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T5V

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CNsing1.40Å1.34Å
CC1sing1.39Å1.42ÅAromatic
C1N1doub1.32Å1.34ÅAromatic
N1C2sing1.32Å1.38ÅAromatic
C2N2doub1.32Å1.35ÅAromatic
N2C3sing1.32Å1.34ÅAromatic
C3Cdoub1.39Å1.42ÅAromatic
NH1sing0.97Å1.00Å
NHsing0.97Å1.00Å
C1H2sing1.08Å1.08Å
C2H3sing1.08Å1.08Å
C3H4sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NCC1121.8°120.9°
NCC3121.9°120.9°
CNH1109.5°120.0°
CNH109.5°120.0°
CC1N1122.3°119.0°
C1CC3116.3°118.2°
CC1H2118.9°120.5°
C1N1C2116.0°120.9°
N1C1H2118.8°120.5°
N1C2N2126.5°121.9°
N1C2H3116.8°119.1°
C2N2C3116.7°120.9°
N2C2H3116.8°119.1°
N2C3C122.2°119.0°
N2C3H4118.9°120.5°
CC3H4118.9°120.5°
H1NH109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NCC1C3178.2°180.0°
NCC1N1177.2°180.0°
NCC3N2177.9°180.0°
CNH1H120.0°180.0°
NCC1H22.8°0.1°
NCC3H42.1°0.1°
CC1N1H2180.0°179.9°
CC1N1C20.9°0.0°
C1CC3N20.3°0.0°
C1CNH1180.0°0.0°
C1CNH60.0°180.0°
C1CC3H4179.7°179.9°
C1N1C2N20.0°0.0°
N1C1CC31.1°0.0°
C1N1C2H3180.0°179.9°
N1C2N2H3180.0°179.9°
N1C2N2C30.7°0.0°
C2N1C1H2179.1°179.9°
C2N2C3C0.5°0.0°
C2N2C3H4179.5°179.9°
N2C3CH4180.0°179.9°
C3N2C2H3179.3°179.9°
C3CNH11.9°180.0°
C3CNH118.1°0.0°
C3CC1H2178.9°179.9°

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PDB entries from 2024-07-24

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