TCP
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| CP | O5' | sing | 1.43Å | 1.41Å | |
| CP | HP1 | sing | 1.09Å | 1.09Å | |
| CP | HP2 | sing | 1.09Å | 1.09Å | |
| CP | HP3 | sing | 1.09Å | 1.11Å | |
| O5' | C5' | sing | 1.43Å | 1.41Å | |
| C5' | C4' | sing | 1.53Å | 1.53Å | |
| C5' | H5' | sing | 1.09Å | 1.09Å | |
| C5' | H5'' | sing | 1.09Å | 1.09Å | |
| C4' | O4' | sing | 1.44Å | 1.41Å | |
| C4' | C3' | sing | 1.55Å | 1.53Å | |
| C4' | H4' | sing | 1.09Å | 1.09Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| C3' | O3' | sing | 1.43Å | 1.41Å | |
| C3' | C2' | sing | 1.55Å | 1.53Å | |
| C3' | H3' | sing | 1.09Å | 1.09Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | C1' | sing | 1.54Å | 1.53Å | |
| C2' | H2' | sing | 1.09Å | 1.09Å | |
| C2' | H2'' | sing | 1.09Å | 1.09Å | |
| C1' | N1 | sing | 1.46Å | 1.48Å | |
| C1' | H1' | sing | 1.09Å | 1.09Å | |
| N1 | C2 | sing | 1.34Å | 1.38Å | |
| N1 | C6 | sing | 1.37Å | 1.36Å | |
| C2 | O2 | doub | 1.22Å | 1.23Å | |
| C2 | N3 | sing | 1.35Å | 1.39Å | |
| N3 | C4 | sing | 1.35Å | 1.39Å | |
| N3 | HN3 | sing | 0.97Å | 1.01Å | |
| C4 | O4 | doub | 1.22Å | 1.23Å | |
| C4 | C5 | sing | 1.42Å | 1.44Å | |
| C5 | C5M | sing | 1.51Å | 1.51Å | |
| C5 | C6 | doub | 1.35Å | 1.35Å | |
| C5M | H71 | sing | 1.09Å | 1.09Å | |
| C5M | H72 | sing | 1.09Å | 1.09Å | |
| C5M | H73 | sing | 1.09Å | 1.09Å | |
| C6 | H6 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O5' | CP | HP1 | 109.8° | 109.5° |
| O5' | CP | HP2 | 108.6° | 109.5° |
| O5' | CP | HP3 | 110.0° | 109.4° |
| CP | O5' | C5' | 115.7° | 106.8° |
| HP1 | CP | HP2 | 108.0° | 109.5° |
| HP1 | CP | HP3 | 3.3° | 109.5° |
| HP2 | CP | HP3 | 105.0° | 109.4° |
| O5' | C5' | C4' | 111.4° | 109.5° |
| O5' | C5' | H5' | 109.8° | 109.5° |
| O5' | C5' | H5'' | 110.9° | 109.4° |
| C4' | C5' | H5' | 110.6° | 109.4° |
| C4' | C5' | H5'' | 106.0° | 109.5° |
| C5' | C4' | O4' | 109.3° | 110.7° |
| C5' | C4' | C3' | 112.6° | 110.7° |
| C5' | C4' | H4' | 110.1° | 110.5° |
| H5' | C5' | H5'' | 108.1° | 109.5° |
| O4' | C4' | C3' | 106.7° | 103.6° |
| O4' | C4' | H4' | 108.0° | 110.6° |
| C4' | O4' | C1' | 107.8° | 107.0° |
| C3' | C4' | H4' | 109.9° | 110.6° |
| C4' | C3' | O3' | 109.7° | 111.2° |
| C4' | C3' | C2' | 102.6° | 102.1° |
| C4' | C3' | H3' | 109.7° | 110.7° |
| O4' | C1' | C2' | 104.9° | 107.3° |
| O4' | C1' | N1 | 110.8° | 109.9° |
| O4' | C1' | H1' | 106.3° | 109.8° |
| O3' | C3' | C2' | 114.9° | 110.9° |
| O3' | C3' | H3' | 110.5° | 110.8° |
| C3' | O3' | HO3' | 109.6° | 106.9° |
| C2' | C3' | H3' | 109.1° | 110.9° |
| C3' | C2' | C1' | 106.0° | 104.2° |
| C3' | C2' | H2' | 108.9° | 110.3° |
| C3' | C2' | H2'' | 113.4° | 110.7° |
| C1' | C2' | H2' | 112.0° | 110.5° |
| C1' | C2' | H2'' | 107.6° | 110.5° |
| C2' | C1' | N1 | 112.5° | 110.0° |
| C2' | C1' | H1' | 109.3° | 109.9° |
| H2' | C2' | H2'' | 109.1° | 110.5° |
| N1 | C1' | H1' | 112.5° | 109.9° |
| C1' | N1 | C2 | 119.4° | 119.7° |
| C1' | N1 | C6 | 119.8° | 119.7° |
| C2 | N1 | C6 | 120.8° | 120.6° |
| N1 | C2 | O2 | 123.3° | 119.5° |
| N1 | C2 | N3 | 116.5° | 120.9° |
| N1 | C6 | C5 | 122.3° | 119.7° |
| N1 | C6 | H6 | 118.6° | 120.2° |
| O2 | C2 | N3 | 120.1° | 119.5° |
| C2 | N3 | C4 | 125.2° | 120.3° |
| C2 | N3 | HN3 | 117.5° | 119.8° |
| C4 | N3 | HN3 | 117.3° | 119.9° |
| N3 | C4 | O4 | 120.6° | 120.4° |
| N3 | C4 | C5 | 114.6° | 119.4° |
| O4 | C4 | C5 | 124.9° | 120.3° |
| C4 | C5 | C5M | 119.3° | 120.4° |
| C4 | C5 | C6 | 120.3° | 119.1° |
| C5M | C5 | C6 | 120.3° | 120.4° |
| C5 | C5M | H71 | 111.7° | 109.4° |
| C5 | C5M | H72 | 108.9° | 109.5° |
| C5 | C5M | H73 | 110.5° | 109.5° |
| C5 | C6 | H6 | 119.1° | 120.1° |
| H71 | C5M | H72 | 108.6° | 109.5° |
| H71 | C5M | H73 | 108.3° | 109.5° |
| H72 | C5M | H73 | 108.7° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O5' | CP | HP1 | HP2 | 118.3° | 120.1° |
| O5' | CP | HP1 | HP3 | 94.1° | 120.0° |
| O5' | CP | HP2 | HP3 | 117.6° | 119.9° |
| CP | O5' | C5' | C4' | 158.6° | 179.9° |
| CP | O5' | C5' | H5' | 78.6° | 59.9° |
| CP | O5' | C5' | H5'' | 40.8° | 60.1° |
| HP1 | CP | HP2 | HP3 | 1.4° | 120.1° |
| HP1 | CP | O5' | C5' | 51.2° | 59.9° |
| HP2 | CP | O5' | C5' | 169.1° | 180.0° |
| HP3 | CP | O5' | C5' | 54.7° | 60.1° |
| O5' | C5' | C4' | H5' | 122.4° | 120.0° |
| O5' | C5' | C4' | H5'' | 120.7° | 120.0° |
| O5' | C5' | H5' | H5'' | 121.1° | 120.0° |
| O5' | C5' | C4' | O4' | 43.2° | 63.6° |
| O5' | C5' | C4' | C3' | 75.2° | 177.9° |
| O5' | C5' | C4' | H4' | 161.7° | 59.3° |
| C4' | C5' | H5' | H5'' | 115.6° | 120.0° |
| C5' | C4' | O4' | C3' | 122.0° | 118.6° |
| C5' | C4' | O4' | H4' | 119.8° | 122.8° |
| C5' | C4' | C3' | H4' | 123.2° | 122.8° |
| C5' | C4' | O4' | C1' | 157.3° | 158.6° |
| C5' | C4' | C3' | O3' | 96.3° | 86.3° |
| C5' | C4' | C3' | C2' | 141.2° | 155.4° |
| C5' | C4' | C3' | H3' | 25.3° | 37.4° |
| H5' | C5' | C4' | O4' | 165.6° | 56.4° |
| H5' | C5' | C4' | C3' | 47.2° | 57.9° |
| H5' | C5' | C4' | H4' | 75.9° | 179.4° |
| H5'' | C5' | C4' | O4' | 77.5° | 176.4° |
| H5'' | C5' | C4' | C3' | 164.1° | 62.1° |
| H5'' | C5' | C4' | H4' | 41.0° | 60.6° |
| O4' | C4' | C3' | H4' | 116.9° | 118.6° |
| O4' | C4' | C3' | O3' | 143.8° | 155.1° |
| O4' | C4' | C3' | C2' | 21.3° | 36.7° |
| O4' | C4' | C3' | H3' | 94.6° | 81.3° |
| C4' | O4' | C1' | C2' | 33.7° | 26.5° |
| C4' | O4' | C1' | N1 | 155.4° | 146.1° |
| C4' | O4' | C1' | H1' | 82.1° | 92.9° |
| C3' | C4' | O4' | C1' | 35.3° | 39.9° |
| C4' | C3' | O3' | C2' | 114.9° | 112.9° |
| C4' | C3' | O3' | H3' | 121.1° | 123.6° |
| C4' | C3' | C2' | H3' | 116.3° | 117.9° |
| C4' | C3' | O3' | HO3' | 179.9° | 174.3° |
| C4' | C3' | C2' | C1' | 1.3° | 20.6° |
| C4' | C3' | C2' | H2' | 121.9° | 98.0° |
| C4' | C3' | C2' | H2'' | 116.5° | 139.4° |
| H4' | C4' | O4' | C1' | 82.9° | 78.6° |
| H4' | C4' | C3' | O3' | 26.9° | 36.5° |
| H4' | C4' | C3' | C2' | 95.6° | 81.8° |
| H4' | C4' | C3' | H3' | 148.5° | 160.1° |
| O4' | C1' | C2' | C3' | 19.0° | 2.2° |
| O4' | C1' | C2' | N1 | 120.6° | 119.5° |
| O4' | C1' | C2' | H1' | 113.7° | 119.4° |
| O4' | C1' | C2' | H2' | 99.6° | 120.7° |
| O4' | C1' | C2' | H2'' | 140.6° | 116.7° |
| O4' | C1' | N1 | H1' | 118.9° | 121.0° |
| O4' | C1' | N1 | C2 | 138.0° | 58.3° |
| O4' | C1' | N1 | C6 | 44.5° | 121.5° |
| O3' | C3' | C2' | H3' | 124.8° | 123.5° |
| O3' | C3' | C2' | C1' | 120.2° | 139.2° |
| O3' | C3' | C2' | H2' | 119.2° | 20.6° |
| O3' | C3' | C2' | H2'' | 2.4° | 102.1° |
| C2' | C3' | O3' | HO3' | 65.1° | 61.4° |
| C3' | C2' | C1' | H2' | 118.6° | 118.5° |
| C3' | C2' | C1' | H2'' | 121.6° | 118.9° |
| C3' | C2' | H2' | H2'' | 124.2° | 122.7° |
| C3' | C2' | C1' | N1 | 139.5° | 121.7° |
| C3' | C2' | C1' | H1' | 94.7° | 117.2° |
| H3' | C3' | O3' | HO3' | 59.0° | 62.1° |
| H3' | C3' | C2' | C1' | 115.0° | 97.3° |
| H3' | C3' | C2' | H2' | 5.6° | 144.0° |
| H3' | C3' | C2' | H2'' | 127.2° | 21.4° |
| C1' | C2' | H2' | H2'' | 118.9° | 122.6° |
| C2' | C1' | N1 | H1' | 124.0° | 121.2° |
| C2' | C1' | N1 | C2 | 104.9° | 59.5° |
| C2' | C1' | N1 | C6 | 72.6° | 120.6° |
| H2' | C2' | C1' | N1 | 20.9° | 119.8° |
| H2' | C2' | C1' | H1' | 146.7° | 1.3° |
| H2'' | C2' | C1' | N1 | 98.9° | 2.8° |
| H2'' | C2' | C1' | H1' | 26.9° | 123.9° |
| C1' | N1 | C2 | C6 | 177.5° | 179.8° |
| C1' | N1 | C2 | O2 | 4.0° | 0.2° |
| C1' | N1 | C2 | N3 | 176.6° | 179.7° |
| C1' | N1 | C6 | C5 | 177.2° | 179.9° |
| C1' | N1 | C6 | H6 | 2.7° | 0.0° |
| H1' | C1' | N1 | C2 | 19.1° | 179.3° |
| H1' | C1' | N1 | C6 | 163.3° | 0.5° |
| N1 | C2 | O2 | N3 | 179.4° | 179.6° |
| N1 | C2 | N3 | C4 | 1.6° | 0.4° |
| N1 | C2 | N3 | HN3 | 179.2° | 179.8° |
| C2 | N1 | C6 | C5 | 5.2° | 0.3° |
| C2 | N1 | C6 | H6 | 174.8° | 179.9° |
| C6 | N1 | C2 | O2 | 173.5° | 180.0° |
| C6 | N1 | C2 | N3 | 5.9° | 0.4° |
| N1 | C6 | C5 | C4 | 0.1° | 0.1° |
| N1 | C6 | C5 | C5M | 176.4° | 180.0° |
| N1 | C6 | C5 | H6 | 180.0° | 179.9° |
| O2 | C2 | N3 | C4 | 177.8° | 180.0° |
| O2 | C2 | N3 | HN3 | 0.2° | 0.2° |
| C2 | N3 | C4 | HN3 | 177.6° | 179.8° |
| C2 | N3 | C4 | O4 | 177.4° | 179.8° |
| C2 | N3 | C4 | C5 | 3.1° | 0.3° |
| N3 | C4 | O4 | C5 | 179.5° | 179.9° |
| N3 | C4 | C5 | C5M | 172.5° | 180.0° |
| N3 | C4 | C5 | C6 | 3.8° | 0.1° |
| HN3 | N3 | C4 | O4 | 5.0° | 0.0° |
| HN3 | N3 | C4 | C5 | 174.5° | 179.9° |
| O4 | C4 | C5 | C5M | 6.9° | 0.1° |
| O4 | C4 | C5 | C6 | 176.7° | 179.9° |
| C4 | C5 | C5M | C6 | 176.4° | 179.8° |
| C4 | C5 | C5M | H71 | 164.2° | 0.1° |
| C4 | C5 | C5M | H72 | 75.8° | 120.1° |
| C4 | C5 | C5M | H73 | 43.6° | 119.9° |
| C4 | C5 | C6 | H6 | 179.9° | 180.0° |
| C5 | C5M | H71 | H72 | 120.2° | 120.0° |
| C5 | C5M | H71 | H73 | 121.9° | 120.0° |
| C5 | C5M | H72 | H73 | 120.5° | 120.0° |
| C5M | C5 | C6 | H6 | 3.6° | 0.2° |
| C6 | C5 | C5M | H71 | 19.4° | 179.9° |
| C6 | C5 | C5M | H72 | 100.6° | 60.1° |
| C6 | C5 | C5M | H73 | 140.1° | 59.9° |
| H71 | C5M | H72 | H73 | 117.7° | 120.1° |
