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TIA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
S1C2sing1.71Å1.76ÅAromatic
S1C5sing1.71Å1.77ÅAromatic
C2N3doub1.29Å1.34ÅAromatic
C2C1'sing1.51Å1.49Å
N3C4sing1.33Å1.35ÅAromatic
C4C5doub1.35Å1.37ÅAromatic
C4C6sing1.47Å1.44Å
C5H5sing1.08Å1.08Å
C6O6doub1.22Å1.23Å
C6N6sing1.35Å1.36Å
N6HN61sing0.97Å1.00Å
N6HN62sing0.97Å1.00Å
C1'C2'sing1.54Å1.49Å
C1'O4'sing1.44Å1.49Å
C1'H1'sing1.09Å1.10Å
C2'O2'sing1.43Å1.47Å
C2'C3'sing1.55Å1.55Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
C3'O3'sing1.43Å1.46Å
C3'C4'sing1.55Å1.53Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C4'O4'sing1.44Å1.44Å
C4'C5'sing1.53Å1.55Å
C4'H4'sing1.09Å1.10Å
C5'H5'1sing1.09Å1.10Å
C5'H5'2sing1.09Å1.10Å
C5'H5'3sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2S1C592.5°91.1°
S1C2N3112.5°110.5°
S1C2C1'131.8°124.7°
S1C5C4102.2°108.8°
S1C5H5128.9°125.6°
N3C2C1'115.6°124.7°
C2N3C4107.9°115.8°
C2C1'C2'128.4°109.9°
C2C1'O4'106.2°109.8°
C2C1'H1'105.5°109.9°
N3C4C5124.9°113.7°
N3C4C6109.3°123.2°
C5C4C6125.8°123.2°
C4C5H5128.9°125.5°
C4C6O6117.1°120.0°
C4C6N6111.7°120.0°
O6C6N6131.3°120.0°
C6N6HN61120.0°120.0°
C6N6HN62120.0°120.0°
HN61N6HN62120.0°120.0°
C2'C1'O4'104.0°107.3°
C2'C1'H1'105.4°109.9°
C1'C2'O2'109.2°110.5°
C1'C2'C3'100.7°104.2°
C1'C2'H2'111.5°110.5°
O4'C1'H1'105.5°110.0°
C1'O4'C4'113.2°107.0°
O2'C2'C3'112.5°110.5°
O2'C2'H2'111.9°110.5°
C2'O2'HO2'109.5°114.0°
C3'C2'H2'110.6°110.5°
C2'C3'O3'106.3°110.9°
C2'C3'C4'110.2°102.1°
C2'C3'H3'111.6°110.9°
O3'C3'C4'103.3°110.9°
O3'C3'H3'113.1°110.8°
C3'O3'HO3'109.5°114.0°
C4'C3'H3'111.9°110.9°
C3'C4'O4'100.8°103.5°
C3'C4'C5'119.2°110.6°
C3'C4'H4'107.0°110.6°
O4'C4'C5'114.3°110.6°
O4'C4'H4'108.1°110.7°
C5'C4'H4'106.8°110.7°
C4'C5'H5'1109.5°109.5°
C4'C5'H5'2109.5°109.4°
C4'C5'H5'3109.5°109.5°
H5'1C5'H5'2109.5°109.5°
H5'1C5'H5'3109.4°109.5°
H5'2C5'H5'3109.4°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
S1C2N3C1'177.2°179.9°
S1C2N3C40.9°0.0°
C2S1C5C40.2°0.0°
C2S1C5H5179.8°179.9°
S1C2C1'C2'36.0°75.0°
S1C2C1'O4'159.5°42.8°
S1C2C1'H1'88.8°164.0°
C5S1C2N30.5°0.0°
C5S1C2C1'176.2°179.9°
S1C5C4N30.9°0.0°
S1C5C4H5180.0°179.9°
S1C5C4C6177.0°180.0°
C2N3C4C51.3°0.0°
C2N3C4C6176.9°180.0°
N3C2C1'C2'147.4°105.0°
N3C2C1'O4'23.9°137.2°
N3C2C1'H1'87.8°16.1°
C1'C2N3C4176.3°180.0°
C2C1'C2'O4'124.4°119.4°
C2C1'C2'H1'124.9°121.0°
C2C1'O4'H1'111.7°121.1°
C2C1'C2'O2'85.1°119.9°
C2C1'C2'C3'156.4°121.4°
C2C1'C2'H2'39.1°2.7°
C2C1'O4'C4'168.2°146.0°
N3C4C5C6177.9°180.0°
N3C4C5H5179.1°180.0°
N3C4C6O6177.1°180.0°
N3C4C6N62.9°0.0°
C5C4C6O61.0°0.0°
C5C4C6N6178.9°180.0°
C6C4C5H53.0°0.1°
C4C6O6N6180.0°180.0°
C4C6N6HN61180.0°0.0°
C4C6N6HN620.0°180.0°
O6C6N6HN610.0°180.0°
O6C6N6HN62180.0°0.0°
C6N6HN61HN62180.0°180.0°
C2'C1'O4'H1'110.7°119.5°
C1'C2'O2'C3'110.8°114.8°
C1'C2'O2'H2'123.9°122.6°
C1'C2'C3'H2'118.0°118.7°
C1'C2'O2'HO2'180.0°61.5°
C1'C2'C3'O3'85.2°139.1°
C1'C2'C3'C4'26.1°20.9°
C1'C2'C3'H3'151.2°97.3°
C2'C1'O4'C4'30.6°26.6°
O4'C1'C2'O2'150.5°120.7°
O4'C1'C2'C3'32.0°2.0°
O4'C1'C2'H2'85.3°116.7°
C1'O4'C4'C3'13.1°40.1°
C1'O4'C4'C5'142.3°158.5°
C1'O4'C4'H4'98.9°78.4°
H1'C1'C2'O2'39.8°1.1°
H1'C1'C2'C3'78.7°117.6°
H1'C1'C2'H2'163.9°123.7°
H1'C1'O4'C4'80.1°93.0°
O2'C2'C3'H2'125.9°122.6°
O2'C2'C3'O3'30.9°20.4°
O2'C2'C3'C4'142.2°97.8°
O2'C2'C3'H3'92.8°144.0°
C3'C2'O2'HO2'69.1°176.3°
C2'C3'O3'C4'116.0°112.7°
C2'C3'O3'H3'122.8°123.7°
C2'C3'C4'H3'124.9°118.2°
C2'C3'O3'HO3'180.0°180.0°
C2'C3'C4'O4'8.7°37.1°
C2'C3'C4'C5'117.2°155.5°
C2'C3'C4'H4'121.6°81.5°
H2'C2'O2'HO2'56.1°61.1°
H2'C2'C3'O3'156.9°102.2°
H2'C2'C3'C4'91.8°139.6°
H2'C2'C3'H3'33.2°21.4°
O3'C3'C4'H3'121.9°123.6°
O3'C3'C4'O4'104.5°155.3°
O3'C3'C4'C5'129.6°86.3°
O3'C3'C4'H4'8.4°36.7°
C4'C3'O3'HO3'64.0°67.3°
C3'C4'O4'C5'129.2°118.4°
C3'C4'O4'H4'112.1°118.5°
C3'C4'C5'H4'121.2°123.0°
C3'C4'C5'H5'1180.0°60.0°
C3'C4'C5'H5'260.0°180.0°
C3'C4'C5'H5'360.0°60.1°
H3'C3'O3'HO3'57.2°56.3°
H3'C3'C4'O4'133.6°81.2°
H3'C3'C4'C5'7.6°37.3°
H3'C3'C4'H4'113.5°160.3°
O4'C4'C5'H4'119.5°123.0°
O4'C4'C5'H5'160.7°54.0°
O4'C4'C5'H5'2179.3°66.0°
O4'C4'C5'H5'359.3°174.1°
C4'C5'H5'1H5'2120.0°120.0°
C4'C5'H5'1H5'3120.0°120.0°
C4'C5'H5'2H5'3120.0°119.9°
H4'C4'C5'H5'158.8°177.1°
H4'C4'C5'H5'261.3°57.0°
H4'C4'C5'H5'3178.8°62.9°
H5'1C5'H5'2H5'3120.0°120.0°

221371

PDB entries from 2024-06-19

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