TEU
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O6' | C6' | sing | 1.43Å | 1.39Å | |
C6' | C5' | sing | 1.53Å | 1.54Å | |
O4 | C4 | sing | 1.43Å | 1.34Å | |
O3 | C3 | sing | 1.43Å | 1.44Å | |
C5' | O5' | sing | 1.43Å | 1.37Å | |
C5' | C4' | sing | 1.53Å | 1.46Å | |
O4' | C4' | sing | 1.43Å | 1.38Å | |
C4 | C3 | sing | 1.53Å | 1.47Å | |
C4 | C5 | sing | 1.53Å | 1.57Å | |
C4' | C3' | sing | 1.53Å | 1.60Å | |
C3 | C2 | sing | 1.53Å | 1.47Å | |
O6 | C6 | sing | 1.43Å | 1.35Å | |
C5 | C6 | sing | 1.53Å | 1.54Å | |
C5 | O5 | sing | 1.43Å | 1.45Å | |
C3' | O3' | sing | 1.43Å | 1.50Å | |
C3' | C2' | sing | 1.51Å | 1.58Å | |
C2 | O2 | sing | 1.43Å | 1.41Å | |
C2 | C1 | sing | 1.53Å | 1.58Å | |
O5 | C1 | sing | 1.43Å | 1.45Å | |
C1' | C2' | sing | 1.51Å | 1.50Å | |
C1' | O1 | sing | 1.43Å | 1.42Å | |
C2' | O2' | doub | 1.21Å | 1.23Å | |
C1 | O1 | sing | 1.43Å | 1.47Å | |
C1' | H1A | sing | 1.09Å | 1.10Å | |
C1' | H2A | sing | 1.09Å | 1.10Å | |
C3' | H3A | sing | 1.09Å | 1.10Å | |
O3' | H4A | sing | 0.97Å | 0.95Å | |
C4' | H5A | sing | 1.09Å | 1.10Å | |
O4' | H6 | sing | 0.97Å | 0.95Å | |
C5' | H7 | sing | 1.09Å | 1.10Å | |
O5' | H8 | sing | 0.97Å | 0.95Å | |
C6' | H9 | sing | 1.09Å | 1.10Å | |
C6' | H10 | sing | 1.09Å | 1.10Å | |
O6' | H11 | sing | 0.97Å | 0.95Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
C4 | H4 | sing | 1.09Å | 1.10Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
C5 | H5 | sing | 1.09Å | 1.10Å | |
C6 | H61 | sing | 1.09Å | 1.10Å | |
C6 | H62 | sing | 1.09Å | 1.10Å | |
O6 | HO6 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O6' | C6' | C5' | 121.4° | 109.5° |
O6' | C6' | H9 | 106.4° | 109.5° |
O6' | C6' | H10 | 106.4° | 109.5° |
C6' | O6' | H11 | 109.5° | 114.0° |
C6' | C5' | O5' | 101.0° | 109.5° |
C6' | C5' | C4' | 114.8° | 109.5° |
C6' | C5' | H7 | 109.7° | 109.5° |
C5' | C6' | H9 | 106.4° | 109.5° |
C5' | C6' | H10 | 106.4° | 109.5° |
O4 | C4 | C3 | 113.4° | 109.6° |
O4 | C4 | C5 | 105.8° | 109.5° |
O4 | C4 | H4 | 109.1° | 109.6° |
C4 | O4 | HO4 | 109.5° | 114.0° |
O3 | C3 | C4 | 108.7° | 109.6° |
O3 | C3 | C2 | 107.0° | 109.5° |
O3 | C3 | H3 | 110.3° | 109.5° |
C3 | O3 | HO3 | 109.5° | 114.0° |
O5' | C5' | C4' | 108.2° | 109.4° |
O5' | C5' | H7 | 112.2° | 109.4° |
C5' | O5' | H8 | 109.5° | 114.0° |
C5' | C4' | O4' | 106.4° | 109.4° |
C5' | C4' | C3' | 119.9° | 109.5° |
C5' | C4' | H5A | 106.3° | 109.5° |
C4' | C5' | H7 | 110.7° | 109.5° |
O4' | C4' | C3' | 111.3° | 109.4° |
O4' | C4' | H5A | 107.3° | 109.4° |
C4' | O4' | H6 | 109.5° | 114.0° |
C3 | C4 | C5 | 114.6° | 109.2° |
C4 | C3 | C2 | 111.1° | 109.1° |
C4 | C3 | H3 | 109.7° | 109.5° |
C3 | C4 | H4 | 107.3° | 109.6° |
C4 | C5 | C6 | 113.1° | 109.5° |
C4 | C5 | O5 | 115.2° | 109.4° |
C5 | C4 | H4 | 106.3° | 109.5° |
C4 | C5 | H5 | 108.0° | 109.5° |
C4' | C3' | O3' | 111.5° | 109.5° |
C4' | C3' | C2' | 121.4° | 109.5° |
C4' | C3' | H3A | 104.1° | 109.4° |
C3' | C4' | H5A | 104.9° | 109.5° |
C3 | C2 | O2 | 113.0° | 109.5° |
C3 | C2 | C1 | 111.6° | 109.1° |
C3 | C2 | H2 | 106.6° | 109.6° |
C2 | C3 | H3 | 109.8° | 109.6° |
O6 | C6 | C5 | 115.5° | 109.5° |
O6 | C6 | H61 | 107.9° | 109.5° |
O6 | C6 | H62 | 107.9° | 109.5° |
C6 | O6 | HO6 | 109.5° | 113.9° |
C6 | C5 | O5 | 102.3° | 109.5° |
C6 | C5 | H5 | 108.4° | 109.5° |
C5 | C6 | H61 | 108.0° | 109.5° |
C5 | C6 | H62 | 108.0° | 109.4° |
C5 | O5 | C1 | 118.9° | 114.1° |
O5 | C5 | H5 | 109.6° | 109.5° |
O3' | C3' | C2' | 108.9° | 109.5° |
O3' | C3' | H3A | 105.1° | 109.4° |
C3' | O3' | H4A | 109.5° | 114.0° |
C3' | C2' | C1' | 115.1° | 120.0° |
C3' | C2' | O2' | 126.6° | 120.0° |
C2' | C3' | H3A | 104.3° | 109.5° |
O2 | C2 | C1 | 112.2° | 109.5° |
O2 | C2 | H2 | 107.4° | 109.5° |
C2 | O2 | HO2 | 109.5° | 114.0° |
C2 | C1 | O5 | 117.8° | 109.4° |
C2 | C1 | O1 | 110.9° | 109.5° |
C2 | C1 | H1 | 108.4° | 109.4° |
C1 | C2 | H2 | 105.5° | 109.6° |
O5 | C1 | O1 | 99.4° | 109.5° |
O5 | C1 | H1 | 110.1° | 109.5° |
C2' | C1' | O1 | 113.1° | 109.4° |
C1' | C2' | O2' | 118.2° | 120.0° |
C2' | C1' | H1A | 108.5° | 109.5° |
C2' | C1' | H2A | 108.6° | 109.4° |
C1' | O1 | C1 | 107.5° | 114.0° |
O1 | C1' | H1A | 108.5° | 109.5° |
O1 | C1' | H2A | 108.6° | 109.5° |
O1 | C1 | H1 | 109.8° | 109.5° |
H1A | C1' | H2A | 109.5° | 109.5° |
H9 | C6' | H10 | 109.5° | 109.4° |
H61 | C6 | H62 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O6' | C6' | C5' | H9 | 121.7° | 120.0° |
O6' | C6' | C5' | H10 | 121.7° | 120.0° |
O6' | C6' | C5' | O5' | 137.7° | 65.0° |
O6' | C6' | C5' | C4' | 106.2° | 175.0° |
O6' | C6' | C5' | H7 | 19.2° | 55.0° |
O6' | C6' | H9 | H10 | 114.6° | 120.0° |
C6' | C5' | O5' | C4' | 120.9° | 120.0° |
C6' | C5' | O5' | H7 | 116.7° | 120.0° |
C6' | C5' | C4' | H7 | 124.8° | 120.1° |
C6' | C5' | C4' | O4' | 54.0° | 60.0° |
C6' | C5' | C4' | C3' | 178.6° | 180.0° |
C6' | C5' | C4' | H5A | 60.2° | 59.9° |
C6' | C5' | O5' | H8 | 180.0° | 60.0° |
C5' | C6' | H9 | H10 | 114.6° | 120.0° |
C5' | C6' | O6' | H11 | 180.0° | 179.9° |
O4 | C4 | C3 | O3 | 66.4° | 63.2° |
O4 | C4 | C3 | C5 | 121.7° | 119.9° |
O4 | C4 | C3 | H4 | 120.6° | 120.2° |
O4 | C4 | C5 | H4 | 115.9° | 120.1° |
O4 | C4 | C3 | C2 | 176.1° | 176.9° |
O4 | C4 | C5 | C6 | 104.1° | 62.5° |
O4 | C4 | C5 | O5 | 138.7° | 177.5° |
O4 | C4 | C3 | H3 | 54.4° | 57.0° |
O4 | C4 | C5 | H5 | 15.8° | 57.6° |
O3 | C3 | C4 | C2 | 117.6° | 119.9° |
O3 | C3 | C4 | H3 | 120.7° | 120.2° |
O3 | C3 | C4 | C5 | 172.0° | 176.9° |
O3 | C3 | C2 | H3 | 119.8° | 120.1° |
O3 | C3 | C2 | O2 | 59.6° | 63.1° |
O3 | C3 | C2 | C1 | 172.8° | 177.0° |
O3 | C3 | C2 | H2 | 58.1° | 57.0° |
O3 | C3 | C4 | H4 | 54.2° | 57.0° |
O5' | C5' | C4' | H7 | 123.3° | 120.0° |
O5' | C5' | C4' | O4' | 165.9° | 180.0° |
O5' | C5' | C4' | C3' | 66.7° | 60.0° |
O5' | C5' | C4' | H5A | 51.7° | 60.0° |
O5' | C5' | C6' | H9 | 16.0° | 175.0° |
O5' | C5' | C6' | H10 | 100.6° | 55.0° |
C5' | C4' | O4' | C3' | 132.3° | 120.0° |
C5' | C4' | O4' | H5A | 113.5° | 120.0° |
C5' | C4' | C3' | H5A | 119.2° | 120.1° |
C5' | C4' | C3' | O3' | 157.7° | 54.9° |
C5' | C4' | C3' | C2' | 27.3° | 175.0° |
C5' | C4' | C3' | H3A | 89.6° | 65.0° |
C5' | C4' | O4' | H6 | 180.0° | 60.0° |
C4' | C5' | O5' | H8 | 59.1° | 60.0° |
C4' | C5' | C6' | H9 | 132.1° | 55.0° |
C4' | C5' | C6' | H10 | 15.5° | 65.0° |
O4' | C4' | C3' | H5A | 115.7° | 120.0° |
O4' | C4' | C3' | O3' | 77.2° | 65.0° |
O4' | C4' | C3' | C2' | 152.4° | 55.0° |
O4' | C4' | C3' | H3A | 35.5° | 175.0° |
O4' | C4' | C5' | H7 | 70.9° | 60.0° |
C3 | C4 | C5 | H4 | 118.3° | 119.9° |
C4 | C3 | C2 | H3 | 121.6° | 119.9° |
C3 | C4 | C5 | C6 | 130.1° | 177.6° |
C3 | C4 | C5 | O5 | 13.0° | 57.6° |
C4 | C3 | C2 | O2 | 178.2° | 176.9° |
C4 | C3 | C2 | C1 | 54.2° | 57.0° |
C4 | C3 | C2 | H2 | 60.5° | 62.9° |
C4 | C3 | O3 | HO3 | 180.0° | 179.6° |
C3 | C4 | O4 | HO4 | 180.0° | 60.0° |
C3 | C4 | C5 | H5 | 110.0° | 62.4° |
C5 | C4 | C3 | C2 | 54.4° | 57.0° |
C4 | C5 | C6 | O6 | 98.3° | 175.0° |
C4 | C5 | C6 | O5 | 124.5° | 119.9° |
C4 | C5 | C6 | H5 | 119.7° | 120.0° |
C4 | C5 | O5 | H5 | 122.0° | 119.9° |
C4 | C5 | O5 | C1 | 27.5° | 61.1° |
C5 | C4 | C3 | H3 | 67.3° | 62.9° |
C5 | C4 | O4 | HO4 | 53.5° | 179.7° |
C4 | C5 | C6 | H61 | 140.9° | 55.0° |
C4 | C5 | C6 | H62 | 22.6° | 64.9° |
C4' | C3' | O3' | C2' | 136.6° | 120.1° |
C4' | C3' | O3' | H3A | 112.2° | 119.9° |
C4' | C3' | C2' | H3A | 116.8° | 120.0° |
C4' | C3' | C2' | C1' | 68.7° | 75.0° |
C4' | C3' | C2' | O2' | 116.0° | 105.0° |
C4' | C3' | O3' | H4A | 180.0° | 60.1° |
C3' | C4' | O4' | H6 | 47.7° | 60.0° |
C3' | C4' | C5' | H7 | 56.5° | 59.9° |
C3 | C2 | O2 | C1 | 127.2° | 119.6° |
C3 | C2 | O2 | H2 | 117.3° | 120.2° |
C3 | C2 | C1 | H2 | 115.4° | 119.9° |
C3 | C2 | C1 | O5 | 14.9° | 57.6° |
C3 | C2 | C1 | O1 | 98.6° | 62.4° |
C3 | C2 | C1 | H1 | 140.7° | 177.6° |
C3 | C2 | O2 | HO2 | 180.0° | 179.6° |
C2 | C3 | O3 | HO3 | 59.8° | 60.0° |
C2 | C3 | C4 | H4 | 63.4° | 62.9° |
O6 | C6 | C5 | H61 | 120.9° | 120.1° |
O6 | C6 | C5 | H62 | 120.9° | 120.0° |
O6 | C6 | C5 | O5 | 137.2° | 65.0° |
O6 | C6 | C5 | H5 | 21.4° | 55.0° |
O6 | C6 | H61 | H62 | 117.2° | 120.1° |
C6 | C5 | O5 | H5 | 114.9° | 120.0° |
C6 | C5 | O5 | C1 | 95.6° | 178.9° |
C6 | C5 | C4 | H4 | 11.8° | 57.6° |
C5 | C6 | H61 | H62 | 117.3° | 119.9° |
C5 | C6 | O6 | HO6 | 180.0° | 180.0° |
C5 | O5 | C1 | C2 | 26.8° | 61.2° |
C5 | O5 | C1 | O1 | 146.5° | 58.9° |
C5 | O5 | C1 | H1 | 98.2° | 178.9° |
O5 | C5 | C4 | H4 | 105.4° | 62.4° |
O5 | C5 | C6 | H61 | 16.3° | 174.9° |
O5 | C5 | C6 | H62 | 101.9° | 55.0° |
O3' | C3' | C2' | H3A | 111.8° | 120.0° |
O3' | C3' | C2' | C1' | 62.7° | 165.0° |
O3' | C3' | C2' | O2' | 112.5° | 15.0° |
O3' | C3' | C4' | H5A | 38.5° | 175.0° |
C3' | C2' | C1' | O2' | 175.7° | 180.0° |
C3' | C2' | C1' | O1 | 153.0° | 180.0° |
C3' | C2' | C1' | H1A | 86.4° | 60.0° |
C3' | C2' | C1' | H2A | 32.5° | 60.0° |
C2' | C3' | O3' | H4A | 43.4° | 60.0° |
C2' | C3' | C4' | H5A | 91.9° | 65.0° |
O2 | C2 | C1 | H2 | 116.6° | 120.2° |
O2 | C2 | C1 | O5 | 142.9° | 177.5° |
O2 | C2 | C1 | O1 | 29.4° | 57.5° |
O2 | C2 | C1 | H1 | 91.3° | 62.5° |
O2 | C2 | C3 | H3 | 60.2° | 57.0° |
C2 | C1 | O5 | O1 | 119.7° | 120.0° |
C2 | C1 | O5 | H1 | 125.0° | 119.9° |
C2 | C1 | O1 | C1' | 65.8° | 170.0° |
C2 | C1 | O1 | H1 | 119.8° | 120.0° |
C1 | C2 | O2 | HO2 | 52.7° | 60.0° |
C1 | C2 | C3 | H3 | 67.4° | 62.9° |
O5 | C1 | O1 | C1' | 58.8° | 70.0° |
O5 | C1 | O1 | H1 | 115.5° | 120.0° |
O5 | C1 | C2 | H2 | 100.5° | 62.3° |
C1 | O5 | C5 | H5 | 149.6° | 58.8° |
C2' | C1' | O1 | H1A | 120.5° | 120.0° |
C2' | C1' | O1 | H2A | 120.6° | 119.9° |
C2' | C1' | O1 | C1 | 154.2° | 180.0° |
C2' | C1' | H1A | H2A | 118.3° | 119.9° |
C1' | C2' | C3' | H3A | 174.5° | 45.0° |
O1 | C1' | C2' | O2' | 22.6° | 0.0° |
O1 | C1' | H1A | H2A | 118.3° | 120.1° |
C1' | O1 | C1 | H1 | 174.4° | 50.0° |
O2' | C2' | C1' | H1A | 97.9° | 120.0° |
O2' | C2' | C1' | H2A | 143.2° | 120.0° |
O2' | C2' | C3' | H3A | 0.8° | 135.0° |
C1 | O1 | C1' | H1A | 33.6° | 60.0° |
C1 | O1 | C1' | H2A | 85.3° | 60.1° |
O1 | C1 | C2 | H2 | 146.0° | 177.7° |
H3A | C3' | O3' | H4A | 67.8° | 180.0° |
H3A | C3' | C4' | H5A | 151.2° | 55.1° |
H5A | C4' | O4' | H6 | 66.5° | 180.0° |
H5A | C4' | C5' | H7 | 175.0° | 180.0° |
H7 | C5' | O5' | H8 | 63.3° | 180.0° |
H7 | C5' | C6' | H9 | 102.5° | 65.0° |
H7 | C5' | C6' | H10 | 140.8° | 175.0° |
H9 | C6' | O6' | H11 | 58.3° | 59.9° |
H10 | C6' | O6' | H11 | 58.4° | 60.0° |
H1 | C1 | C2 | H2 | 25.4° | 57.6° |
H2 | C2 | O2 | HO2 | 62.7° | 60.2° |
H2 | C2 | C3 | H3 | 177.9° | 177.2° |
H3 | C3 | O3 | HO3 | 59.6° | 60.2° |
H3 | C3 | C4 | H4 | 174.9° | 177.2° |
H4 | C4 | O4 | HO4 | 60.5° | 60.3° |
H4 | C4 | C5 | H5 | 131.7° | 177.7° |
H5 | C5 | C6 | H61 | 99.4° | 65.1° |
H5 | C5 | C6 | H62 | 142.3° | 175.0° |
H61 | C6 | O6 | HO6 | 59.2° | 60.0° |
H62 | C6 | O6 | HO6 | 59.1° | 60.0° |