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T5D

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
COsing1.43Å1.39Å
C1Csing1.53Å1.54Å
C2C1sing1.51Å1.52Å
C2Ndoub1.32Å1.38ÅAromatic
NC3sing1.32Å1.36ÅAromatic
C3C4doub1.38Å1.41ÅAromatic
C4C5sing1.39Å1.39ÅAromatic
C5C6doub1.39Å1.38ÅAromatic
C6C2sing1.38Å1.42ÅAromatic
C1C7sing1.54Å1.53Å
C7C8sing1.55Å1.53Å
C8C9sing1.55Å1.52Å
C9C10sing1.54Å1.53Å
C10C1sing1.54Å1.54Å
C4H4sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C7H7sing1.09Å1.10Å
C7H8sing1.09Å1.10Å
C8H9sing1.09Å1.10Å
C8H10sing1.09Å1.10Å
C10H14sing1.09Å1.10Å
C10H13sing1.09Å1.10Å
CH2sing1.09Å1.10Å
CH1sing1.09Å1.10Å
OHsing0.97Å0.95Å
C3H3sing1.08Å1.08Å
C9H11sing1.09Å1.10Å
C9H12sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OCC1109.1°109.5°
OCH2109.6°109.5°
OCH1109.6°109.5°
COH109.5°114.0°
CC1C2110.1°110.0°
CC1C7110.6°110.0°
CC1C10109.6°110.0°
C1CH2109.5°109.5°
C1CH1109.6°109.5°
C1C2N119.2°119.6°
C1C2C6118.8°119.6°
C2C1C7111.7°110.1°
C2C1C10111.2°110.0°
C2NC3117.0°121.8°
NC2C6122.0°120.8°
NC3C4123.5°120.8°
NC3H3118.3°119.7°
C3C4C5118.7°119.1°
C3C4H4120.6°120.4°
C4C3H3118.2°119.6°
C4C5C6119.6°118.5°
C5C4H4120.7°120.4°
C4C5H5120.2°120.7°
C5C6C2119.3°119.2°
C6C5H5120.2°120.8°
C5C6H6120.4°120.4°
C2C6H6120.3°120.4°
C1C7C8106.7°104.2°
C7C1C10103.4°106.6°
C1C7H7110.1°110.5°
C1C7H8110.2°110.6°
C7C8C9106.9°102.8°
C8C7H7110.2°110.5°
C8C7H8110.2°110.6°
C7C8H9110.1°110.8°
C7C8H10110.1°110.8°
C8C9C10105.4°104.2°
C9C8H9110.1°110.8°
C9C8H10110.1°110.8°
C8C9H11110.5°110.5°
C8C9H12110.5°110.5°
C9C10C1104.1°106.6°
C9C10H14110.8°110.1°
C9C10H13110.8°110.1°
C10C9H11110.5°110.5°
C10C9H12110.5°110.5°
C1C10H14110.8°110.0°
C1C10H13110.8°110.0°
H7C7H8109.5°110.4°
H9C8H10109.5°110.8°
H14C10H13109.5°110.0°
H2CH1109.5°109.4°
H11C9H12109.5°110.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OCC1H2119.9°120.0°
OCC1H1119.9°120.1°
OCC1C245.3°58.6°
OCC1C7169.3°62.9°
OCC1C1077.3°180.0°
OCH2H1120.2°120.0°
CC1C2C7123.3°121.4°
CC1C2C10121.7°121.4°
CC1C2N103.5°106.4°
CC1C2C676.9°73.6°
CC1C7C10117.3°119.3°
CC1C7C891.3°95.7°
CC1C10C981.4°119.3°
CC1C7H728.3°145.6°
CC1C7H8149.2°23.1°
CC1C10H1437.7°121.4°
CC1C10H13159.5°0.1°
C1CH2H1120.2°120.0°
C1COH180.0°180.0°
C1C2NC6179.5°180.0°
C1C2NC3178.4°179.8°
C1C2C6C5178.4°180.0°
C2C1C7C10119.7°119.3°
C2C1C7C8145.7°142.9°
C2C1C10C9156.6°119.3°
C1C2C6H61.6°0.0°
C2C1C7H794.7°24.2°
C2C1C7H826.1°98.3°
C2C1C10H1484.2°0.0°
C2C1C10H1337.5°121.3°
C2C1CH2165.2°61.4°
C2C1CH174.7°178.6°
C2NC3C40.2°0.5°
NC2C6C51.2°0.0°
NC2C1C7133.2°132.2°
NC2C1C1018.2°15.0°
NC2C6H6178.8°180.0°
C2NC3H3179.8°179.9°
NC3C4H3180.0°179.6°
NC3C4C50.6°0.5°
C3NC2C61.1°0.2°
NC3C4H4179.4°179.8°
C3C4C5H4180.0°179.8°
C3C4C5C60.5°0.2°
C3C4C5H5179.5°179.8°
C4C5C6H5180.0°180.0°
C4C5C6C20.3°0.0°
C4C5C6H6179.7°180.0°
C5C4C3H3179.4°180.0°
C5C6C2H6180.0°179.9°
C6C5C4H4179.5°180.0°
C6C2C1C746.4°47.8°
C6C2C1C10161.4°165.0°
C2C6C5H5179.7°179.9°
C1C7C8H7119.6°118.7°
C1C7C8H8119.6°118.8°
C1C7C8C95.7°37.9°
C7C1C10C936.5°0.0°
C1C7H7H8121.3°122.6°
C1C7C8H9113.9°80.4°
C1C7C8H10125.3°156.3°
C7C1C10H14155.7°119.3°
C7C1C10H1382.6°119.3°
C7C1CH270.8°177.1°
C7C1CH149.3°57.2°
C7C8C9H9119.6°118.3°
C7C8C9H10119.6°118.3°
C7C8C9C1017.2°38.0°
C8C7C1C1026.0°23.6°
C8C7H7H8121.3°122.6°
C7C8H9H10121.2°123.3°
C7C8C9H11102.2°156.6°
C7C8C9H12136.6°80.7°
C8C9C10H11119.4°118.7°
C8C9C10H12119.3°118.7°
C8C9C10C133.4°23.6°
C9C8C7H7125.3°80.7°
C9C8C7H8113.9°156.8°
C9C8H9H10121.2°123.3°
C8C9C10H14152.6°142.9°
C8C9C10H1385.7°95.7°
C8C9H11H12121.9°122.7°
C9C10C1H14119.1°119.3°
C9C10C1H13119.1°119.3°
C10C9C8H9136.8°80.4°
C10C9C8H10102.4°156.3°
C9C10H14H13122.5°121.5°
C10C9H11H12121.9°122.6°
C10C1C7H7145.6°95.1°
C10C1C7H893.5°142.4°
C1C10H14H13122.5°121.3°
C10C1CH242.6°60.0°
C10C1CH1162.7°60.0°
C1C10C9H1185.9°142.3°
C1C10C9H12152.8°95.1°
H4C4C5H50.5°0.1°
H4C4C3H30.6°0.2°
H5C5C6H60.3°0.0°
H7C7C8H95.7°160.9°
H7C7C8H10115.1°37.6°
H8C7C8H9126.5°38.4°
H8C7C8H105.7°84.9°
H9C8C9H1117.4°38.3°
H9C8C9H12103.8°160.9°
H10C8C9H11138.3°85.1°
H10C8C9H1217.0°37.6°
H14C10C9H1133.2°98.4°
H14C10C9H1288.1°24.2°
H13C10C9H11155.0°23.0°
H13C10C9H1233.7°145.6°
H2COH60.1°60.0°
H1COH60.1°60.0°

222036

PDB entries from 2024-07-03

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