Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.46Å | 1.46Å | |
N | C | sing | 1.35Å | 1.37Å | |
N | HN | sing | 0.97Å | 1.02Å | |
CA | CB | sing | 1.53Å | 1.54Å | |
CA | CT | sing | 1.51Å | 1.52Å | |
CA | HA | sing | 1.09Å | 1.11Å | |
C | O | doub | 1.22Å | 1.24Å | |
C | C11 | sing | 1.48Å | 1.52Å | |
C4 | O4 | doub | 1.22Å | 1.26Å | |
C4 | C4A | sing | 1.41Å | 1.53Å | Aromatic |
C4 | N3 | sing | 1.34Å | 1.39Å | Aromatic |
C4A | N5 | sing | 1.41Å | 1.48Å | |
C4A | C8A | doub | 1.37Å | 1.49Å | Aromatic |
N5 | C6 | sing | 1.47Å | 1.51Å | |
N5 | HN5 | sing | 0.97Å | 1.02Å | |
C6 | C7 | sing | 1.54Å | 1.56Å | |
C6 | C9 | sing | 1.53Å | 1.54Å | |
C6 | H6 | sing | 1.09Å | 1.12Å | |
C7 | N8 | sing | 1.47Å | 1.49Å | |
C7 | H71 | sing | 1.09Å | 1.11Å | |
C7 | H72 | sing | 1.09Å | 1.11Å | |
N8 | C8A | sing | 1.38Å | 1.40Å | |
N8 | HN8 | sing | 0.97Å | 1.02Å | |
C8A | N1 | sing | 1.37Å | 1.38Å | Aromatic |
C9 | N10 | sing | 1.47Å | 1.46Å | |
C9 | H91 | sing | 1.09Å | 1.11Å | |
C9 | H92 | sing | 1.09Å | 1.11Å | |
N10 | C14 | sing | 1.39Å | 1.36Å | |
N10 | H10 | sing | 0.97Å | 1.02Å | |
C11 | C12 | doub | 1.40Å | 1.44Å | Aromatic |
C11 | C16 | sing | 1.40Å | 1.44Å | Aromatic |
C12 | C13 | sing | 1.38Å | 1.46Å | Aromatic |
C12 | H12 | sing | 1.08Å | 1.10Å | |
C13 | C14 | doub | 1.39Å | 1.46Å | Aromatic |
C13 | H13 | sing | 1.08Å | 1.10Å | |
C14 | C15 | sing | 1.39Å | 1.45Å | Aromatic |
C15 | C16 | doub | 1.38Å | 1.41Å | Aromatic |
C15 | H15 | sing | 1.08Å | 1.10Å | |
C16 | H16 | sing | 1.08Å | 1.10Å | |
NA2 | C2 | sing | 1.37Å | 1.38Å | |
NA2 | HA21 | sing | 0.97Å | 1.02Å | |
NA2 | HA22 | sing | 0.97Å | 1.02Å | |
N3 | C2 | doub | 1.32Å | 1.39Å | Aromatic |
N1 | C2 | sing | 1.36Å | 1.36Å | Aromatic |
N1 | HN1 | sing | 0.97Å | 1.02Å | |
CB | CG | sing | 1.53Å | 1.52Å | |
CB | HB1 | sing | 1.09Å | 1.11Å | |
CB | HB2 | sing | 1.09Å | 1.11Å | |
CG | CD | sing | 1.51Å | 1.52Å | |
CG | HG1 | sing | 1.09Å | 1.11Å | |
CG | HG2 | sing | 1.09Å | 1.11Å | |
CD | OE1 | sing | 1.34Å | 1.23Å | |
CD | OE2 | doub | 1.21Å | 1.34Å | |
OE1 | HE1 | sing | 0.97Å | 0.95Å | |
CT | O1 | doub | 1.21Å | 1.23Å | |
CT | O2 | sing | 1.34Å | 1.33Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | C | 124.5° | 120.0° |
CA | N | HN | 121.2° | 120.0° |
N | CA | CB | 102.9° | 109.5° |
N | CA | CT | 107.5° | 109.5° |
N | CA | HA | 116.3° | 109.5° |
C | N | HN | 114.3° | 120.0° |
N | C | O | 120.6° | 120.0° |
N | C | C11 | 117.7° | 120.0° |
CB | CA | CT | 113.7° | 109.5° |
CB | CA | HA | 110.5° | 109.5° |
CA | CB | CG | 114.8° | 109.5° |
CA | CB | HB1 | 110.3° | 109.4° |
CA | CB | HB2 | 110.3° | 109.5° |
CT | CA | HA | 106.1° | 109.5° |
CA | CT | O1 | 122.6° | 120.0° |
CA | CT | O2 | 118.7° | 120.0° |
O | C | C11 | 121.7° | 120.0° |
C | C11 | C12 | 123.9° | 120.1° |
C | C11 | C16 | 116.2° | 120.1° |
O4 | C4 | C4A | 119.3° | 120.4° |
O4 | C4 | N3 | 121.7° | 120.3° |
C4A | C4 | N3 | 118.9° | 119.3° |
C4 | C4A | N5 | 129.5° | 120.6° |
C4 | C4A | C8A | 114.4° | 119.2° |
C4 | N3 | C2 | 122.0° | 121.1° |
N5 | C4A | C8A | 116.1° | 120.2° |
C4A | N5 | C6 | 122.8° | 118.5° |
C4A | N5 | HN5 | 107.4° | 120.7° |
C4A | C8A | N8 | 115.9° | 120.4° |
C4A | C8A | N1 | 121.2° | 119.0° |
C6 | N5 | HN5 | 107.5° | 120.8° |
N5 | C6 | C7 | 108.1° | 107.9° |
N5 | C6 | C9 | 111.9° | 109.8° |
N5 | C6 | H6 | 108.2° | 109.7° |
C7 | C6 | C9 | 107.7° | 109.8° |
C7 | C6 | H6 | 112.3° | 109.7° |
C6 | C7 | N8 | 111.8° | 108.2° |
C6 | C7 | H71 | 111.3° | 109.7° |
C6 | C7 | H72 | 111.4° | 109.7° |
C9 | C6 | H6 | 108.6° | 109.8° |
C6 | C9 | N10 | 114.4° | 109.5° |
C6 | C9 | H91 | 110.4° | 109.5° |
C6 | C9 | H92 | 110.4° | 109.4° |
N8 | C7 | H71 | 111.4° | 109.7° |
N8 | C7 | H72 | 111.3° | 109.8° |
C7 | N8 | C8A | 129.3° | 119.1° |
C7 | N8 | HN8 | 105.3° | 120.4° |
H71 | C7 | H72 | 99.0° | 109.8° |
C8A | N8 | HN8 | 105.3° | 120.4° |
N8 | C8A | N1 | 122.9° | 120.6° |
C8A | N1 | C2 | 122.0° | 120.0° |
C8A | N1 | HN1 | 107.8° | 120.0° |
N10 | C9 | H91 | 110.4° | 109.5° |
N10 | C9 | H92 | 110.4° | 109.5° |
C9 | N10 | C14 | 119.3° | 120.0° |
C9 | N10 | H10 | 108.7° | 120.0° |
H91 | C9 | H92 | 99.9° | 109.5° |
C14 | N10 | H10 | 108.6° | 120.0° |
N10 | C14 | C13 | 120.0° | 119.9° |
N10 | C14 | C15 | 120.8° | 120.0° |
C12 | C11 | C16 | 119.9° | 119.9° |
C11 | C12 | C13 | 119.0° | 119.9° |
C11 | C12 | H12 | 119.9° | 120.0° |
C11 | C16 | C15 | 121.4° | 119.9° |
C11 | C16 | H16 | 120.5° | 120.0° |
C13 | C12 | H12 | 121.1° | 120.1° |
C12 | C13 | C14 | 120.2° | 120.1° |
C12 | C13 | H13 | 120.0° | 119.9° |
C14 | C13 | H13 | 119.8° | 120.0° |
C13 | C14 | C15 | 119.3° | 120.1° |
C14 | C15 | C16 | 120.1° | 120.1° |
C14 | C15 | H15 | 121.2° | 119.9° |
C16 | C15 | H15 | 118.6° | 119.9° |
C15 | C16 | H16 | 118.1° | 120.0° |
C2 | NA2 | HA21 | 107.6° | 120.0° |
C2 | NA2 | HA22 | 122.5° | 120.0° |
NA2 | C2 | N3 | 122.5° | 119.3° |
NA2 | C2 | N1 | 116.0° | 119.3° |
HA21 | NA2 | HA22 | 107.6° | 120.0° |
N3 | C2 | N1 | 121.5° | 121.4° |
C2 | N1 | HN1 | 107.7° | 120.0° |
CG | CB | HB1 | 110.3° | 109.5° |
CG | CB | HB2 | 110.3° | 109.5° |
CB | CG | CD | 114.1° | 109.5° |
CB | CG | HG1 | 110.5° | 109.5° |
CB | CG | HG2 | 110.5° | 109.4° |
HB1 | CB | HB2 | 100.0° | 109.5° |
CD | CG | HG1 | 110.5° | 109.5° |
CD | CG | HG2 | 110.5° | 109.5° |
CG | CD | OE1 | 117.2° | 120.0° |
CG | CD | OE2 | 123.3° | 120.0° |
HG1 | CG | HG2 | 99.8° | 109.5° |
OE1 | CD | OE2 | 119.5° | 120.0° |
CD | OE1 | HE1 | 117.2° | 120.0° |
O1 | CT | O2 | 118.7° | 120.0° |
CT | O2 | HO2 | 118.6° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | C | HN | 180.0° | 180.0° |
N | CA | CB | CT | 116.0° | 120.0° |
N | CA | CB | HA | 124.9° | 120.0° |
N | CA | CT | HA | 125.1° | 120.0° |
CA | N | C | O | 0.1° | 0.1° |
CA | N | C | C11 | 179.0° | 180.0° |
N | CA | CB | CG | 179.4° | 65.0° |
N | CA | CB | HB1 | 55.4° | 55.0° |
N | CA | CB | HB2 | 54.1° | 175.0° |
N | CA | CT | O1 | 150.4° | 0.0° |
N | CA | CT | O2 | 29.8° | 180.0° |
C | N | CA | CB | 82.8° | 155.0° |
C | N | CA | CT | 156.9° | 85.0° |
C | N | CA | HA | 38.2° | 35.0° |
N | C | O | C11 | 178.9° | 179.9° |
N | C | C11 | C12 | 22.4° | 180.0° |
N | C | C11 | C16 | 157.2° | 0.1° |
HN | N | CA | CB | 97.3° | 25.0° |
HN | N | CA | CT | 23.1° | 95.0° |
HN | N | CA | HA | 141.8° | 145.0° |
HN | N | C | O | 180.0° | 179.9° |
HN | N | C | C11 | 1.0° | 0.0° |
CB | CA | CT | HA | 121.6° | 120.0° |
CA | CB | CG | HB1 | 125.3° | 120.0° |
CA | CB | CG | HB2 | 125.2° | 120.0° |
CA | CB | HB1 | HB2 | 116.1° | 120.0° |
CA | CB | CG | CD | 179.8° | 180.0° |
CA | CB | CG | HG1 | 54.6° | 60.0° |
CA | CB | CG | HG2 | 54.9° | 60.0° |
CB | CA | CT | O1 | 96.4° | 120.0° |
CB | CA | CT | O2 | 83.5° | 60.0° |
CT | CA | CB | CG | 64.6° | 174.9° |
CT | CA | CB | HB1 | 60.6° | 65.1° |
CT | CA | CB | HB2 | 170.1° | 54.9° |
CA | CT | O1 | O2 | 179.9° | 180.0° |
CA | CT | O2 | HO2 | 180.0° | 180.0° |
HA | CA | CB | CG | 54.5° | 55.0° |
HA | CA | CB | HB1 | 179.8° | 175.0° |
HA | CA | CB | HB2 | 70.7° | 65.0° |
HA | CA | CT | O1 | 25.2° | 120.0° |
HA | CA | CT | O2 | 154.9° | 60.0° |
O | C | C11 | C12 | 158.7° | 0.1° |
O | C | C11 | C16 | 21.7° | 180.0° |
C | C11 | C12 | C16 | 179.5° | 179.9° |
C | C11 | C12 | C13 | 179.2° | 180.0° |
C | C11 | C12 | H12 | 0.8° | 0.0° |
C | C11 | C16 | C15 | 179.3° | 179.8° |
C | C11 | C16 | H16 | 0.8° | 0.0° |
O4 | C4 | C4A | N3 | 179.1° | 180.0° |
O4 | C4 | C4A | N5 | 0.8° | 0.4° |
O4 | C4 | C4A | C8A | 179.6° | 179.8° |
O4 | C4 | N3 | C2 | 179.9° | 179.9° |
C4 | C4A | N5 | C8A | 178.8° | 179.8° |
C4 | C4A | N5 | C6 | 155.8° | 164.2° |
C4 | C4A | N5 | HN5 | 30.5° | 15.8° |
C4 | C4A | C8A | N8 | 179.6° | 179.7° |
C4 | C4A | C8A | N1 | 1.4° | 0.0° |
C4A | C4 | N3 | C2 | 1.0° | 0.1° |
N3 | C4 | C4A | N5 | 179.9° | 179.6° |
N3 | C4 | C4A | C8A | 1.2° | 0.2° |
C4 | N3 | C2 | NA2 | 179.8° | 179.9° |
C4 | N3 | C2 | N1 | 0.8° | 0.3° |
C4A | N5 | C6 | HN5 | 125.2° | 180.0° |
C4A | N5 | C6 | C7 | 45.3° | 43.8° |
C4A | N5 | C6 | C9 | 73.2° | 75.9° |
C4A | N5 | C6 | H6 | 167.2° | 163.3° |
N5 | C4A | C8A | N8 | 0.6° | 0.4° |
N5 | C4A | C8A | N1 | 179.6° | 179.8° |
C8A | C4A | N5 | C6 | 25.4° | 16.0° |
C8A | C4A | N5 | HN5 | 150.6° | 164.0° |
C4A | C8A | N8 | C7 | 1.0° | 17.3° |
C4A | C8A | N8 | N1 | 179.0° | 179.7° |
C4A | C8A | N8 | HN8 | 124.3° | 162.7° |
C4A | C8A | N1 | C2 | 1.3° | 0.3° |
C4A | C8A | N1 | HN1 | 124.0° | 179.9° |
N5 | C6 | C7 | C9 | 121.1° | 119.7° |
N5 | C6 | C7 | H6 | 119.3° | 119.5° |
N5 | C6 | C9 | H6 | 119.4° | 120.8° |
N5 | C6 | C7 | N8 | 40.1° | 55.7° |
N5 | C6 | C7 | H71 | 165.4° | 175.3° |
N5 | C6 | C7 | H72 | 85.1° | 64.0° |
N5 | C6 | C9 | N10 | 59.4° | 56.5° |
N5 | C6 | C9 | H91 | 175.3° | 63.5° |
N5 | C6 | C9 | H92 | 65.9° | 176.5° |
HN5 | N5 | C6 | C7 | 170.5° | 136.2° |
HN5 | N5 | C6 | C9 | 52.1° | 104.1° |
HN5 | N5 | C6 | H6 | 67.6° | 16.7° |
C7 | C6 | C9 | H6 | 121.9° | 120.7° |
C6 | C7 | N8 | H71 | 125.3° | 119.6° |
C6 | C7 | N8 | H72 | 125.3° | 119.7° |
C6 | C7 | H71 | H72 | 117.2° | 120.6° |
C6 | C7 | N8 | C8A | 22.6° | 45.3° |
C6 | C7 | N8 | HN8 | 102.6° | 134.6° |
C7 | C6 | C9 | N10 | 178.1° | 175.0° |
C7 | C6 | C9 | H91 | 56.6° | 55.0° |
C7 | C6 | C9 | H92 | 52.9° | 65.0° |
C9 | C6 | C7 | N8 | 81.0° | 64.0° |
C9 | C6 | C7 | H71 | 44.3° | 55.7° |
C9 | C6 | C7 | H72 | 153.8° | 176.3° |
C6 | C9 | N10 | H91 | 125.3° | 120.0° |
C6 | C9 | N10 | H92 | 125.3° | 120.0° |
C6 | C9 | H91 | H92 | 116.3° | 120.0° |
C6 | C9 | N10 | C14 | 133.8° | 180.0° |
C6 | C9 | N10 | H10 | 8.6° | 0.0° |
H6 | C6 | C7 | N8 | 159.5° | 175.2° |
H6 | C6 | C7 | H71 | 75.2° | 65.1° |
H6 | C6 | C7 | H72 | 34.2° | 55.5° |
H6 | C6 | C9 | N10 | 60.0° | 64.3° |
H6 | C6 | C9 | H91 | 65.3° | 175.7° |
H6 | C6 | C9 | H92 | 174.8° | 55.7° |
N8 | C7 | H71 | H72 | 117.2° | 120.7° |
C7 | N8 | C8A | HN8 | 125.3° | 180.0° |
C7 | N8 | C8A | N1 | 179.9° | 163.0° |
H71 | C7 | N8 | C8A | 147.9° | 165.0° |
H71 | C7 | N8 | HN8 | 22.6° | 15.0° |
H72 | C7 | N8 | C8A | 102.6° | 74.3° |
H72 | C7 | N8 | HN8 | 132.1° | 105.7° |
N8 | C8A | N1 | C2 | 179.8° | 179.9° |
N8 | C8A | N1 | HN1 | 54.9° | 0.4° |
HN8 | N8 | C8A | N1 | 54.7° | 17.0° |
C8A | N1 | C2 | NA2 | 179.7° | 179.7° |
C8A | N1 | C2 | N3 | 0.9° | 0.4° |
C8A | N1 | C2 | HN1 | 125.3° | 179.5° |
N10 | C9 | H91 | H92 | 116.2° | 120.0° |
C9 | N10 | C14 | H10 | 125.3° | 179.9° |
C9 | N10 | C14 | C13 | 133.3° | 180.0° |
C9 | N10 | C14 | C15 | 46.3° | 0.3° |
H91 | C9 | N10 | C14 | 100.9° | 60.1° |
H91 | C9 | N10 | H10 | 133.8° | 120.0° |
H92 | C9 | N10 | C14 | 8.5° | 60.0° |
H92 | C9 | N10 | H10 | 116.7° | 119.9° |
N10 | C14 | C13 | C12 | 179.3° | 180.0° |
N10 | C14 | C13 | C15 | 179.6° | 179.7° |
N10 | C14 | C13 | H13 | 0.7° | 0.1° |
N10 | C14 | C15 | C16 | 179.3° | 179.8° |
N10 | C14 | C15 | H15 | 0.8° | 0.3° |
H10 | N10 | C14 | C13 | 101.4° | 0.1° |
H10 | N10 | C14 | C15 | 79.0° | 179.7° |
C11 | C12 | C13 | H12 | 180.0° | 180.0° |
C11 | C12 | C13 | C14 | 0.0° | 0.0° |
C11 | C12 | C13 | H13 | 180.0° | 180.0° |
C12 | C11 | C16 | C15 | 0.3° | 0.3° |
C12 | C11 | C16 | H16 | 179.7° | 180.0° |
C16 | C11 | C12 | C13 | 0.3° | 0.0° |
C16 | C11 | C12 | H12 | 179.7° | 180.0° |
C11 | C16 | C15 | C14 | 0.1° | 0.6° |
C11 | C16 | C15 | H16 | 180.0° | 179.8° |
C11 | C16 | C15 | H15 | 179.9° | 180.0° |
C12 | C13 | C14 | H13 | 180.0° | 179.9° |
C12 | C13 | C14 | C15 | 0.3° | 0.3° |
H12 | C12 | C13 | C14 | 180.0° | 180.0° |
H12 | C12 | C13 | H13 | 0.0° | 0.0° |
C13 | C14 | C15 | C16 | 0.3° | 0.6° |
C13 | C14 | C15 | H15 | 179.6° | 180.0° |
H13 | C13 | C14 | C15 | 179.7° | 179.7° |
C14 | C15 | C16 | H15 | 180.0° | 179.5° |
C14 | C15 | C16 | H16 | 180.0° | 179.7° |
H15 | C15 | C16 | H16 | 0.1° | 0.2° |
C2 | NA2 | HA21 | HA22 | 133.7° | 179.8° |
NA2 | C2 | N3 | N1 | 179.4° | 179.8° |
NA2 | C2 | N1 | HN1 | 55.1° | 0.2° |
HA21 | NA2 | C2 | N3 | 54.7° | 0.1° |
HA21 | NA2 | C2 | N1 | 125.8° | 179.7° |
HA22 | NA2 | C2 | N3 | 180.0° | 179.7° |
HA22 | NA2 | C2 | N1 | 0.6° | 0.5° |
N3 | C2 | N1 | HN1 | 124.3° | 180.0° |
CG | CB | HB1 | HB2 | 116.1° | 120.0° |
CB | CG | CD | HG1 | 125.3° | 120.1° |
CB | CG | CD | HG2 | 125.3° | 120.0° |
CB | CG | HG1 | HG2 | 116.3° | 120.0° |
CB | CG | CD | OE1 | 179.9° | 179.9° |
CB | CG | CD | OE2 | 0.1° | 0.0° |
HB1 | CB | CG | CD | 54.9° | 60.0° |
HB1 | CB | CG | HG1 | 179.8° | 180.0° |
HB1 | CB | CG | HG2 | 70.4° | 59.9° |
HB2 | CB | CG | CD | 54.6° | 60.0° |
HB2 | CB | CG | HG1 | 70.7° | 60.0° |
HB2 | CB | CG | HG2 | 179.9° | 180.0° |
CD | CG | HG1 | HG2 | 116.4° | 120.0° |
CG | CD | OE1 | OE2 | 179.8° | 180.0° |
CG | CD | OE1 | HE1 | 180.0° | 180.0° |
HG1 | CG | CD | OE1 | 54.6° | 60.0° |
HG1 | CG | CD | OE2 | 125.1° | 120.0° |
HG2 | CG | CD | OE1 | 54.8° | 60.0° |
HG2 | CG | CD | OE2 | 125.4° | 120.0° |
OE2 | CD | OE1 | HE1 | 0.2° | 0.1° |
O1 | CT | O2 | HO2 | 0.1° | 0.0° |