TC
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O4' | C4' | sing | 1.44Å | 1.52Å | |
| O4' | C1' | sing | 1.44Å | 1.53Å | |
| O2' | C2' | sing | 1.43Å | 1.19Å | |
| C4' | C3' | sing | 1.55Å | 1.50Å | |
| O2 | C2 | doub | 1.22Å | 1.40Å | |
| C1' | C2' | sing | 1.54Å | 1.48Å | |
| C1' | N1 | sing | 1.47Å | 1.41Å | |
| C3' | C2' | sing | 1.55Å | 1.41Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| O2P | P | doub | 1.48Å | 1.48Å | |
| C2 | N1 | sing | 1.35Å | 1.39Å | |
| C2 | N3 | sing | 1.33Å | 1.44Å | |
| N1 | C6 | sing | 1.36Å | 1.41Å | |
| O3' | P | sing | 1.61Å | 1.59Å | |
| P | O1P | doub | 1.48Å | 1.48Å | |
| N3 | C4 | doub | 1.33Å | 1.36Å | |
| C6 | C5 | doub | 1.35Å | 1.40Å | |
| C4 | C5 | sing | 1.41Å | 1.43Å | |
| C4 | N4 | sing | 1.38Å | 1.45Å | |
| C1' | H1 | sing | 1.09Å | 1.10Å | |
| C2' | H2 | sing | 1.09Å | 1.10Å | |
| C3' | H3 | sing | 1.09Å | 1.10Å | |
| C4' | H4 | sing | 1.09Å | 1.10Å | |
| C4' | H5 | sing | 1.09Å | 1.10Å | |
| C5 | H6 | sing | 1.08Å | 1.08Å | |
| C6 | H7 | sing | 1.08Å | 1.08Å | |
| N4 | H8 | sing | 0.97Å | 1.00Å | |
| N4 | H9 | sing | 0.97Å | 1.00Å | |
| O2' | H11 | sing | 0.97Å | 0.95Å | |
| P | O3P | sing | 1.61Å | 1.60Å | |
| O3P | H10 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C4' | O4' | C1' | 100.3° | 107.0° |
| O4' | C4' | C3' | 108.1° | 103.5° |
| O4' | C4' | H4 | 109.8° | 110.6° |
| O4' | C4' | H5 | 109.8° | 110.8° |
| O4' | C1' | C2' | 108.2° | 107.3° |
| O4' | C1' | N1 | 106.2° | 109.9° |
| O4' | C1' | H1 | 108.9° | 110.0° |
| O2' | C2' | C1' | 110.0° | 110.5° |
| O2' | C2' | C3' | 106.1° | 110.6° |
| O2' | C2' | H2 | 114.2° | 110.4° |
| C2' | O2' | H11 | 109.5° | 114.0° |
| C4' | C3' | C2' | 108.9° | 102.1° |
| C4' | C3' | O3' | 111.6° | 110.9° |
| C4' | C3' | H3 | 109.8° | 111.0° |
| C3' | C4' | H4 | 109.8° | 110.6° |
| C3' | C4' | H5 | 109.8° | 110.6° |
| O2 | C2 | N1 | 119.6° | 119.4° |
| O2 | C2 | N3 | 120.3° | 119.5° |
| C2' | C1' | N1 | 113.4° | 109.9° |
| C1' | C2' | C3' | 106.9° | 104.2° |
| C2' | C1' | H1 | 109.6° | 109.9° |
| C1' | C2' | H2 | 109.2° | 110.5° |
| C1' | N1 | C2 | 118.6° | 119.8° |
| C1' | N1 | C6 | 122.4° | 119.8° |
| N1 | C1' | H1 | 110.5° | 109.8° |
| C2' | C3' | O3' | 104.7° | 110.9° |
| C3' | C2' | H2 | 110.2° | 110.4° |
| C2' | C3' | H3 | 111.0° | 110.9° |
| C3' | O3' | P | 123.6° | 123.0° |
| O3' | C3' | H3 | 110.8° | 110.8° |
| O2P | P | O3' | 110.0° | 109.5° |
| O2P | P | O1P | 106.2° | 109.5° |
| O2P | P | O3P | 116.5° | 109.5° |
| N1 | C2 | N3 | 120.0° | 121.1° |
| C2 | N1 | C6 | 118.9° | 120.3° |
| C2 | N3 | C4 | 120.8° | 120.8° |
| N1 | C6 | C5 | 121.2° | 119.3° |
| N1 | C6 | H7 | 119.4° | 120.3° |
| O3' | P | O1P | 107.6° | 109.5° |
| O3' | P | O3P | 103.6° | 109.4° |
| O1P | P | O3P | 112.7° | 109.4° |
| N3 | C4 | C5 | 119.6° | 119.6° |
| N3 | C4 | N4 | 120.2° | 120.2° |
| C6 | C5 | C4 | 119.4° | 119.0° |
| C6 | C5 | H6 | 120.3° | 120.5° |
| C5 | C6 | H7 | 119.4° | 120.4° |
| C5 | C4 | N4 | 120.2° | 120.2° |
| C4 | C5 | H6 | 120.3° | 120.5° |
| C4 | N4 | H8 | 120.0° | 120.0° |
| C4 | N4 | H9 | 120.0° | 120.0° |
| H4 | C4' | H5 | 109.4° | 110.5° |
| H8 | N4 | H9 | 120.0° | 120.0° |
| P | O3P | H10 | 109.5° | 114.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O4' | C4' | C3' | H4 | 119.8° | 118.5° |
| O4' | C4' | C3' | H5 | 119.8° | 118.7° |
| C4' | O4' | C1' | C2' | 27.8° | 26.5° |
| C4' | O4' | C1' | N1 | 94.3° | 145.9° |
| O4' | C4' | C3' | C2' | 8.5° | 37.0° |
| O4' | C4' | C3' | O3' | 123.6° | 81.2° |
| C4' | O4' | C1' | H1 | 146.8° | 93.1° |
| O4' | C4' | C3' | H3 | 113.2° | 155.2° |
| O4' | C4' | H4 | H5 | 120.6° | 123.1° |
| O4' | C1' | C2' | O2' | 90.6° | 120.8° |
| C1' | O4' | C4' | C3' | 21.7° | 40.0° |
| O4' | C1' | C2' | N1 | 117.5° | 119.4° |
| O4' | C1' | C2' | H1 | 118.5° | 119.6° |
| O4' | C1' | N1 | H1 | 117.9° | 121.1° |
| O4' | C1' | C2' | C3' | 24.1° | 2.0° |
| O4' | C1' | N1 | C2 | 73.4° | 52.8° |
| O4' | C1' | N1 | C6 | 105.1° | 127.1° |
| O4' | C1' | C2' | H2 | 143.3° | 116.6° |
| C1' | O4' | C4' | H4 | 98.1° | 78.5° |
| C1' | O4' | C4' | H5 | 141.5° | 158.6° |
| O2' | C2' | C3' | C4' | 107.9° | 97.9° |
| O2' | C2' | C1' | C3' | 114.7° | 118.8° |
| O2' | C2' | C1' | H2 | 126.1° | 122.5° |
| O2' | C2' | C1' | N1 | 151.9° | 119.7° |
| O2' | C2' | C3' | H2 | 124.0° | 122.6° |
| O2' | C2' | C3' | O3' | 132.6° | 144.0° |
| O2' | C2' | C1' | H1 | 27.9° | 1.2° |
| O2' | C2' | C3' | H3 | 13.1° | 20.4° |
| C4' | C3' | C2' | C1' | 9.5° | 20.9° |
| C4' | C3' | C2' | O3' | 119.5° | 118.2° |
| C4' | C3' | C2' | H3 | 120.9° | 118.2° |
| C4' | C3' | O3' | H3 | 122.6° | 123.7° |
| C4' | C3' | O3' | P | 86.2° | 127.3° |
| C4' | C3' | C2' | H2 | 128.1° | 139.6° |
| C3' | C4' | H4 | H5 | 120.6° | 122.9° |
| O2 | C2 | N1 | C1' | 1.4° | 0.2° |
| O2 | C2 | N1 | N3 | 179.8° | 179.8° |
| O2 | C2 | N1 | C6 | 180.0° | 179.7° |
| O2 | C2 | N3 | C4 | 179.8° | 179.8° |
| C2' | C1' | N1 | H1 | 123.4° | 121.0° |
| C1' | C2' | C3' | H2 | 118.6° | 118.7° |
| C1' | C2' | C3' | O3' | 110.0° | 97.3° |
| C2' | C1' | N1 | C2 | 168.0° | 65.0° |
| C2' | C1' | N1 | C6 | 13.5° | 115.0° |
| C1' | C2' | C3' | H3 | 130.4° | 139.1° |
| C1' | C2' | O2' | H11 | 180.0° | 180.0° |
| N1 | C1' | C2' | C3' | 93.4° | 121.4° |
| C1' | N1 | C2 | C6 | 178.5° | 180.0° |
| C1' | N1 | C2 | N3 | 178.8° | 180.0° |
| C1' | N1 | C6 | C5 | 178.8° | 180.0° |
| N1 | C1' | C2' | H2 | 25.8° | 2.8° |
| C1' | N1 | C6 | H7 | 1.2° | 0.0° |
| C2' | C3' | O3' | H3 | 119.7° | 123.6° |
| C2' | C3' | O3' | P | 156.2° | 120.0° |
| C3' | C2' | C1' | H1 | 142.7° | 117.6° |
| C2' | C3' | C4' | H4 | 111.3° | 81.5° |
| C2' | C3' | C4' | H5 | 128.3° | 155.7° |
| C3' | C2' | O2' | H11 | 64.7° | 65.1° |
| C3' | O3' | P | O2P | 30.6° | 45.0° |
| C3' | O3' | P | O1P | 145.9° | 75.0° |
| O3' | C3' | C2' | H2 | 8.6° | 21.4° |
| O3' | C3' | C4' | H4 | 3.8° | 160.3° |
| O3' | C3' | C4' | H5 | 116.6° | 37.5° |
| C3' | O3' | P | O3P | 94.6° | 165.0° |
| O2P | P | O3' | O1P | 115.3° | 120.0° |
| O2P | P | O3' | O3P | 125.2° | 120.0° |
| O2P | P | O1P | O3P | 128.7° | 120.0° |
| O2P | P | O3P | H10 | 123.1° | 60.0° |
| N1 | C2 | N3 | C4 | 0.1° | 0.0° |
| C2 | N1 | C6 | C5 | 0.3° | 0.1° |
| C2 | N1 | C1' | H1 | 44.5° | 173.9° |
| C2 | N1 | C6 | H7 | 179.7° | 180.0° |
| N3 | C2 | N1 | C6 | 0.3° | 0.1° |
| C2 | N3 | C4 | C5 | 0.2° | 0.1° |
| C2 | N3 | C4 | N4 | 179.9° | 180.0° |
| N1 | C6 | C5 | H7 | 180.0° | 179.9° |
| N1 | C6 | C5 | C4 | 0.1° | 0.0° |
| C6 | N1 | C1' | H1 | 137.0° | 6.0° |
| N1 | C6 | C5 | H6 | 179.9° | 180.0° |
| O3' | P | O1P | O3P | 113.6° | 120.0° |
| P | O3' | C3' | H3 | 36.5° | 3.6° |
| O3' | P | O3P | H10 | 116.0° | 180.0° |
| O1P | P | O3P | H10 | 0.0° | 60.0° |
| N3 | C4 | C5 | C6 | 0.2° | 0.1° |
| N3 | C4 | C5 | N4 | 180.0° | 179.9° |
| N3 | C4 | C5 | H6 | 179.8° | 180.0° |
| N3 | C4 | N4 | H8 | 0.0° | 180.0° |
| N3 | C4 | N4 | H9 | 180.0° | 0.1° |
| C6 | C5 | C4 | H6 | 180.0° | 180.0° |
| C6 | C5 | C4 | N4 | 179.9° | 180.0° |
| C4 | C5 | C6 | H7 | 179.9° | 179.9° |
| C5 | C4 | N4 | H8 | 180.0° | 0.1° |
| C5 | C4 | N4 | H9 | 0.0° | 180.0° |
| N4 | C4 | C5 | H6 | 0.1° | 0.0° |
| C4 | N4 | H8 | H9 | 180.0° | 179.9° |
| H1 | C1' | C2' | H2 | 98.1° | 123.8° |
| H2 | C2' | C3' | H3 | 111.0° | 102.2° |
| H2 | C2' | O2' | H11 | 56.8° | 57.4° |
| H3 | C3' | C4' | H4 | 127.0° | 36.7° |
| H3 | C3' | C4' | H5 | 6.6° | 86.1° |
| H6 | C5 | C6 | H7 | 0.1° | 0.0° |
