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TGD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O5C5sing1.43Å1.42Å
O6C6sing1.43Å1.42Å
C5C6sing1.53Å1.52Å
C5C4sing1.53Å1.53Å
O4C4sing1.43Å1.42Å
C4C3sing1.53Å1.53Å
C3C2sing1.51Å1.52Å
C3O3sing1.43Å1.42Å
C1C2sing1.51Å1.51Å
C2O2doub1.21Å1.23Å
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C3H4sing1.09Å1.10Å
C4H5sing1.09Å1.10Å
O3H6sing0.97Å0.95Å
O4H7sing0.97Å0.95Å
C5H8sing1.09Å1.10Å
O5H9sing0.97Å0.95Å
C6H10sing1.09Å1.10Å
C6H11sing1.09Å1.10Å
O6H12sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O5C5C6110.0°109.5°
O5C5C4109.6°109.5°
O5C5H8110.0°109.5°
C5O5H9109.5°114.0°
O6C6C5109.7°109.5°
O6C6H10109.4°109.5°
O6C6H11109.4°109.4°
C6O6H12109.5°114.0°
C6C5C4110.0°109.5°
C6C5H8108.6°109.4°
C5C6H10109.4°109.5°
C5C6H11109.4°109.4°
C5C4O4109.5°109.5°
C5C4C3110.6°109.5°
C5C4H5108.3°109.5°
C4C5H8108.6°109.5°
O4C4C3110.3°109.4°
O4C4H5109.8°109.5°
C4O4H7109.5°114.0°
C4C3C2110.2°109.5°
C4C3O3109.5°109.4°
C4C3H4108.7°109.4°
C3C4H5108.3°109.4°
C2C3O3109.2°109.5°
C3C2C1119.4°120.0°
C3C2O2119.3°120.0°
C2C3H4108.9°109.5°
O3C3H4110.3°109.4°
C3O3H6109.5°114.0°
C1C2O2120.0°120.0°
C2C1H1109.5°109.4°
C2C1H2109.5°109.5°
C2C1H3109.5°109.5°
H1C1H2109.4°109.5°
H1C1H3109.5°109.4°
H2C1H3109.4°109.5°
H10C6H11109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O5C5C6O677.7°64.9°
O5C5C6C4120.8°120.0°
O5C5C6H8120.5°120.0°
O5C5C4H8120.2°120.0°
O5C5C4O444.4°65.0°
O5C5C4C3166.2°55.0°
O5C5C4H575.3°175.0°
O5C5C6H1042.3°175.0°
O5C5C6H11162.3°55.0°
O6C6C5H10120.0°120.1°
O6C6C5H11120.0°119.9°
O6C6C5C4161.5°175.0°
O6C6C5H842.7°55.0°
O6C6H10H11119.9°120.0°
C6C5C4H8118.8°119.9°
C6C5C4O4165.4°55.1°
C6C5C4C372.8°175.1°
C6C5C4H545.8°65.0°
C6C5O5H9180.0°60.0°
C5C6H10H11119.9°120.0°
C5C6O6H12180.0°179.9°
C5C4O4C3121.9°120.0°
C5C4O4H5118.8°120.1°
C5C4C3H5118.6°120.0°
C5C4C3C2164.7°180.0°
C5C4C3O375.1°60.0°
C5C4C3H445.5°59.9°
C5C4O4H7180.0°59.9°
C4C5O5H958.9°60.0°
C4C5C6H1078.5°54.9°
C4C5C6H1141.5°65.1°
O4C4C3H5120.2°119.9°
O4C4C3C243.5°60.0°
O4C4C3O3163.6°180.0°
O4C4C3H475.8°60.1°
O4C4C5H875.8°175.0°
C4C3C2O3120.3°120.0°
C4C3C2H4119.2°120.0°
C4C3O3H4119.6°119.9°
C4C3C2C164.7°75.0°
C4C3C2O2128.2°105.0°
C4C3O3H6124.4°60.1°
C3C4O4H758.1°60.1°
C3C4C5H846.0°65.0°
C2C3O3H4119.6°120.1°
C3C2C1O2167.0°180.0°
C3C2C1H1166.9°90.0°
C3C2C1H246.9°30.0°
C3C2C1H373.0°150.1°
C2C3C4H576.7°60.0°
C2C3O3H63.6°60.0°
O3C3C2C1174.9°165.0°
O3C3C2O27.9°15.0°
O3C3C4H543.4°60.1°
C2C1H1H2120.0°120.0°
C2C1H1H3120.0°119.9°
C2C1H2H3120.0°120.1°
C1C2C3H454.4°45.1°
O2C2C1H10.0°90.0°
O2C2C1H2120.0°150.0°
O2C2C1H3120.0°29.9°
O2C2C3H4112.6°135.0°
H1C1H2H3120.0°120.0°
H4C3C4H5164.0°180.0°
H4C3O3H6116.1°180.0°
H5C4O4H761.2°180.0°
H5C4C5H8164.5°55.0°
H8C5O5H960.4°180.0°
H8C5C6H10162.8°65.1°
H8C5C6H1177.3°174.9°
H10C6O6H1259.9°60.0°
H11C6O6H1260.0°60.0°

222415

PDB entries from 2024-07-10

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