THI
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
S1 | C2 | sing | 1.84Å | 1.85Å | |
S1 | C12 | sing | 1.84Å | 1.82Å | |
C2 | C3 | sing | 1.55Å | 1.54Å | |
C2 | H21 | sing | 1.09Å | 1.10Å | |
C2 | H22 | sing | 1.09Å | 1.10Å | |
C3 | N4 | sing | 1.47Å | 1.46Å | |
C3 | H31 | sing | 1.09Å | 1.10Å | |
C3 | H32 | sing | 1.09Å | 1.10Å | |
N4 | C5 | sing | 1.35Å | 1.38Å | |
N4 | C12 | sing | 1.49Å | 1.48Å | |
C5 | O5 | doub | 1.22Å | 1.22Å | |
C5 | C6 | sing | 1.48Å | 1.48Å | |
C6 | C7 | doub | 1.39Å | 1.40Å | Aromatic |
C6 | C11 | sing | 1.40Å | 1.39Å | Aromatic |
C7 | C8 | sing | 1.38Å | 1.39Å | Aromatic |
C7 | H7 | sing | 1.08Å | 1.08Å | |
C8 | C9 | doub | 1.38Å | 1.40Å | Aromatic |
C8 | H8 | sing | 1.08Å | 1.09Å | |
C9 | C10 | sing | 1.38Å | 1.40Å | Aromatic |
C9 | H9 | sing | 1.08Å | 1.09Å | |
C10 | C11 | doub | 1.38Å | 1.39Å | Aromatic |
C10 | H10 | sing | 1.08Å | 1.09Å | |
C11 | C12 | sing | 1.50Å | 1.52Å | |
C12 | C1' | sing | 1.51Å | 1.54Å | |
C1' | C2' | doub | 1.38Å | 1.40Å | Aromatic |
C1' | C6' | sing | 1.38Å | 1.41Å | Aromatic |
C2' | C3' | sing | 1.38Å | 1.40Å | Aromatic |
C2' | H2' | sing | 1.08Å | 1.09Å | |
C3' | C4' | doub | 1.38Å | 1.40Å | Aromatic |
C3' | H3' | sing | 1.08Å | 1.09Å | |
C4' | C5' | sing | 1.38Å | 1.40Å | Aromatic |
C4' | H4' | sing | 1.08Å | 1.09Å | |
C5' | C6' | doub | 1.38Å | 1.39Å | Aromatic |
C5' | H5' | sing | 1.08Å | 1.09Å | |
C6' | H6' | sing | 1.08Å | 1.09Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | S1 | C12 | 95.4° | 98.1° |
S1 | C2 | C3 | 107.6° | 101.0° |
S1 | C2 | H21 | 109.0° | 111.2° |
S1 | C2 | H22 | 108.3° | 111.1° |
S1 | C12 | N4 | 102.4° | 100.1° |
S1 | C12 | C11 | 113.4° | 110.4° |
S1 | C12 | C1' | 115.0° | 113.1° |
C3 | C2 | H21 | 112.6° | 111.2° |
C3 | C2 | H22 | 112.7° | 111.1° |
C2 | C3 | N4 | 107.8° | 109.9° |
C2 | C3 | H31 | 111.3° | 109.4° |
C2 | C3 | H32 | 112.2° | 109.4° |
H21 | C2 | H22 | 106.5° | 110.9° |
N4 | C3 | H31 | 109.0° | 109.3° |
N4 | C3 | H32 | 109.2° | 109.4° |
C3 | N4 | C5 | 122.9° | 144.2° |
C3 | N4 | C12 | 118.4° | 109.5° |
H31 | C3 | H32 | 107.3° | 109.4° |
C5 | N4 | C12 | 112.7° | 106.3° |
N4 | C5 | O5 | 128.8° | 125.1° |
N4 | C5 | C6 | 105.9° | 109.6° |
N4 | C12 | C11 | 102.8° | 105.4° |
N4 | C12 | C1' | 113.1° | 113.3° |
O5 | C5 | C6 | 125.2° | 125.2° |
C5 | C6 | C7 | 127.6° | 132.6° |
C5 | C6 | C11 | 110.2° | 108.0° |
C7 | C6 | C11 | 122.1° | 119.4° |
C6 | C7 | C8 | 118.4° | 119.9° |
C6 | C7 | H7 | 121.6° | 120.1° |
C6 | C11 | C10 | 119.3° | 120.1° |
C6 | C11 | C12 | 107.9° | 106.2° |
C8 | C7 | H7 | 119.9° | 120.0° |
C7 | C8 | C9 | 119.7° | 120.2° |
C7 | C8 | H8 | 120.6° | 119.9° |
C9 | C8 | H8 | 119.7° | 119.9° |
C8 | C9 | C10 | 120.8° | 120.2° |
C8 | C9 | H9 | 119.3° | 119.9° |
C10 | C9 | H9 | 119.8° | 119.9° |
C9 | C10 | C11 | 119.5° | 120.1° |
C9 | C10 | H10 | 119.9° | 120.0° |
C11 | C10 | H10 | 120.6° | 120.0° |
C10 | C11 | C12 | 132.7° | 133.7° |
C11 | C12 | C1' | 109.5° | 113.5° |
C12 | C1' | C2' | 120.9° | 120.0° |
C12 | C1' | C6' | 122.9° | 120.0° |
C2' | C1' | C6' | 116.3° | 120.0° |
C1' | C2' | C3' | 122.0° | 120.0° |
C1' | C2' | H2' | 120.1° | 120.0° |
C1' | C6' | C5' | 122.2° | 120.0° |
C1' | C6' | H6' | 120.8° | 120.0° |
C3' | C2' | H2' | 117.9° | 120.0° |
C2' | C3' | C4' | 120.3° | 120.0° |
C2' | C3' | H3' | 120.0° | 120.0° |
C4' | C3' | H3' | 119.7° | 120.0° |
C3' | C4' | C5' | 118.8° | 120.0° |
C3' | C4' | H4' | 120.9° | 120.0° |
C5' | C4' | H4' | 120.4° | 120.0° |
C4' | C5' | C6' | 120.2° | 120.0° |
C4' | C5' | H5' | 120.0° | 120.0° |
C6' | C5' | H5' | 119.8° | 120.0° |
C5' | C6' | H6' | 117.0° | 119.9° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
S1 | C2 | C3 | H21 | 120.1° | 118.0° |
S1 | C2 | C3 | H22 | 119.4° | 117.9° |
S1 | C2 | H21 | H22 | 116.7° | 124.2° |
S1 | C2 | C3 | N4 | 7.7° | 28.7° |
S1 | C2 | C3 | H31 | 111.7° | 91.3° |
S1 | C2 | C3 | H32 | 128.0° | 148.9° |
C2 | S1 | C12 | N4 | 21.3° | 22.7° |
C2 | S1 | C12 | C11 | 131.3° | 133.4° |
C2 | S1 | C12 | C1' | 101.7° | 98.2° |
C12 | S1 | C2 | C3 | 8.5° | 2.4° |
C12 | S1 | C2 | H21 | 113.9° | 120.4° |
C12 | S1 | C2 | H22 | 130.6° | 115.5° |
S1 | C12 | N4 | C3 | 32.3° | 43.9° |
S1 | C12 | N4 | C5 | 121.1° | 135.1° |
S1 | C12 | N4 | C11 | 117.8° | 114.6° |
S1 | C12 | N4 | C1' | 124.3° | 120.7° |
S1 | C12 | C11 | C6 | 116.1° | 119.3° |
S1 | C12 | C11 | C10 | 61.2° | 60.4° |
S1 | C12 | C11 | C1' | 129.9° | 128.1° |
S1 | C12 | C1' | C2' | 71.5° | 31.0° |
S1 | C12 | C1' | C6' | 110.1° | 149.2° |
C3 | C2 | H21 | H22 | 124.1° | 124.2° |
C2 | C3 | N4 | H31 | 120.9° | 120.1° |
C2 | C3 | N4 | H32 | 122.2° | 120.2° |
C2 | C3 | H31 | H32 | 123.1° | 119.8° |
C2 | C3 | N4 | C5 | 123.3° | 127.6° |
C2 | C3 | N4 | C12 | 27.4° | 50.8° |
H21 | C2 | C3 | N4 | 127.8° | 146.7° |
H21 | C2 | C3 | H31 | 8.4° | 26.7° |
H21 | C2 | C3 | H32 | 111.9° | 93.1° |
H22 | C2 | C3 | N4 | 111.6° | 89.2° |
H22 | C2 | C3 | H31 | 128.9° | 150.8° |
H22 | C2 | C3 | H32 | 8.7° | 31.0° |
N4 | C3 | H31 | H32 | 118.1° | 119.8° |
C3 | N4 | C5 | C12 | 152.1° | 178.4° |
C3 | N4 | C5 | O5 | 24.5° | 22.5° |
C3 | N4 | C5 | C6 | 152.9° | 157.3° |
C3 | N4 | C12 | C11 | 150.2° | 158.5° |
C3 | N4 | C12 | C1' | 92.0° | 76.8° |
H31 | C3 | N4 | C5 | 115.8° | 112.3° |
H31 | C3 | N4 | C12 | 93.5° | 69.3° |
H32 | C3 | N4 | C5 | 1.1° | 7.4° |
H32 | C3 | N4 | C12 | 149.5° | 170.9° |
N4 | C5 | O5 | C6 | 176.9° | 179.7° |
N4 | C5 | C6 | C7 | 179.0° | 167.9° |
N4 | C5 | C6 | C11 | 5.1° | 13.8° |
C5 | N4 | C12 | C11 | 3.3° | 20.6° |
C5 | N4 | C12 | C1' | 114.6° | 104.2° |
C12 | N4 | C5 | O5 | 176.6° | 159.1° |
C12 | N4 | C5 | C6 | 0.8° | 21.1° |
N4 | C12 | C11 | C6 | 6.4° | 12.0° |
N4 | C12 | C11 | C10 | 170.9° | 167.7° |
N4 | C12 | C11 | C1' | 120.4° | 124.6° |
N4 | C12 | C1' | C2' | 171.4° | 144.1° |
N4 | C12 | C1' | C6' | 7.0° | 36.1° |
O5 | C5 | C6 | C7 | 3.5° | 11.8° |
O5 | C5 | C6 | C11 | 172.4° | 166.5° |
C5 | C6 | C7 | C11 | 175.4° | 178.2° |
C5 | C6 | C7 | C8 | 172.9° | 179.6° |
C5 | C6 | C7 | H7 | 7.4° | 0.6° |
C5 | C6 | C11 | C10 | 170.5° | 179.8° |
C5 | C6 | C11 | C12 | 7.2° | 0.1° |
C6 | C7 | C8 | H7 | 179.8° | 179.8° |
C6 | C7 | C8 | C9 | 1.7° | 0.5° |
C6 | C7 | C8 | H8 | 177.8° | 179.5° |
C7 | C6 | C11 | C10 | 5.6° | 1.6° |
C7 | C6 | C11 | C12 | 176.7° | 178.7° |
C11 | C6 | C7 | C8 | 2.5° | 1.4° |
C11 | C6 | C7 | H7 | 177.3° | 178.8° |
C6 | C11 | C10 | C9 | 4.4° | 0.9° |
C6 | C11 | C10 | C12 | 177.1° | 179.6° |
C6 | C11 | C10 | H10 | 175.5° | 179.2° |
C6 | C11 | C12 | C1' | 114.0° | 112.6° |
C7 | C8 | C9 | H8 | 179.5° | 180.0° |
C7 | C8 | C9 | C10 | 2.9° | 0.3° |
C7 | C8 | C9 | H9 | 179.4° | 179.8° |
H7 | C7 | C8 | C9 | 178.5° | 179.7° |
H7 | C7 | C8 | H8 | 2.0° | 0.3° |
C8 | C9 | C10 | H9 | 177.7° | 180.0° |
C8 | C9 | C10 | C11 | 0.2° | 0.0° |
C8 | C9 | C10 | H10 | 179.6° | 179.9° |
H8 | C8 | C9 | C10 | 176.7° | 179.8° |
H8 | C8 | C9 | H9 | 1.0° | 0.2° |
C9 | C10 | C11 | H10 | 179.8° | 179.9° |
C9 | C10 | C11 | C12 | 178.6° | 179.5° |
H9 | C9 | C10 | C11 | 177.4° | 180.0° |
H9 | C9 | C10 | H10 | 2.7° | 0.1° |
C10 | C11 | C12 | C1' | 68.6° | 67.8° |
H10 | C10 | C11 | C12 | 1.6° | 0.4° |
C11 | C12 | C1' | C2' | 57.5° | 95.7° |
C11 | C12 | C1' | C6' | 120.9° | 84.0° |
C12 | C1' | C2' | C6' | 178.5° | 179.7° |
C12 | C1' | C2' | C3' | 173.3° | 180.0° |
C12 | C1' | C2' | H2' | 5.7° | 0.0° |
C12 | C1' | C6' | C5' | 175.6° | 179.8° |
C12 | C1' | C6' | H6' | 4.1° | 0.2° |
C1' | C2' | C3' | H2' | 179.0° | 180.0° |
C1' | C2' | C3' | C4' | 3.5° | 0.0° |
C1' | C2' | C3' | H3' | 175.4° | 179.9° |
C2' | C1' | C6' | C5' | 2.9° | 0.4° |
C2' | C1' | C6' | H6' | 177.4° | 180.0° |
C6' | C1' | C2' | C3' | 5.3° | 0.2° |
C6' | C1' | C2' | H2' | 175.7° | 179.8° |
C1' | C6' | C5' | C4' | 1.3° | 0.4° |
C1' | C6' | C5' | H6' | 179.7° | 179.6° |
C1' | C6' | C5' | H5' | 179.7° | 179.8° |
C2' | C3' | C4' | H3' | 178.9° | 180.0° |
C2' | C3' | C4' | C5' | 0.9° | 0.1° |
C2' | C3' | C4' | H4' | 179.8° | 179.9° |
H2' | C2' | C3' | C4' | 177.5° | 179.9° |
H2' | C2' | C3' | H3' | 3.6° | 0.1° |
C3' | C4' | C5' | H4' | 179.3° | 179.9° |
C3' | C4' | C5' | C6' | 3.2° | 0.2° |
C3' | C4' | C5' | H5' | 177.7° | 179.9° |
H3' | C3' | C4' | C5' | 179.8° | 179.9° |
H3' | C3' | C4' | H4' | 0.9° | 0.1° |
C4' | C5' | C6' | H5' | 179.1° | 179.8° |
C4' | C5' | C6' | H6' | 178.5° | 179.9° |
H4' | C4' | C5' | C6' | 177.5° | 179.9° |
H4' | C4' | C5' | H5' | 1.6° | 0.1° |
H5' | C5' | C6' | H6' | 0.6° | 0.1° |