THH
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
OE1 | CD | sing | 1.34Å | 1.27Å | |
OE1 | HE1 | sing | 0.97Å | 0.95Å | |
CD | OE2 | doub | 1.21Å | 1.26Å | |
CD | CG | sing | 1.51Å | 1.52Å | |
CG | CB | sing | 1.53Å | 1.52Å | |
CG | HG1 | sing | 1.09Å | 1.12Å | |
CG | HG2 | sing | 1.09Å | 1.11Å | |
CB | CA | sing | 1.53Å | 1.51Å | |
CB | HB1 | sing | 1.09Å | 1.11Å | |
CB | HB2 | sing | 1.09Å | 1.12Å | |
CA | CT | sing | 1.51Å | 1.50Å | |
CA | N | sing | 1.47Å | 1.44Å | |
CA | HA | sing | 1.09Å | 1.12Å | |
CT | O1 | doub | 1.21Å | 1.25Å | |
CT | O2 | sing | 1.34Å | 1.25Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
N | C | sing | 1.35Å | 1.34Å | |
N | HN | sing | 0.97Å | 1.02Å | |
C | O | doub | 1.22Å | 1.23Å | |
C | C12 | sing | 1.47Å | 1.52Å | |
C12 | C13 | sing | 1.40Å | 1.42Å | Aromatic |
C12 | C17 | doub | 1.40Å | 1.40Å | Aromatic |
C13 | C14 | doub | 1.38Å | 1.44Å | Aromatic |
C13 | H13 | sing | 1.08Å | 1.10Å | |
C14 | C15 | sing | 1.39Å | 1.41Å | Aromatic |
C14 | H14 | sing | 1.08Å | 1.10Å | |
C15 | C16 | doub | 1.39Å | 1.40Å | Aromatic |
C15 | N10 | sing | 1.39Å | 1.33Å | |
C16 | C17 | sing | 1.38Å | 1.40Å | Aromatic |
C16 | H16 | sing | 1.08Å | 1.10Å | |
C17 | H17 | sing | 1.08Å | 1.10Å | |
N10 | C9 | sing | 1.47Å | 1.47Å | |
N10 | H10 | sing | 0.97Å | 1.02Å | |
C9 | C6 | sing | 1.53Å | 1.53Å | |
C9 | H91 | sing | 1.09Å | 1.11Å | |
C9 | H92 | sing | 1.09Å | 1.11Å | |
C6 | C7 | sing | 1.54Å | 1.51Å | |
C6 | N5 | sing | 1.46Å | 1.49Å | |
C6 | H6 | sing | 1.09Å | 1.11Å | |
C7 | N8 | sing | 1.47Å | 1.45Å | |
C7 | H71 | sing | 1.09Å | 1.11Å | |
C7 | H72 | sing | 1.09Å | 1.11Å | |
N8 | C8A | sing | 1.39Å | 1.35Å | |
N8 | HN8 | sing | 0.97Å | 1.02Å | |
C8A | N1 | sing | 1.33Å | 1.37Å | Aromatic |
C8A | C4A | doub | 1.39Å | 1.51Å | Aromatic |
N1 | C2 | doub | 1.32Å | 1.33Å | Aromatic |
C4A | N5 | sing | 1.40Å | 1.41Å | |
C4A | C4 | sing | 1.40Å | 1.48Å | Aromatic |
N5 | C11 | sing | 1.47Å | 1.44Å | |
C11 | H111 | sing | 1.09Å | 1.12Å | |
C11 | H112 | sing | 1.09Å | 1.11Å | |
C11 | H113 | sing | 1.09Å | 1.12Å | |
C4 | O4 | sing | 1.36Å | 1.32Å | |
C4 | N3 | doub | 1.33Å | 1.38Å | Aromatic |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
N3 | C2 | sing | 1.32Å | 1.38Å | Aromatic |
C2 | NA2 | sing | 1.39Å | 1.35Å | |
NA2 | HA21 | sing | 0.97Å | 1.02Å | |
NA2 | HA22 | sing | 0.97Å | 1.02Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CD | OE1 | HE1 | 120.7° | 120.0° |
OE1 | CD | OE2 | 120.8° | 120.0° |
OE1 | CD | CG | 114.6° | 119.9° |
OE2 | CD | CG | 124.7° | 120.0° |
CD | CG | CB | 110.0° | 109.5° |
CD | CG | HG1 | 112.0° | 109.5° |
CD | CG | HG2 | 112.0° | 109.5° |
CB | CG | HG1 | 112.0° | 109.5° |
CB | CG | HG2 | 112.0° | 109.4° |
CG | CB | CA | 110.8° | 109.5° |
CG | CB | HB1 | 111.7° | 109.5° |
CG | CB | HB2 | 111.7° | 109.5° |
HG1 | CG | HG2 | 98.4° | 109.5° |
CA | CB | HB1 | 111.8° | 109.4° |
CA | CB | HB2 | 111.7° | 109.4° |
CB | CA | CT | 115.4° | 109.5° |
CB | CA | N | 109.2° | 109.5° |
CB | CA | HA | 105.5° | 109.5° |
HB1 | CB | HB2 | 98.7° | 109.5° |
CT | CA | N | 109.3° | 109.5° |
CT | CA | HA | 105.3° | 109.4° |
CA | CT | O1 | 121.2° | 120.0° |
CA | CT | O2 | 115.1° | 120.0° |
N | CA | HA | 112.1° | 109.5° |
CA | N | C | 121.8° | 120.0° |
CA | N | HN | 122.9° | 120.0° |
O1 | CT | O2 | 123.7° | 120.0° |
CT | O2 | HO2 | 115.1° | 120.0° |
C | N | HN | 115.3° | 120.0° |
N | C | O | 128.0° | 120.0° |
N | C | C12 | 115.3° | 120.0° |
O | C | C12 | 116.6° | 120.0° |
C | C12 | C13 | 126.1° | 120.1° |
C | C12 | C17 | 121.3° | 120.1° |
C13 | C12 | C17 | 112.6° | 119.8° |
C12 | C13 | C14 | 125.0° | 119.9° |
C12 | C13 | H13 | 116.9° | 120.0° |
C12 | C17 | C16 | 122.6° | 120.0° |
C12 | C17 | H17 | 118.7° | 120.0° |
C14 | C13 | H13 | 118.1° | 120.0° |
C13 | C14 | C15 | 120.4° | 120.0° |
C13 | C14 | H14 | 120.9° | 120.0° |
C15 | C14 | H14 | 118.7° | 120.0° |
C14 | C15 | C16 | 114.2° | 120.2° |
C14 | C15 | N10 | 130.7° | 119.9° |
C16 | C15 | N10 | 115.1° | 119.9° |
C15 | C16 | C17 | 125.2° | 120.0° |
C15 | C16 | H16 | 117.4° | 120.0° |
C15 | N10 | C9 | 123.2° | 120.0° |
C15 | N10 | H10 | 107.3° | 120.0° |
C17 | C16 | H16 | 117.4° | 120.0° |
C16 | C17 | H17 | 118.7° | 120.0° |
C9 | N10 | H10 | 107.3° | 120.0° |
N10 | C9 | C6 | 105.6° | 109.5° |
N10 | C9 | H91 | 113.7° | 109.4° |
N10 | C9 | H92 | 113.7° | 109.5° |
C6 | C9 | H91 | 113.7° | 109.5° |
C6 | C9 | H92 | 113.7° | 109.5° |
C9 | C6 | C7 | 121.3° | 109.5° |
C9 | C6 | N5 | 113.0° | 109.5° |
C9 | C6 | H6 | 97.7° | 109.5° |
H91 | C9 | H92 | 96.8° | 109.5° |
C7 | C6 | N5 | 111.7° | 109.4° |
C7 | C6 | H6 | 99.5° | 109.5° |
C6 | C7 | N8 | 110.2° | 106.9° |
C6 | C7 | H71 | 111.9° | 110.0° |
C6 | C7 | H72 | 112.0° | 109.9° |
N5 | C6 | H6 | 111.2° | 109.5° |
C6 | N5 | C4A | 118.3° | 109.7° |
C6 | N5 | C11 | 125.4° | 106.7° |
N8 | C7 | H71 | 111.9° | 110.0° |
N8 | C7 | H72 | 111.9° | 110.0° |
C7 | N8 | C8A | 124.6° | 117.0° |
C7 | N8 | HN8 | 106.9° | 121.4° |
H71 | C7 | H72 | 98.4° | 110.0° |
C8A | N8 | HN8 | 106.9° | 121.5° |
N8 | C8A | N1 | 113.7° | 119.7° |
N8 | C8A | C4A | 119.2° | 120.6° |
N1 | C8A | C4A | 127.1° | 119.7° |
C8A | N1 | C2 | 118.6° | 120.6° |
C8A | C4A | N5 | 116.6° | 123.1° |
C8A | C4A | C4 | 111.5° | 117.9° |
N1 | C2 | N3 | 117.3° | 121.6° |
N1 | C2 | NA2 | 123.0° | 119.2° |
N5 | C4A | C4 | 131.9° | 119.1° |
C4A | N5 | C11 | 116.2° | 106.7° |
C4A | C4 | O4 | 131.4° | 120.4° |
C4A | C4 | N3 | 114.7° | 119.1° |
N5 | C11 | H111 | 106.6° | 109.5° |
N5 | C11 | H112 | 125.4° | 109.5° |
N5 | C11 | H113 | 106.6° | 109.6° |
H111 | C11 | H112 | 106.6° | 109.4° |
H111 | C11 | H113 | 103.0° | 109.5° |
H112 | C11 | H113 | 106.6° | 109.4° |
O4 | C4 | N3 | 113.9° | 120.5° |
C4 | O4 | HO4 | 131.4° | 106.8° |
C4 | N3 | C2 | 130.7° | 121.1° |
N3 | C2 | NA2 | 119.6° | 119.2° |
C2 | NA2 | HA21 | 107.4° | 120.0° |
C2 | NA2 | HA22 | 123.0° | 120.1° |
HA21 | NA2 | HA22 | 107.4° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
OE1 | CD | OE2 | CG | 179.4° | 179.9° |
OE1 | CD | CG | CB | 65.4° | 180.0° |
OE1 | CD | CG | HG1 | 59.8° | 60.0° |
OE1 | CD | CG | HG2 | 169.3° | 60.1° |
HE1 | OE1 | CD | OE2 | 180.0° | 0.0° |
HE1 | OE1 | CD | CG | 0.6° | 180.0° |
OE2 | CD | CG | CB | 115.2° | 0.0° |
OE2 | CD | CG | HG1 | 119.6° | 120.0° |
OE2 | CD | CG | HG2 | 10.1° | 120.0° |
CD | CG | CB | HG1 | 125.3° | 120.0° |
CD | CG | CB | HG2 | 125.3° | 120.0° |
CD | CG | HG1 | HG2 | 117.9° | 120.0° |
CD | CG | CB | CA | 171.9° | 180.0° |
CD | CG | CB | HB1 | 46.6° | 60.0° |
CD | CG | CB | HB2 | 62.9° | 60.0° |
CB | CG | HG1 | HG2 | 117.9° | 119.9° |
CG | CB | CA | HB1 | 125.2° | 120.0° |
CG | CB | CA | HB2 | 125.3° | 120.0° |
CG | CB | HB1 | HB2 | 117.7° | 120.0° |
CG | CB | CA | CT | 158.9° | 180.0° |
CG | CB | CA | N | 77.5° | 60.0° |
CG | CB | CA | HA | 43.1° | 60.0° |
HG1 | CG | CB | CA | 62.8° | 60.0° |
HG1 | CG | CB | HB1 | 171.9° | 180.0° |
HG1 | CG | CB | HB2 | 62.4° | 60.0° |
HG2 | CG | CB | CA | 46.6° | 60.0° |
HG2 | CG | CB | HB1 | 78.6° | 60.0° |
HG2 | CG | CB | HB2 | 171.9° | 180.0° |
CA | CB | HB1 | HB2 | 117.6° | 119.9° |
CB | CA | CT | N | 123.5° | 120.0° |
CB | CA | CT | HA | 115.9° | 120.0° |
CB | CA | N | HA | 116.5° | 120.0° |
CB | CA | CT | O1 | 75.9° | 90.0° |
CB | CA | CT | O2 | 105.1° | 90.0° |
CB | CA | N | C | 122.9° | 150.0° |
CB | CA | N | HN | 57.1° | 30.0° |
HB1 | CB | CA | CT | 75.9° | 60.0° |
HB1 | CB | CA | N | 47.7° | 60.0° |
HB1 | CB | CA | HA | 168.3° | 180.0° |
HB2 | CB | CA | CT | 33.6° | 60.0° |
HB2 | CB | CA | N | 157.2° | 180.0° |
HB2 | CB | CA | HA | 82.2° | 60.0° |
CT | CA | N | HA | 116.4° | 120.0° |
CA | CT | O1 | O2 | 178.9° | 180.0° |
CA | CT | O2 | HO2 | 180.0° | 180.0° |
CT | CA | N | C | 110.0° | 90.0° |
CT | CA | N | HN | 70.0° | 90.0° |
N | CA | CT | O1 | 47.6° | 150.0° |
N | CA | CT | O2 | 131.4° | 30.0° |
CA | N | C | HN | 180.0° | 179.9° |
CA | N | C | O | 0.2° | 0.0° |
CA | N | C | C12 | 178.9° | 180.0° |
HA | CA | CT | O1 | 168.2° | 30.0° |
HA | CA | CT | O2 | 10.8° | 150.0° |
HA | CA | N | C | 6.3° | 30.0° |
HA | CA | N | HN | 173.7° | 150.1° |
O1 | CT | O2 | HO2 | 1.0° | 0.0° |
N | C | O | C12 | 179.1° | 180.0° |
N | C | C12 | C13 | 35.1° | 180.0° |
N | C | C12 | C17 | 145.6° | 0.0° |
HN | N | C | O | 179.8° | 180.0° |
HN | N | C | C12 | 1.1° | 0.1° |
O | C | C12 | C13 | 144.2° | 0.0° |
O | C | C12 | C17 | 35.2° | 180.0° |
C | C12 | C13 | C17 | 179.4° | 180.0° |
C | C12 | C13 | C14 | 179.3° | 179.9° |
C | C12 | C13 | H13 | 0.7° | 0.0° |
C | C12 | C17 | C16 | 179.3° | 179.8° |
C | C12 | C17 | H17 | 0.7° | 0.1° |
C12 | C13 | C14 | H13 | 180.0° | 180.0° |
C12 | C13 | C14 | C15 | 0.1° | 0.0° |
C12 | C13 | C14 | H14 | 179.9° | 180.0° |
C13 | C12 | C17 | C16 | 0.2° | 0.2° |
C13 | C12 | C17 | H17 | 179.8° | 179.9° |
C17 | C12 | C13 | C14 | 0.1° | 0.1° |
C17 | C12 | C13 | H13 | 179.9° | 180.0° |
C12 | C17 | C16 | C15 | 0.0° | 0.5° |
C12 | C17 | C16 | H17 | 180.0° | 179.8° |
C12 | C17 | C16 | H16 | 180.0° | 179.9° |
C13 | C14 | C15 | H14 | 180.0° | 180.0° |
C13 | C14 | C15 | C16 | 0.2° | 0.3° |
C13 | C14 | C15 | N10 | 179.4° | 179.9° |
H13 | C13 | C14 | C15 | 180.0° | 180.0° |
H13 | C13 | C14 | H14 | 0.0° | 0.0° |
C14 | C15 | C16 | N10 | 179.6° | 179.7° |
C14 | C15 | C16 | C17 | 0.1° | 0.5° |
C14 | C15 | C16 | H16 | 179.9° | 180.0° |
C14 | C15 | N10 | C9 | 89.3° | 180.0° |
C14 | C15 | N10 | H10 | 36.0° | 0.1° |
H14 | C14 | C15 | C16 | 179.8° | 179.7° |
H14 | C14 | C15 | N10 | 0.6° | 0.0° |
C15 | C16 | C17 | H16 | 180.0° | 179.4° |
C15 | C16 | C17 | H17 | 179.9° | 179.7° |
C16 | C15 | N10 | C9 | 91.1° | 0.4° |
C16 | C15 | N10 | H10 | 143.6° | 179.8° |
N10 | C15 | C16 | C17 | 179.5° | 179.8° |
N10 | C15 | C16 | H16 | 0.5° | 0.4° |
C15 | N10 | C9 | H10 | 125.3° | 179.9° |
C15 | N10 | C9 | C6 | 146.3° | 175.0° |
C15 | N10 | C9 | H91 | 21.0° | 65.0° |
C15 | N10 | C9 | H92 | 88.4° | 55.0° |
H16 | C16 | C17 | H17 | 0.1° | 0.2° |
N10 | C9 | C6 | H91 | 125.3° | 119.9° |
N10 | C9 | C6 | H92 | 125.3° | 120.1° |
N10 | C9 | H91 | H92 | 119.6° | 120.0° |
N10 | C9 | C6 | C7 | 156.2° | 63.6° |
N10 | C9 | C6 | N5 | 19.3° | 176.4° |
N10 | C9 | C6 | H6 | 97.6° | 56.4° |
H10 | N10 | C9 | C6 | 88.4° | 4.9° |
H10 | N10 | C9 | H91 | 146.3° | 115.1° |
H10 | N10 | C9 | H92 | 36.9° | 124.9° |
C6 | C9 | H91 | H92 | 119.6° | 120.0° |
C9 | C6 | C7 | N5 | 137.4° | 120.0° |
C9 | C6 | C7 | H6 | 105.2° | 120.0° |
C9 | C6 | N5 | H6 | 108.7° | 120.1° |
C9 | C6 | C7 | N8 | 89.1° | 175.8° |
C9 | C6 | C7 | H71 | 36.1° | 56.4° |
C9 | C6 | C7 | H72 | 145.6° | 64.9° |
C9 | C6 | N5 | C4A | 94.3° | 177.0° |
C9 | C6 | N5 | C11 | 88.8° | 67.8° |
H91 | C9 | C6 | C7 | 30.9° | 176.4° |
H91 | C9 | C6 | N5 | 106.0° | 56.5° |
H91 | C9 | C6 | H6 | 137.1° | 63.5° |
H92 | C9 | C6 | C7 | 78.5° | 56.4° |
H92 | C9 | C6 | N5 | 144.6° | 63.5° |
H92 | C9 | C6 | H6 | 27.7° | 176.4° |
C7 | C6 | N5 | H6 | 110.2° | 120.0° |
C6 | C7 | N8 | H71 | 125.3° | 119.4° |
C6 | C7 | N8 | H72 | 125.3° | 119.3° |
C6 | C7 | H71 | H72 | 117.9° | 121.3° |
C6 | C7 | N8 | C8A | 30.0° | 39.2° |
C6 | C7 | N8 | HN8 | 95.3° | 140.8° |
C7 | C6 | N5 | C4A | 46.8° | 57.0° |
C7 | C6 | N5 | C11 | 130.2° | 172.2° |
N5 | C6 | C7 | N8 | 48.3° | 64.2° |
N5 | C6 | C7 | H71 | 173.5° | 176.5° |
N5 | C6 | C7 | H72 | 77.0° | 55.1° |
C6 | N5 | C4A | C8A | 21.5° | 25.7° |
C6 | N5 | C4A | C11 | 177.2° | 115.2° |
C6 | N5 | C4A | C4 | 159.0° | 154.6° |
C6 | N5 | C11 | H111 | 54.7° | 39.7° |
C6 | N5 | C11 | H112 | 180.0° | 80.3° |
C6 | N5 | C11 | H113 | 54.7° | 159.7° |
H6 | C6 | C7 | N8 | 165.7° | 55.8° |
H6 | C6 | C7 | H71 | 69.0° | 63.6° |
H6 | C6 | C7 | H72 | 40.4° | 175.1° |
H6 | C6 | N5 | C4A | 157.0° | 63.0° |
H6 | C6 | N5 | C11 | 19.9° | 52.3° |
N8 | C7 | H71 | H72 | 117.8° | 121.3° |
C7 | N8 | C8A | HN8 | 125.3° | 179.9° |
C7 | N8 | C8A | N1 | 175.0° | 171.0° |
C7 | N8 | C8A | C4A | 5.2° | 9.1° |
H71 | C7 | N8 | C8A | 155.2° | 158.6° |
H71 | C7 | N8 | HN8 | 30.0° | 21.5° |
H72 | C7 | N8 | C8A | 95.3° | 80.1° |
H72 | C7 | N8 | HN8 | 139.4° | 99.9° |
N8 | C8A | N1 | C4A | 179.8° | 179.9° |
N8 | C8A | N1 | C2 | 180.0° | 179.5° |
N8 | C8A | C4A | N5 | 0.3° | 0.8° |
N8 | C8A | C4A | C4 | 179.2° | 179.5° |
HN8 | N8 | C8A | N1 | 59.8° | 8.9° |
HN8 | N8 | C8A | C4A | 120.1° | 170.9° |
N1 | C8A | C4A | N5 | 179.5° | 179.3° |
N1 | C8A | C4A | C4 | 0.9° | 0.4° |
C8A | N1 | C2 | N3 | 0.5° | 0.1° |
C8A | N1 | C2 | NA2 | 179.5° | 180.0° |
C4A | C8A | N1 | C2 | 0.1° | 0.3° |
C8A | C4A | N5 | C4 | 179.5° | 179.6° |
C8A | C4A | N5 | C11 | 155.7° | 141.0° |
C8A | C4A | C4 | O4 | 179.4° | 179.9° |
C8A | C4A | C4 | N3 | 1.0° | 0.1° |
N1 | C2 | N3 | C4 | 0.4° | 0.1° |
N1 | C2 | N3 | NA2 | 179.9° | 179.9° |
N1 | C2 | NA2 | HA21 | 54.8° | 180.0° |
N1 | C2 | NA2 | HA22 | 180.0° | 0.1° |
C4A | N5 | C11 | H111 | 122.3° | 156.9° |
C4A | N5 | C11 | H112 | 3.0° | 37.0° |
C4A | N5 | C11 | H113 | 128.3° | 83.0° |
N5 | C4A | C4 | O4 | 0.1° | 0.5° |
N5 | C4A | C4 | N3 | 179.5° | 179.5° |
C4 | C4A | N5 | C11 | 23.8° | 39.4° |
C4A | C4 | O4 | N3 | 179.6° | 180.0° |
C4A | C4 | O4 | HO4 | 180.0° | 90.0° |
C4A | C4 | N3 | C2 | 0.5° | 0.1° |
N5 | C11 | H111 | H112 | 136.0° | 120.0° |
N5 | C11 | H111 | H113 | 112.0° | 120.1° |
N5 | C11 | H112 | H113 | 125.3° | 120.1° |
H111 | C11 | H112 | H113 | 109.5° | 119.9° |
O4 | C4 | N3 | C2 | 179.8° | 179.9° |
N3 | C4 | O4 | HO4 | 0.3° | 90.0° |
C4 | N3 | C2 | NA2 | 179.7° | 179.8° |
N3 | C2 | NA2 | HA21 | 125.3° | 0.1° |
N3 | C2 | NA2 | HA22 | 0.1° | 180.0° |
C2 | NA2 | HA21 | HA22 | 134.2° | 179.9° |