0°
O14C13C12C04179.5°179.7°
O14C13C15O160.5°0.0°
O14C13C12H120.5°0.0°
C12C13C15C020.5°0.3°
C13C12C04C030.3°0.6°
C13C12C04H12180.0°179.7°
C13C12C04C05179.6°179.7°
C12C13C15O16179.9°179.8°
C12C13O14HO14180.0°90.0°
C13C15C02O01179.8°180.0°
C13C15C02O16179.7°179.9°
C13C15C02C030.4°0.0°
C15C13C12C040.1°0.6°
C15C13C12H12179.8°179.7°
C15C13O14HO140.6°89.8°
C13C15O16HO16180.0°90.0°
O01C02C15C03179.8°179.9°
O01C02C03C04179.8°180.0°
O01C02C03C090.3°0.1°
O01C02C15O160.1°0.1°
C15C02C03C040.0°0.1°
C15C02C03C09180.0°180.0°
C15C02O01HO01179.8°89.9°
C02C15O16HO160.3°90.1°
C02C03C04C09179.9°179.9°
C02C03C04C120.3°0.4°
C02C03C04C05179.5°180.0°
C02C03C09C08179.8°180.0°
C02C03C09O100.4°0.0°
C03C02C15O16179.9°180.0°
C03C02O01HO010.1°90.0°
C03C04C12C05179.3°179.7°
C03C04C05C060.8°0.0°
C04C03C09C080.1°0.1°
C04C03C09O10179.6°179.9°
C03C04C12H12179.8°179.7°
C03C04C05H05179.2°180.0°
C12C04C05C06180.0°179.7°
C12C04C03C09179.6°179.7°
C12C04C05H050.1°0.3°
C04C05C06H05180.0°180.0°
C04C05C06C071.0°0.0°
C05C04C03C090.4°0.1°
C04C05C06H06179.0°180.0°
C05C04C12H120.4°0.0°
C05C06C07H06180.0°180.0°
C05C06C07C080.8°0.0°
C05C06C07H07179.3°180.0°
C06C07C08H07180.0°180.0°
C06C07C08C090.4°0.1°
C06C07C08O11179.5°179.9°
C07C06C05H05179.0°180.0°
C07C08C09C030.0°0.1°
C07C08C09O11179.9°180.0°
C07C08C09O10179.8°179.9°
C08C07C06H06179.2°180.0°
C07C08O11H4179.9°0.1°
C03C09C08O10179.8°180.0°
C03C09C08O11179.8°179.9°
C09C08C07H07179.7°180.0°
C09C08O11H40.0°179.9°
O10C09C08O110.0°0.1°
O11C08C07H070.5°0.0°
H06C06C07H070.7°0.0°
H06C06C05H051.0°0.0°

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon