Obsolete: TDG
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3' | C3' | sing | 1.43Å | 1.43Å | |
| C3' | C4' | sing | 1.53Å | 1.52Å | |
| C3' | C2' | sing | 1.53Å | 1.52Å | |
| C4' | C5' | sing | 1.53Å | 1.53Å | |
| C4' | O4' | sing | 1.43Å | 1.43Å | |
| O2' | C2' | sing | 1.43Å | 1.43Å | |
| O6' | C6' | sing | 1.43Å | 1.43Å | |
| C2' | C1' | sing | 1.53Å | 1.52Å | |
| C5' | C6' | sing | 1.53Å | 1.53Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| O6 | C6 | sing | 1.43Å | 1.43Å | |
| C1' | O5' | sing | 1.43Å | 1.43Å | |
| C1' | S1 | sing | 1.81Å | 1.76Å | |
| C6 | C5 | sing | 1.53Å | 1.53Å | |
| O5 | C5 | sing | 1.43Å | 1.43Å | |
| O5 | C1 | sing | 1.43Å | 1.42Å | |
| S1 | C1 | sing | 1.81Å | 1.76Å | |
| C5 | C4 | sing | 1.53Å | 1.54Å | |
| C1 | C2 | sing | 1.53Å | 1.52Å | |
| C4 | O4 | sing | 1.43Å | 1.43Å | |
| C4 | C3 | sing | 1.53Å | 1.52Å | |
| C2 | O2 | sing | 1.43Å | 1.43Å | |
| C2 | C3 | sing | 1.53Å | 1.51Å | |
| C3 | O3 | sing | 1.43Å | 1.43Å | |
| C1 | H1 | sing | 1.09Å | 1.10Å | |
| C2 | H2 | sing | 1.09Å | 1.10Å | |
| O2 | HO2 | sing | 0.97Å | 0.95Å | |
| C3 | H3 | sing | 1.09Å | 1.10Å | |
| O3 | HO3 | sing | 0.97Å | 0.95Å | |
| C4 | H4 | sing | 1.09Å | 1.10Å | |
| O4 | HO4 | sing | 0.97Å | 0.95Å | |
| C5 | H5 | sing | 1.09Å | 1.10Å | |
| C6 | H62 | sing | 1.09Å | 1.10Å | |
| C6 | H61 | sing | 1.09Å | 1.10Å | |
| O6 | HO6 | sing | 0.97Å | 0.95Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| O4' | HO4' | sing | 0.97Å | 0.95Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C6' | H6'2 | sing | 1.09Å | 1.10Å | |
| C6' | H6'1 | sing | 1.09Å | 1.10Å | |
| O6' | HO6' | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3' | C3' | C4' | 109.8° | 109.5° |
| O3' | C3' | C2' | 109.9° | 109.6° |
| O3' | C3' | H3' | 109.9° | 109.6° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C4' | C3' | C2' | 109.8° | 109.0° |
| C3' | C4' | C5' | 111.7° | 109.1° |
| C3' | C4' | O4' | 109.3° | 109.5° |
| C4' | C3' | H3' | 108.7° | 109.5° |
| C3' | C4' | H4' | 108.5° | 109.5° |
| C3' | C2' | O2' | 110.5° | 109.6° |
| C3' | C2' | C1' | 109.3° | 109.2° |
| C3' | C2' | H2' | 108.5° | 109.5° |
| C2' | C3' | H3' | 108.7° | 109.5° |
| C5' | C4' | O4' | 109.2° | 109.5° |
| C4' | C5' | C6' | 111.8° | 109.5° |
| C4' | C5' | O5' | 111.0° | 109.4° |
| C5' | C4' | H4' | 108.5° | 109.5° |
| C4' | C5' | H5' | 108.3° | 109.5° |
| O4' | C4' | H4' | 109.7° | 109.6° |
| C4' | O4' | HO4' | 109.5° | 114.0° |
| O2' | C2' | C1' | 110.5° | 109.5° |
| O2' | C2' | H2' | 109.6° | 109.5° |
| C2' | O2' | HO2' | 109.5° | 114.0° |
| O6' | C6' | C5' | 110.3° | 109.5° |
| O6' | C6' | H6'2 | 109.3° | 109.4° |
| O6' | C6' | H6'1 | 109.3° | 109.5° |
| C6' | O6' | HO6' | 109.5° | 114.0° |
| C2' | C1' | O5' | 112.1° | 109.4° |
| C2' | C1' | S1 | 107.2° | 109.5° |
| C2' | C1' | H1' | 110.5° | 109.5° |
| C1' | C2' | H2' | 108.5° | 109.5° |
| C6' | C5' | O5' | 107.8° | 109.5° |
| C6' | C5' | H5' | 108.3° | 109.5° |
| C5' | C6' | H6'2 | 109.3° | 109.5° |
| C5' | C6' | H6'1 | 109.3° | 109.5° |
| C5' | O5' | C1' | 116.4° | 114.1° |
| O5' | C5' | H5' | 109.6° | 109.5° |
| O6 | C6 | C5 | 110.2° | 109.5° |
| O6 | C6 | H62 | 109.3° | 109.5° |
| O6 | C6 | H61 | 109.3° | 109.5° |
| C6 | O6 | HO6 | 109.5° | 114.0° |
| O5' | C1' | S1 | 107.4° | 109.4° |
| O5' | C1' | H1' | 111.9° | 109.4° |
| C1' | S1 | C1 | 107.6° | 103.0° |
| S1 | C1' | H1' | 107.6° | 109.5° |
| C6 | C5 | O5 | 109.5° | 109.5° |
| C6 | C5 | C4 | 115.1° | 109.5° |
| C6 | C5 | H5 | 106.7° | 109.5° |
| C5 | C6 | H62 | 109.3° | 109.4° |
| C5 | C6 | H61 | 109.3° | 109.5° |
| C5 | O5 | C1 | 111.2° | 114.1° |
| O5 | C5 | C4 | 110.6° | 109.4° |
| O5 | C5 | H5 | 107.9° | 109.5° |
| O5 | C1 | S1 | 110.0° | 109.5° |
| O5 | C1 | C2 | 111.6° | 109.4° |
| O5 | C1 | H1 | 111.7° | 109.5° |
| S1 | C1 | C2 | 105.4° | 109.5° |
| S1 | C1 | H1 | 107.5° | 109.5° |
| C5 | C4 | O4 | 111.8° | 109.5° |
| C5 | C4 | C3 | 112.4° | 109.2° |
| C5 | C4 | H4 | 108.5° | 109.6° |
| C4 | C5 | H5 | 106.6° | 109.4° |
| C1 | C2 | O2 | 109.3° | 109.5° |
| C1 | C2 | C3 | 112.0° | 109.2° |
| C2 | C1 | H1 | 110.4° | 109.5° |
| C1 | C2 | H2 | 108.2° | 109.5° |
| O4 | C4 | C3 | 105.4° | 109.5° |
| O4 | C4 | H4 | 110.0° | 109.5° |
| C4 | O4 | HO4 | 109.5° | 114.0° |
| C4 | C3 | C2 | 108.9° | 109.0° |
| C4 | C3 | O3 | 111.7° | 109.6° |
| C4 | C3 | H3 | 109.8° | 109.6° |
| C3 | C4 | H4 | 108.7° | 109.5° |
| O2 | C2 | C3 | 109.8° | 109.5° |
| O2 | C2 | H2 | 109.2° | 109.5° |
| C2 | O2 | HO2 | 109.5° | 114.1° |
| C2 | C3 | O3 | 105.4° | 109.6° |
| C3 | C2 | H2 | 108.2° | 109.6° |
| C2 | C3 | H3 | 109.9° | 109.6° |
| O3 | C3 | H3 | 111.1° | 109.5° |
| C3 | O3 | HO3 | 109.5° | 114.0° |
| H62 | C6 | H61 | 109.5° | 109.5° |
| H6'2 | C6' | H6'1 | 109.5° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3' | C3' | C4' | C2' | 120.9° | 119.9° |
| O3' | C3' | C4' | H3' | 120.2° | 120.3° |
| O3' | C3' | C2' | H3' | 120.3° | 120.3° |
| O3' | C3' | C4' | C5' | 175.7° | 176.9° |
| O3' | C3' | C4' | O4' | 54.8° | 57.0° |
| O3' | C3' | C2' | O2' | 61.6° | 63.2° |
| O3' | C3' | C2' | C1' | 176.7° | 176.9° |
| O3' | C3' | C2' | H2' | 58.6° | 56.9° |
| O3' | C3' | C4' | H4' | 64.8° | 63.2° |
| C4' | C3' | C2' | H3' | 118.8° | 119.9° |
| C3' | C4' | C5' | O4' | 121.0° | 119.9° |
| C3' | C4' | C5' | H4' | 119.5° | 119.9° |
| C3' | C4' | O4' | H4' | 118.8° | 120.1° |
| C4' | C3' | C2' | O2' | 177.5° | 176.9° |
| C4' | C3' | C2' | C1' | 55.8° | 57.0° |
| C3' | C4' | C5' | C6' | 171.7° | 177.6° |
| C3' | C4' | C5' | O5' | 51.3° | 57.6° |
| C4' | C3' | C2' | H2' | 62.3° | 62.9° |
| C4' | C3' | O3' | HO3' | 180.0° | 180.0° |
| C3' | C4' | O4' | HO4' | 180.0° | 60.0° |
| C3' | C4' | C5' | H5' | 69.1° | 62.4° |
| C2' | C3' | C4' | C5' | 54.8° | 57.0° |
| C2' | C3' | C4' | O4' | 66.2° | 62.9° |
| C3' | C2' | O2' | C1' | 121.0° | 119.7° |
| C3' | C2' | O2' | H2' | 119.5° | 120.1° |
| C3' | C2' | C1' | H2' | 118.1° | 119.9° |
| C3' | C2' | C1' | O5' | 55.3° | 57.6° |
| C3' | C2' | C1' | S1 | 172.9° | 177.6° |
| C3' | C2' | C1' | H1' | 70.2° | 62.4° |
| C3' | C2' | O2' | HO2' | 180.0° | 179.7° |
| C2' | C3' | O3' | HO3' | 59.1° | 60.5° |
| C2' | C3' | C4' | H4' | 174.3° | 176.9° |
| C5' | C4' | O4' | H4' | 118.7° | 120.2° |
| C4' | C5' | C6' | O6' | 74.2° | 175.0° |
| C4' | C5' | C6' | O5' | 122.3° | 119.9° |
| C4' | C5' | C6' | H5' | 119.2° | 120.0° |
| C4' | C5' | O5' | H5' | 119.6° | 120.0° |
| C4' | C5' | O5' | C1' | 52.0° | 61.1° |
| C5' | C4' | C3' | H3' | 64.1° | 62.9° |
| C5' | C4' | O4' | HO4' | 57.6° | 179.7° |
| C4' | C5' | C6' | H6'2 | 165.7° | 55.0° |
| C4' | C5' | C6' | H6'1 | 45.9° | 64.9° |
| O4' | C4' | C5' | C6' | 50.7° | 57.7° |
| O4' | C4' | C5' | O5' | 69.7° | 62.3° |
| O4' | C4' | C3' | H3' | 175.0° | 177.2° |
| O4' | C4' | C5' | H5' | 169.9° | 177.7° |
| O2' | C2' | C1' | H2' | 120.2° | 120.2° |
| O2' | C2' | C1' | O5' | 177.0° | 177.6° |
| O2' | C2' | C1' | S1 | 65.4° | 62.5° |
| O2' | C2' | C1' | H1' | 51.6° | 57.6° |
| O2' | C2' | C3' | H3' | 58.7° | 57.1° |
| O6' | C6' | C5' | H6'2 | 120.1° | 120.0° |
| O6' | C6' | C5' | H6'1 | 120.1° | 120.1° |
| O6' | C6' | C5' | O5' | 163.5° | 65.1° |
| O6' | C6' | C5' | H5' | 45.0° | 55.0° |
| O6' | C6' | H6'2 | H6'1 | 119.6° | 119.9° |
| C2' | C1' | O5' | C5' | 55.0° | 61.1° |
| C2' | C1' | O5' | S1 | 117.5° | 120.0° |
| C2' | C1' | O5' | H1' | 124.7° | 120.0° |
| C2' | C1' | S1 | H1' | 118.8° | 120.1° |
| C2' | C1' | S1 | C1 | 164.2° | 175.1° |
| C1' | C2' | O2' | HO2' | 59.0° | 60.0° |
| C1' | C2' | C3' | H3' | 63.0° | 62.9° |
| C6' | C5' | O5' | H5' | 117.6° | 120.0° |
| C6' | C5' | O5' | C1' | 174.8° | 178.9° |
| C6' | C5' | C4' | H4' | 68.8° | 62.6° |
| C5' | C6' | H6'2 | H6'1 | 119.7° | 120.0° |
| C5' | C6' | O6' | HO6' | 180.0° | 180.0° |
| C5' | O5' | C1' | S1 | 172.5° | 178.9° |
| C5' | O5' | C1' | H1' | 69.7° | 58.9° |
| O5' | C5' | C4' | H4' | 170.8° | 177.5° |
| O5' | C5' | C6' | H6'2 | 43.4° | 174.9° |
| O5' | C5' | C6' | H6'1 | 76.4° | 55.0° |
| O6 | C6 | C5 | H62 | 120.1° | 120.0° |
| O6 | C6 | C5 | H61 | 120.1° | 120.0° |
| O6 | C6 | C5 | O5 | 37.6° | 65.0° |
| O6 | C6 | C5 | C4 | 163.0° | 175.0° |
| O6 | C6 | C5 | H5 | 78.9° | 55.0° |
| O6 | C6 | H62 | H61 | 119.7° | 120.0° |
| O5' | C1' | S1 | H1' | 120.6° | 120.0° |
| O5' | C1' | S1 | C1 | 75.2° | 65.0° |
| O5' | C1' | C2' | H2' | 62.8° | 62.3° |
| C1' | O5' | C5' | H5' | 67.5° | 58.9° |
| C1' | S1 | C1 | O5 | 97.6° | 65.0° |
| C1' | S1 | C1 | C2 | 142.0° | 175.0° |
| C1' | S1 | C1 | H1 | 24.3° | 55.0° |
| S1 | C1' | C2' | H2' | 54.8° | 57.7° |
| C6 | C5 | O5 | C4 | 127.9° | 120.1° |
| C6 | C5 | O5 | H5 | 115.8° | 120.0° |
| C6 | C5 | O5 | C1 | 172.1° | 178.8° |
| C6 | C5 | C4 | H5 | 118.1° | 120.0° |
| C6 | C5 | C4 | O4 | 61.9° | 57.7° |
| C6 | C5 | C4 | C3 | 179.9° | 177.6° |
| C6 | C5 | C4 | H4 | 59.6° | 62.4° |
| C5 | C6 | H62 | H61 | 119.7° | 120.0° |
| C5 | C6 | O6 | HO6 | 180.0° | 180.0° |
| C5 | O5 | C1 | S1 | 177.8° | 178.9° |
| O5 | C5 | C4 | H5 | 117.1° | 119.9° |
| C5 | O5 | C1 | C2 | 61.2° | 61.1° |
| O5 | C5 | C4 | O4 | 63.0° | 62.3° |
| O5 | C5 | C4 | C3 | 55.3° | 57.5° |
| C5 | O5 | C1 | H1 | 62.9° | 58.8° |
| O5 | C5 | C4 | H4 | 175.6° | 177.6° |
| O5 | C5 | C6 | H62 | 82.5° | 175.0° |
| O5 | C5 | C6 | H61 | 157.7° | 55.0° |
| O5 | C1 | S1 | C2 | 120.4° | 119.9° |
| O5 | C1 | S1 | H1 | 121.9° | 120.1° |
| C1 | O5 | C5 | C4 | 60.0° | 61.1° |
| O5 | C1 | C2 | H1 | 124.9° | 119.9° |
| O5 | C1 | C2 | O2 | 178.7° | 177.5° |
| O5 | C1 | C2 | C3 | 56.8° | 57.6° |
| O5 | C1 | C2 | H2 | 62.4° | 62.4° |
| C1 | O5 | C5 | H5 | 56.3° | 58.8° |
| S1 | C1 | C2 | H1 | 115.8° | 120.0° |
| S1 | C1 | C2 | O2 | 61.9° | 62.5° |
| S1 | C1 | C2 | C3 | 176.2° | 177.6° |
| S1 | C1 | C2 | H2 | 56.9° | 57.6° |
| C1 | S1 | C1' | H1' | 45.4° | 55.0° |
| C5 | C4 | O4 | C3 | 122.4° | 119.7° |
| C5 | C4 | O4 | H4 | 120.6° | 120.2° |
| C5 | C4 | C3 | H4 | 120.2° | 120.1° |
| C5 | C4 | C3 | C2 | 49.9° | 56.9° |
| C5 | C4 | C3 | O3 | 165.9° | 176.8° |
| C5 | C4 | C3 | H3 | 70.5° | 63.0° |
| C5 | C4 | O4 | HO4 | 180.0° | 179.7° |
| C4 | C5 | C6 | H62 | 42.9° | 54.9° |
| C4 | C5 | C6 | H61 | 76.9° | 65.0° |
| C1 | C2 | C3 | C4 | 50.3° | 57.0° |
| C1 | C2 | O2 | C3 | 123.2° | 119.7° |
| C1 | C2 | O2 | H2 | 118.2° | 120.1° |
| C1 | C2 | C3 | H2 | 119.2° | 120.0° |
| C1 | C2 | C3 | O3 | 170.3° | 176.9° |
| C1 | C2 | O2 | HO2 | 180.0° | 59.9° |
| C1 | C2 | C3 | H3 | 70.0° | 62.9° |
| O4 | C4 | C3 | H4 | 117.9° | 120.1° |
| O4 | C4 | C3 | C2 | 72.1° | 63.0° |
| O4 | C4 | C3 | O3 | 43.9° | 56.9° |
| O4 | C4 | C3 | H3 | 167.6° | 177.2° |
| O4 | C4 | C5 | H5 | 179.9° | 177.7° |
| C4 | C3 | C2 | O2 | 171.9° | 176.8° |
| C4 | C3 | C2 | O3 | 120.0° | 119.9° |
| C4 | C3 | C2 | H3 | 120.3° | 119.9° |
| C4 | C3 | O3 | H3 | 122.9° | 120.2° |
| C4 | C3 | C2 | H2 | 68.9° | 63.0° |
| C4 | C3 | O3 | HO3 | 180.0° | 179.5° |
| C3 | C4 | O4 | HO4 | 57.7° | 60.0° |
| C3 | C4 | C5 | H5 | 61.8° | 62.4° |
| O2 | C2 | C3 | H2 | 119.2° | 120.1° |
| O2 | C2 | C3 | O3 | 68.1° | 63.2° |
| O2 | C2 | C1 | H1 | 53.8° | 57.6° |
| O2 | C2 | C3 | H3 | 51.6° | 57.0° |
| C2 | C3 | O3 | H3 | 119.0° | 120.2° |
| C3 | C2 | C1 | H1 | 68.1° | 62.4° |
| C3 | C2 | O2 | HO2 | 56.8° | 179.7° |
| C2 | C3 | O3 | HO3 | 61.9° | 60.0° |
| C2 | C3 | C4 | H4 | 170.1° | 177.0° |
| O3 | C3 | C2 | H2 | 51.1° | 56.9° |
| O3 | C3 | C4 | H4 | 74.0° | 63.1° |
| H1 | C1 | C2 | H2 | 172.7° | 177.6° |
| H2 | C2 | O2 | HO2 | 61.8° | 60.1° |
| H2 | C2 | C3 | H3 | 170.8° | 177.1° |
| H3 | C3 | O3 | HO3 | 57.0° | 60.2° |
| H3 | C3 | C4 | H4 | 49.7° | 57.1° |
| H4 | C4 | O4 | HO4 | 59.4° | 60.1° |
| H4 | C4 | C5 | H5 | 58.5° | 57.6° |
| H5 | C5 | C6 | H62 | 160.9° | 65.0° |
| H5 | C5 | C6 | H61 | 41.2° | 175.0° |
| H62 | C6 | O6 | HO6 | 59.9° | 60.0° |
| H61 | C6 | O6 | HO6 | 59.9° | 60.0° |
| H1' | C1' | C2' | H2' | 171.7° | 177.8° |
| H2' | C2' | O2' | HO2' | 60.5° | 60.2° |
| H2' | C2' | C3' | H3' | 178.9° | 177.2° |
| H3' | C3' | O3' | HO3' | 60.5° | 59.8° |
| H3' | C3' | C4' | H4' | 55.4° | 57.0° |
| H4' | C4' | O4' | HO4' | 61.2° | 60.1° |
| H4' | C4' | C5' | H5' | 50.4° | 57.4° |
| H5' | C5' | C6' | H6'2 | 75.1° | 65.0° |
| H5' | C5' | C6' | H6'1 | 165.1° | 175.0° |
| H6'2 | C6' | O6' | HO6' | 59.9° | 60.0° |
| H6'1 | C6' | O6' | HO6' | 59.9° | 59.9° |
