TEF
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.45Å | |
CA | CB | sing | 1.53Å | 1.52Å | |
CA | C | sing | 1.51Å | 1.50Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
C | OXT | sing | 1.34Å | 1.25Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
CG | CB | sing | 1.51Å | 1.51Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
N5 | N2 | sing | 1.29Å | 1.39Å | Aromatic |
N3 | N2 | sing | 1.40Å | 1.39Å | Aromatic |
N2 | CZ | sing | 1.40Å | 1.34Å | Aromatic |
O | C | doub | 1.21Å | 1.26Å | |
CD1 | CG | doub | 1.38Å | 1.39Å | Aromatic |
CD2 | CG | sing | 1.38Å | 1.39Å | Aromatic |
C7 | N3 | doub | 1.31Å | 1.36Å | Aromatic |
CE1 | CD1 | sing | 1.38Å | 1.39Å | Aromatic |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
N4 | C7 | sing | 1.33Å | 1.36Å | Aromatic |
N4 | N5 | doub | 1.29Å | 1.40Å | Aromatic |
CZ | CE1 | doub | 1.39Å | 1.39Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CZ | CE2 | sing | 1.39Å | 1.41Å | Aromatic |
C7 | H7 | sing | 1.08Å | 1.08Å | |
CE2 | CD2 | doub | 1.38Å | 1.40Å | Aromatic |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
CD2 | HD2 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | CB | 109.6° | 109.5° |
N | CA | C | 109.8° | 109.5° |
N | CA | HA | 108.9° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.4° | 111.0° |
CB | CA | C | 108.5° | 109.5° |
CB | CA | HA | 110.1° | 109.4° |
CA | CB | CG | 113.1° | 109.5° |
CA | CB | HB2 | 108.3° | 109.5° |
CA | CB | HB3 | 108.3° | 109.5° |
C | CA | HA | 109.9° | 109.4° |
CA | C | OXT | 117.6° | 120.0° |
CA | C | O | 118.7° | 120.0° |
H | N | H2 | 109.5° | 111.0° |
C | OXT | HXT | 109.5° | 117.0° |
OXT | C | O | 123.7° | 120.0° |
CG | CB | HB2 | 108.3° | 109.5° |
CG | CB | HB3 | 108.3° | 109.5° |
CB | CG | CD1 | 118.2° | 119.9° |
CB | CG | CD2 | 123.0° | 119.9° |
HB2 | CB | HB3 | 110.6° | 109.4° |
N5 | N2 | N3 | 113.4° | 107.0° |
N5 | N2 | CZ | 123.9° | 126.6° |
N2 | N5 | N4 | 102.1° | 109.5° |
N3 | N2 | CZ | 122.8° | 126.5° |
N2 | N3 | C7 | 103.8° | 106.0° |
N2 | CZ | CE1 | 121.5° | 120.0° |
N2 | CZ | CE2 | 123.0° | 120.1° |
CD1 | CG | CD2 | 118.9° | 120.1° |
CG | CD1 | CE1 | 121.0° | 120.1° |
CG | CD1 | HD1 | 119.5° | 120.0° |
CG | CD2 | CE2 | 119.0° | 120.0° |
CG | CD2 | HD2 | 120.5° | 120.0° |
N3 | C7 | N4 | 110.6° | 107.6° |
N3 | C7 | H7 | 124.7° | 126.2° |
CE1 | CD1 | HD1 | 119.5° | 119.9° |
CD1 | CE1 | CZ | 122.2° | 119.9° |
CD1 | CE1 | HE1 | 118.9° | 120.1° |
C7 | N4 | N5 | 110.1° | 109.9° |
N4 | C7 | H7 | 124.7° | 126.2° |
CZ | CE1 | HE1 | 118.9° | 120.0° |
CE1 | CZ | CE2 | 115.5° | 119.8° |
CZ | CE2 | CD2 | 123.5° | 120.0° |
CZ | CE2 | HE2 | 118.2° | 120.0° |
CD2 | CE2 | HE2 | 118.2° | 120.0° |
CE2 | CD2 | HD2 | 120.5° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | CB | C | 119.9° | 120.0° |
N | CA | CB | HA | 119.7° | 120.0° |
N | CA | C | HA | 119.7° | 120.0° |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | C | OXT | 148.0° | 160.0° |
N | CA | CB | CG | 66.5° | 65.0° |
N | CA | CB | HB2 | 53.5° | 55.0° |
N | CA | CB | HB3 | 173.5° | 175.0° |
N | CA | C | O | 31.8° | 20.0° |
CB | CA | C | HA | 120.5° | 120.0° |
CB | CA | N | H | 180.0° | 60.0° |
CB | CA | N | H2 | 60.0° | 64.0° |
CB | CA | C | OXT | 28.3° | 80.0° |
CA | CB | CG | HB2 | 120.0° | 120.0° |
CA | CB | CG | HB3 | 120.0° | 120.0° |
CA | CB | HB2 | HB3 | 118.5° | 120.0° |
CB | CA | C | O | 151.5° | 100.0° |
CA | CB | CG | CD1 | 135.3° | 90.0° |
CA | CB | CG | CD2 | 45.4° | 90.3° |
C | CA | N | H | 60.9° | 60.0° |
C | CA | N | H2 | 59.1° | 176.0° |
CA | C | OXT | O | 179.8° | 180.0° |
CA | C | OXT | HXT | 179.8° | 180.0° |
C | CA | CB | CG | 173.6° | 175.0° |
C | CA | CB | HB2 | 66.4° | 65.0° |
C | CA | CB | HB3 | 53.6° | 55.0° |
HA | CA | N | H | 59.5° | 180.0° |
HA | CA | N | H2 | 179.5° | 56.0° |
HA | CA | C | OXT | 92.3° | 40.0° |
HA | CA | CB | CG | 53.3° | 55.1° |
HA | CA | CB | HB2 | 173.3° | 175.1° |
HA | CA | CB | HB3 | 66.8° | 65.0° |
HA | CA | C | O | 88.0° | 140.0° |
HXT | OXT | C | O | 0.0° | 0.0° |
CG | CB | HB2 | HB3 | 118.5° | 120.0° |
CB | CG | CD1 | CD2 | 179.3° | 179.7° |
CB | CG | CD1 | CE1 | 179.0° | 180.0° |
CB | CG | CD1 | HD1 | 1.0° | 0.0° |
CB | CG | CD2 | CE2 | 178.9° | 179.7° |
CB | CG | CD2 | HD2 | 1.1° | 0.3° |
HB2 | CB | CG | CD1 | 15.3° | 30.0° |
HB2 | CB | CG | CD2 | 165.4° | 149.7° |
HB3 | CB | CG | CD1 | 104.7° | 150.0° |
HB3 | CB | CG | CD2 | 74.6° | 29.7° |
N5 | N2 | N3 | CZ | 178.8° | 179.7° |
N5 | N2 | N3 | C7 | 0.3° | 0.3° |
N2 | N5 | N4 | C7 | 0.1° | 0.2° |
N5 | N2 | CZ | CE1 | 1.1° | 0.3° |
N5 | N2 | CZ | CE2 | 179.3° | 179.6° |
N2 | N3 | C7 | N4 | 0.2° | 0.2° |
N3 | N2 | N5 | N4 | 0.3° | 0.3° |
N3 | N2 | CZ | CE1 | 179.7° | 180.0° |
N3 | N2 | CZ | CE2 | 0.7° | 0.0° |
N2 | N3 | C7 | H7 | 179.8° | 179.8° |
CZ | N2 | N3 | C7 | 179.1° | 180.0° |
N2 | CZ | CE1 | CD1 | 179.3° | 180.0° |
CZ | N2 | N5 | N4 | 179.0° | 180.0° |
N2 | CZ | CE1 | CE2 | 179.6° | 180.0° |
N2 | CZ | CE1 | HE1 | 0.7° | 0.0° |
N2 | CZ | CE2 | CD2 | 179.2° | 179.8° |
N2 | CZ | CE2 | HE2 | 0.8° | 0.0° |
CG | CD1 | CE1 | HD1 | 180.0° | 180.0° |
CG | CD1 | CE1 | CZ | 0.3° | 0.1° |
CG | CD1 | CE1 | HE1 | 179.7° | 180.0° |
CD1 | CG | CD2 | CE2 | 0.4° | 0.6° |
CD1 | CG | CD2 | HD2 | 179.6° | 179.9° |
CD2 | CG | CD1 | CE1 | 0.4° | 0.3° |
CD2 | CG | CD1 | HD1 | 179.7° | 179.7° |
CG | CD2 | CE2 | CZ | 0.4° | 0.5° |
CG | CD2 | CE2 | HD2 | 180.0° | 179.5° |
CG | CD2 | CE2 | HE2 | 179.6° | 179.7° |
N3 | C7 | N4 | H7 | 180.0° | 180.0° |
N3 | C7 | N4 | N5 | 0.1° | 0.0° |
CD1 | CE1 | CZ | HE1 | 180.0° | 180.0° |
CD1 | CE1 | CZ | CE2 | 0.3° | 0.0° |
HD1 | CD1 | CE1 | CZ | 179.7° | 180.0° |
HD1 | CD1 | CE1 | HE1 | 0.3° | 0.0° |
N5 | N4 | C7 | H7 | 179.9° | 180.0° |
CE1 | CZ | CE2 | CD2 | 0.4° | 0.3° |
CE1 | CZ | CE2 | HE2 | 179.6° | 180.0° |
HE1 | CE1 | CZ | CE2 | 179.7° | 180.0° |
CZ | CE2 | CD2 | HE2 | 180.0° | 179.7° |
CZ | CE2 | CD2 | HD2 | 179.6° | 180.0° |
HE2 | CE2 | CD2 | HD2 | 0.4° | 0.2° |