Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

T6E

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C4C5sing1.42Å1.46ÅAromatic
C4N3doub1.32Å1.41ÅAromatic
C4NBFsing1.38Å1.37Å
C5C6doub1.40Å1.44ÅAromatic
C5CBBsing1.46Å1.43ÅAromatic
C6N1sing1.34Å1.38ÅAromatic
C6Ssing1.76Å1.71ÅAromatic
N1C2doub1.31Å1.39ÅAromatic
N3C2sing1.32Å1.39ÅAromatic
CBBCAZsing1.48Å1.43Å
CBBC8doub1.33Å1.35ÅAromatic
CAZCAOsing1.39Å1.43ÅAromatic
CAZCANdoub1.39Å1.43ÅAromatic
CAOCAMdoub1.38Å1.43ÅAromatic
CAMCAXsing1.39Å1.44ÅAromatic
CANCALsing1.38Å1.41ÅAromatic
CALCAXdoub1.39Å1.45ÅAromatic
CAXNATsing1.40Å1.44Å
NATCAVsing1.35Å1.42Å
CAVOADdoub1.22Å1.22Å
CAVNAUsing1.35Å1.41Å
NAUCAYsing1.40Å1.42Å
CAYCAPsing1.39Å1.43ÅAromatic
CAYCAJdoub1.39Å1.44ÅAromatic
CAPCBAdoub1.38Å1.41ÅAromatic
CAJCAHsing1.38Å1.43ÅAromatic
CAJF1sing1.35Å1.32Å
CAHCAKdoub1.38Å1.42ÅAromatic
CAKCBAsing1.38Å1.42ÅAromatic
CBACBGsing1.51Å1.52Å
CBGFAFsing1.40Å1.32Å
CBGFAGsing1.40Å1.34Å
CBGFAEsing1.40Å1.33Å
SC8sing1.75Å1.71ÅAromatic
NBFHBF1sing0.97Å1.00Å
NBFHBF2sing0.97Å1.00Å
C2H2sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
CAOHAOsing1.08Å1.08Å
CANHANsing1.08Å1.08Å
CAMHAMsing1.08Å1.08Å
CALHALsing1.08Å1.08Å
NATHATsing0.97Å1.00Å
NAUHAUsing0.97Å1.00Å
CAPHAPsing1.08Å1.08Å
CAHHAHsing1.08Å1.08Å
CAKHAKsing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5C4N3120.7°119.0°
C5C4NBF124.0°120.5°
C4C5C6116.1°117.6°
C4C5CBB133.9°130.3°
N3C4NBF115.3°120.5°
C4N3C2116.2°121.1°
C4NBFHBF1109.5°120.0°
C4NBFHBF2109.5°120.0°
C6C5CBB110.0°112.1°
C5C6N1125.0°119.1°
C5C6S111.8°109.9°
C5CBBCAZ126.1°122.8°
C5CBBC8112.7°114.4°
N1C6S123.2°131.0°
C6N1C2113.7°121.0°
C6SC891.1°92.4°
N1C2N3128.3°122.2°
N1C2H2115.8°118.9°
N3C2H2115.8°118.9°
CAZCBBC8121.2°122.8°
CBBCAZCAO125.1°120.0°
CBBCAZCAN113.8°120.1°
CBBC8S114.5°111.3°
CBBC8H8122.8°124.3°
CAOCAZCAN121.2°119.9°
CAZCAOCAM119.3°119.9°
CAZCAOHAO120.3°120.1°
CAZCANCAL119.9°119.9°
CAZCANHAN120.1°120.1°
CAOCAMCAX120.0°120.1°
CAMCAOHAO120.4°120.0°
CAOCAMHAM120.0°120.0°
CAMCAXCAL119.5°120.1°
CAMCAXNAT118.4°119.9°
CAXCAMHAM120.0°119.9°
CANCALCAX120.2°120.1°
CALCANHAN120.1°120.0°
CANCALHAL119.9°120.0°
CALCAXNAT122.1°120.0°
CAXCALHAL119.9°120.0°
CAXNATCAV130.0°120.0°
CAXNATHAT115.0°120.0°
NATCAVOAD124.2°120.0°
NATCAVNAU113.8°120.0°
CAVNATHAT115.0°120.0°
OADCAVNAU122.0°120.0°
CAVNAUCAY124.0°120.0°
CAVNAUHAU118.0°120.0°
NAUCAYCAP122.4°120.0°
NAUCAYCAJ118.9°120.1°
CAYNAUHAU118.0°120.0°
CAPCAYCAJ118.7°119.9°
CAYCAPCBA120.0°119.9°
CAYCAPHAP120.0°120.0°
CAYCAJCAH121.2°119.9°
CAYCAJF1119.5°120.0°
CAPCBACAK121.2°120.1°
CAPCBACBG119.5°119.9°
CBACAPHAP120.0°120.1°
CAHCAJF1119.3°120.1°
CAJCAHCAK118.8°120.0°
CAJCAHHAH120.6°120.0°
CAHCAKCBA120.1°120.2°
CAKCAHHAH120.6°120.0°
CAHCAKHAK119.9°120.0°
CAKCBACBG119.3°119.9°
CBACAKHAK120.0°119.9°
CBACBGFAF115.7°109.5°
CBACBGFAG113.1°109.5°
CBACBGFAE114.3°109.4°
FAFCBGFAG104.1°109.5°
FAFCBGFAE104.2°109.5°
FAGCBGFAE104.2°109.5°
SC8H8122.7°124.4°
HBF1NBFHBF2109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5C4N3NBF179.5°179.8°
C4C5C6CBB180.0°180.0°
C4C5C6N10.1°0.1°
C4C5C6S179.9°180.0°
C5C4N3C20.6°0.1°
C4C5CBBCAZ2.0°0.0°
C4C5CBBC8179.9°180.0°
C5C4NBFHBF1179.5°3.9°
C5C4NBFHBF259.4°176.0°
N3C4C5C60.0°0.1°
N3C4C5CBB180.0°180.0°
C4N3C2N11.5°0.1°
N3C4NBFHBF10.0°175.8°
N3C4NBFHBF2120.0°4.2°
C4N3C2H2178.5°180.0°
NBFC4C5C6179.5°179.7°
NBFC4C5CBB0.5°0.3°
NBFC4N3C2179.9°179.7°
C4NBFHBF1HBF2120.0°179.9°
C5C6N1S179.8°179.9°
C5C6N1C20.8°0.1°
C6C5CBBCAZ178.0°179.9°
C6C5CBBC80.1°0.0°
C5C6SC80.1°0.1°
CBBC5C6N1179.9°180.0°
CBBC5C6S0.0°0.0°
C5CBBCAZC8177.7°179.9°
C5CBBCAZCAO109.5°59.0°
C5CBBCAZCAN70.8°121.3°
C5CBBC8S0.2°0.0°
C5CBBC8H8179.8°180.0°
C6N1C2N31.6°0.1°
N1C6SC8179.9°180.0°
C6N1C2H2178.4°180.0°
SC6N1C2179.4°180.0°
C6SC8CBB0.2°0.1°
C6SC8H8179.8°180.0°
N1C2N3H2180.0°179.9°
CBBCAZCAOCAN179.7°179.8°
CBBCAZCAOCAM179.1°180.0°
CBBCAZCANCAL179.0°180.0°
CAZCBBC8S178.2°180.0°
CAZCBBC8H81.8°0.1°
CBBCAZCAOHAO0.9°0.0°
CBBCAZCANHAN1.0°0.1°
C8CBBCAZCAO72.8°121.0°
C8CBBCAZCAN106.9°58.8°
CBBC8SH8180.0°179.9°
CAZCAOCAMHAO180.0°180.0°
CAZCAOCAMCAX0.7°0.1°
CAOCAZCANCAL0.7°0.2°
CAOCAZCANHAN179.3°179.7°
CAZCAOCAMHAM179.3°180.0°
CANCAZCAOCAM0.6°0.2°
CAZCANCALHAN180.0°179.9°
CAZCANCALCAX0.9°0.1°
CANCAZCAOHAO179.4°179.8°
CAZCANCALHAL179.1°180.0°
CAOCAMCAXHAM180.0°179.9°
CAOCAMCAXCAL0.9°0.3°
CAOCAMCAXNAT179.8°180.0°
CAMCAXCALCAN1.0°0.4°
CAMCAXCALNAT178.9°179.7°
CAMCAXNATCAV169.4°144.9°
CAXCAMCAOHAO179.3°179.9°
CAMCAXCALHAL179.0°179.7°
CAMCAXNATHAT10.6°35.1°
CANCALCAXHAL180.0°179.9°
CANCALCAXNAT179.9°180.0°
CALCAXNATCAV11.7°35.5°
CAXCALCANHAN179.1°180.0°
CALCAXCAMHAM179.1°179.8°
CALCAXNATHAT168.2°144.6°
CAXNATCAVHAT180.0°179.9°
CAXNATCAVOAD0.0°4.4°
CAXNATCAVNAU179.5°175.6°
NATCAXCAMHAM0.2°0.1°
NATCAXCALHAL0.1°0.1°
NATCAVOADNAU179.5°180.0°
NATCAVNAUCAY161.0°176.4°
NATCAVNAUHAU19.0°3.6°
OADCAVNAUCAY18.5°3.6°
OADCAVNATHAT180.0°175.6°
OADCAVNAUHAU161.4°176.4°
CAVNAUCAYHAU180.0°180.0°
CAVNAUCAYCAP52.0°25.6°
CAVNAUCAYCAJ128.5°154.1°
NAUCAVNATHAT0.4°4.4°
NAUCAYCAPCAJ179.4°179.7°
NAUCAYCAPCBA179.8°180.0°
NAUCAYCAJCAH179.5°179.9°
NAUCAYCAJF10.2°0.0°
NAUCAYCAPHAP0.2°0.1°
CAYCAPCBAHAP180.0°180.0°
CAPCAYCAJCAH0.1°0.3°
CAPCAYCAJF1179.6°179.7°
CAYCAPCBACAK0.9°0.0°
CAYCAPCBACBG179.5°180.0°
CAPCAYNAUHAU127.9°154.4°
CAJCAYCAPCBA0.7°0.3°
CAYCAJCAHF1179.7°180.0°
CAYCAJCAHCAK0.4°0.0°
CAJCAYNAUHAU51.5°25.9°
CAJCAYCAPHAP179.3°179.7°
CAYCAJCAHHAH179.6°180.0°
CAPCBACAKCAH0.4°0.2°
CAPCBACAKCBG179.7°180.0°
CAPCBACBGFAF88.8°90.0°
CAPCBACBGFAG31.2°150.0°
CAPCBACBGFAE150.2°30.0°
CAPCBACAKHAK179.7°180.0°
CAJCAHCAKHAH180.0°180.0°
CAJCAHCAKCBA0.3°0.3°
CAJCAHCAKHAK179.7°180.0°
F1CAJCAHCAK179.8°180.0°
F1CAJCAHHAH0.1°0.0°
CAHCAKCBAHAK180.0°179.7°
CAHCAKCBACBG180.0°179.7°
CAKCBACBGFAF90.9°90.0°
CAKCBACBGFAG149.1°30.0°
CAKCBACBGFAE30.1°150.0°
CAKCBACAPHAP179.1°180.0°
CBACAKCAHHAH179.7°179.7°
CBACBGFAFFAG124.7°120.0°
CBACBGFAFFAE126.3°120.0°
CBACBGFAGFAE124.7°119.9°
CBGCBACAPHAP0.6°0.0°
CBGCBACAKHAK0.0°0.0°
FAFCBGFAGFAE108.9°120.0°
HAOCAOCAMHAM0.7°0.0°
HANCANCALHAL0.9°0.1°
HAHCAHCAKHAK0.3°0.0°

253795

PDB entries from 2026-05-20

PDB statisticsPDBj update infoContact PDBjnumon