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T3F

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
PBO2Bsing1.61Å1.60Å
O2BHO2Bsing0.97Å0.95Å
O3BPBsing1.61Å1.61Å
PBO1Bdoub1.48Å1.49Å
PBO3Asing1.61Å1.62Å
C1QO3Bsing1.43Å1.46Å
O5QC1Qsing1.43Å1.42Å
C2QC1Qsing1.53Å1.54Å
C1QH1Qsing1.09Å1.10Å
C5QO5Qsing1.43Å1.44Å
C6QC5Qsing1.53Å1.53Å
C4QC5Qsing1.53Å1.53Å
C5QH5Qsing1.09Å1.10Å
C6QH6Qsing1.09Å1.10Å
C6QH6QAsing1.09Å1.10Å
C6QH6QBsing1.09Å1.10Å
C3QC2Qsing1.53Å1.54Å
C2QO2Qsing1.43Å1.44Å
C2QH2Qsing1.09Å1.10Å
O2QHO2Qsing0.97Å0.95Å
C4QC3Qsing1.53Å1.55Å
N3QC3Qsing1.47Å1.50Å
C3QH3Qsing1.09Å1.10Å
N3QHN3Qsing1.01Å1.00Å
N3QHN3Asing1.01Å1.00Å
O4QC4Qsing1.43Å1.44Å
C4QH4Qsing1.09Å1.10Å
O4QHO4Qsing0.97Å0.95Å
O3APAsing1.61Å1.63Å
PAO5'sing1.61Å1.61Å
PAO2Adoub1.48Å1.61Å
PAO1Asing1.61Å1.51Å
O1AHO1Asing0.97Å0.95Å
C5'O5'sing1.43Å1.42Å
C5'C4'sing1.53Å1.54Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
C3'C4'sing1.55Å1.57Å
C4'O4'sing1.44Å1.47Å
C4'H4'sing1.09Å1.10Å
O4'C1'sing1.44Å1.44Å
C3'O3'sing1.43Å1.42Å
C3'C2'sing1.55Å1.54Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C2'C1'sing1.54Å1.58Å
C2'H2'sing1.09Å1.10Å
C2'H2'Asing1.09Å1.10Å
C1'N1sing1.47Å1.49Å
C1'H1'sing1.09Å1.10Å
C6N1sing1.37Å1.39Å
N1C2sing1.35Å1.37Å
C2O2doub1.22Å1.23Å
C2N3sing1.35Å1.36Å
C4N3sing1.35Å1.37Å
N3HN3sing0.97Å1.00Å
C6C5doub1.35Å1.38Å
C6H6sing1.08Å1.08Å
C5MC5sing1.51Å1.52Å
C5C4sing1.42Å1.45Å
C5MH5Msing1.09Å1.10Å
C5MH5MAsing1.09Å1.10Å
C5MH5MBsing1.09Å1.10Å
C4O4doub1.22Å1.24Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
PBO2BHO2B109.5°114.0°
O2BPBO3B113.8°109.5°
O2BPBO1B112.1°109.5°
O2BPBO3A111.0°109.5°
O3BPBO1B103.7°109.5°
O3BPBO3A102.1°109.5°
PBO3BC1Q118.1°123.0°
O1BPBO3A113.5°109.4°
PBO3APA120.6°134.0°
O3BC1QO5Q106.0°109.5°
O3BC1QC2Q113.2°109.4°
O3BC1QH1Q110.7°109.5°
O5QC1QC2Q113.2°109.4°
O5QC1QH1Q110.8°109.5°
C1QO5QC5Q110.5°114.1°
C2QC1QH1Q103.1°109.4°
C1QC2QC3Q108.0°109.1°
C1QC2QO2Q105.8°109.5°
C1QC2QH2Q112.8°109.5°
O5QC5QC6Q105.2°109.4°
O5QC5QC4Q110.1°109.4°
O5QC5QH5Q111.4°109.5°
C6QC5QC4Q108.3°109.5°
C6QC5QH5Q113.1°109.5°
C5QC6QH6Q109.5°109.5°
C5QC6QH6QA109.4°109.4°
C5QC6QH6QB109.5°109.4°
C4QC5QH5Q108.6°109.5°
C5QC4QC3Q110.7°109.2°
C5QC4QO4Q106.8°109.5°
C5QC4QH4Q110.0°109.5°
H6QC6QH6QA109.5°109.5°
H6QC6QH6QB109.4°109.5°
H6QAC6QH6QB109.5°109.5°
C3QC2QO2Q109.6°109.6°
C3QC2QH2Q109.2°109.6°
C2QC3QC4Q110.0°109.1°
C2QC3QN3Q110.9°109.5°
C2QC3QH3Q109.3°109.6°
O2QC2QH2Q111.3°109.5°
C2QO2QHO2Q109.5°114.0°
C4QC3QN3Q112.7°109.6°
C4QC3QH3Q107.3°109.5°
C3QC4QO4Q108.3°109.5°
C3QC4QH4Q108.6°109.6°
N3QC3QH3Q106.4°109.5°
C3QN3QHN3Q109.5°111.0°
C3QN3QHN3A109.5°111.0°
HN3QN3QHN3A109.5°110.9°
O4QC4QH4Q112.4°109.6°
C4QO4QHO4Q109.5°114.0°
O3APAO5'103.9°109.5°
O3APAO2A102.4°109.4°
O3APAO1A117.7°109.5°
O5'PAO2A106.0°109.4°
O5'PAO1A115.1°109.5°
PAO5'C5'111.7°123.0°
O2APAO1A110.3°109.5°
PAO1AHO1A109.5°114.0°
O5'C5'C4'106.8°109.5°
O5'C5'H5'110.3°109.5°
O5'C5'H5'A111.0°109.5°
C4'C5'H5'110.4°109.5°
C4'C5'H5'A110.9°109.4°
C5'C4'C3'110.4°110.6°
C5'C4'O4'111.5°110.6°
C5'C4'H4'106.6°110.5°
H5'C5'H5'A107.4°109.5°
C3'C4'O4'106.4°103.5°
C3'C4'H4'111.6°110.8°
C4'C3'O3'109.3°110.9°
C4'C3'C2'102.1°102.1°
C4'C3'H3'113.3°111.0°
O4'C4'H4'110.5°110.6°
C4'O4'C1'111.1°106.9°
O4'C1'C2'105.4°107.3°
O4'C1'N1109.6°109.9°
O4'C1'H1'111.1°109.9°
O3'C3'C2'106.5°110.9°
O3'C3'H3'109.3°110.8°
C3'O3'HO3'109.5°114.0°
C2'C3'H3'115.8°110.9°
C3'C2'C1'102.9°104.2°
C3'C2'H2'111.7°110.5°
C3'C2'H2'A113.1°110.5°
C1'C2'H2'111.7°110.5°
C1'C2'H2'A113.1°110.4°
C2'C1'N1106.4°109.9°
C2'C1'H1'114.0°109.9°
H2'C2'H2'A104.5°110.5°
N1C1'H1'110.1°110.0°
C1'N1C6121.0°119.7°
C1'N1C2119.8°119.7°
C6N1C2119.2°120.6°
N1C6C5121.8°119.7°
N1C6H6119.1°120.2°
N1C2O2121.2°119.6°
N1C2N3120.4°120.9°
O2C2N3118.4°119.6°
C2N3C4122.3°120.3°
C2N3HN3118.9°119.8°
C4N3HN3118.8°119.9°
N3C4C5118.3°119.4°
N3C4O4118.7°120.3°
C5C6H6119.1°120.1°
C6C5C5M119.8°120.4°
C6C5C4117.9°119.1°
C5MC5C4122.2°120.4°
C5C5MH5M109.5°109.5°
C5C5MH5MA109.5°109.5°
C5C5MH5MB109.4°109.5°
C5C4O4123.0°120.3°
H5MC5MH5MA109.5°109.5°
H5MC5MH5MB109.5°109.5°
H5MAC5MH5MB109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2BPBO3BO1B122.1°120.0°
O2BPBO3BO3A119.7°120.0°
O2BPBO1BO3A126.9°120.0°
O2BPBO3BC1Q33.1°65.1°
O2BPBO3APA60.8°75.0°
HO2BO2BPBO3B17.2°60.0°
HO2BO2BPBO1B100.1°180.0°
HO2BO2BPBO3A131.7°60.0°
O3BPBO1BO3A110.0°120.0°
PBO3BC1QO5Q106.1°90.0°
PBO3BC1QC2Q129.2°150.1°
PBO3BC1QH1Q14.0°30.1°
O3BPBO3APA177.6°165.0°
O1BPBO3BC1Q155.2°55.0°
O1BPBO3APA66.6°45.0°
O3APBO3BC1Q86.6°175.0°
PBO3APAO5'123.9°165.0°
PBO3APAO2A125.9°45.0°
PBO3APAO1A4.8°75.0°
O3BC1QO5QC2Q124.7°119.9°
O3BC1QO5QH1Q120.1°120.1°
O3BC1QC2QH1Q119.7°120.0°
O3BC1QO5QC5Q61.0°58.8°
O3BC1QC2QC3Q62.8°62.4°
O3BC1QC2QO2Q54.5°57.6°
O3BC1QC2QH2Q176.4°177.6°
O5QC1QC2QH1Q119.7°120.0°
C1QO5QC5QC6Q178.4°178.8°
C1QO5QC5QC4Q61.9°61.2°
C1QO5QC5QH5Q58.7°58.8°
O5QC1QC2QC3Q57.8°57.6°
O5QC1QC2QO2Q175.1°177.5°
O5QC1QC2QH2Q63.0°62.4°
C2QC1QO5QC5Q63.7°61.1°
C1QC2QC3QO2Q114.8°119.9°
C1QC2QC3QH2Q123.0°119.9°
C1QC2QO2QH2Q122.9°120.1°
C1QC2QO2QHO2Q50.1°60.0°
C1QC2QC3QC4Q51.3°57.0°
C1QC2QC3QN3Q176.7°176.9°
C1QC2QC3QH3Q66.3°62.9°
H1QC1QO5QC5Q178.9°178.9°
H1QC1QC2QC3Q177.5°177.6°
H1QC1QC2QO2Q65.2°62.5°
H1QC1QC2QH2Q56.7°57.6°
O5QC5QC6QC4Q117.7°120.0°
O5QC5QC6QH5Q121.9°120.0°
O5QC5QC4QH5Q122.2°120.0°
O5QC5QC6QH6Q161.0°60.0°
O5QC5QC6QH6QA40.9°180.0°
O5QC5QC6QH6QB79.1°60.1°
O5QC5QC4QC3Q57.2°57.6°
O5QC5QC4QO4Q60.5°62.3°
O5QC5QC4QH4Q177.2°177.5°
C6QC5QC4QH5Q123.2°120.0°
C5QC6QH6QH6QA120.0°120.0°
C5QC6QH6QH6QB120.0°120.0°
C5QC6QH6QAH6QB120.0°119.9°
C6QC5QC4QC3Q171.8°177.6°
C6QC5QC4QO4Q54.0°57.7°
C6QC5QC4QH4Q68.2°62.5°
C4QC5QC6QH6Q43.3°180.0°
C4QC5QC6QH6QA76.8°60.0°
C4QC5QC6QH6QB163.2°59.9°
C5QC4QC3QC2Q53.0°57.0°
C5QC4QC3QO4Q116.8°119.8°
C5QC4QC3QH4Q120.9°119.9°
C5QC4QC3QN3Q177.3°176.9°
C5QC4QC3QH3Q65.9°62.9°
C5QC4QO4QH4Q120.7°120.1°
C5QC4QO4QHO4Q135.3°60.0°
H5QC5QC6QH6Q77.2°60.0°
H5QC5QC6QH6QA162.8°60.0°
H5QC5QC6QH6QB42.8°180.0°
H5QC5QC4QC3Q65.0°62.4°
H5QC5QC4QO4Q177.2°177.7°
H5QC5QC4QH4Q55.0°57.6°
H6QC6QH6QAH6QB120.0°120.1°
C3QC2QO2QH2Q120.9°120.2°
C3QC2QO2QHO2Q166.3°179.6°
C2QC3QC4QN3Q124.4°119.9°
C2QC3QC4QH3Q118.9°119.9°
C2QC3QN3QH3Q118.8°120.2°
C2QC3QN3QHN3Q152.8°60.0°
C2QC3QN3QHN3A87.2°63.9°
C2QC3QC4QO4Q63.9°62.9°
C2QC3QC4QH4Q173.9°176.9°
O2QC2QC3QC4Q166.1°176.9°
O2QC2QC3QN3Q68.5°63.2°
O2QC2QC3QH3Q48.4°57.0°
H2QC2QO2QHO2Q72.7°60.1°
H2QC2QC3QC4Q71.7°62.9°
H2QC2QC3QN3Q53.6°57.0°
H2QC2QC3QH3Q170.6°177.2°
C4QC3QN3QH3Q117.4°120.2°
C4QC3QN3QHN3Q28.9°179.6°
C4QC3QN3QHN3A148.9°55.7°
C3QC4QO4QH4Q119.9°120.2°
C3QC4QO4QHO4Q105.4°179.7°
C3QN3QHN3QHN3A120.0°123.9°
N3QC3QC4QO4Q60.5°57.0°
N3QC3QC4QH4Q61.8°63.2°
H3QC3QN3QHN3Q88.4°60.3°
H3QC3QN3QHN3A31.5°175.9°
H3QC3QC4QO4Q177.3°177.2°
H3QC3QC4QH4Q55.0°57.0°
H4QC4QO4QHO4Q14.5°60.1°
O3APAO5'O2A107.5°119.9°
O3APAO5'O1A130.2°120.1°
O3APAO2AO1A126.1°120.0°
O3APAO1AHO1A156.5°60.1°
O3APAO5'C5'75.6°175.0°
O5'PAO2AO1A125.3°120.0°
O5'PAO1AHO1A80.3°60.0°
PAO5'C5'C4'162.4°180.0°
PAO5'C5'H5'77.6°59.9°
PAO5'C5'H5'A41.4°60.1°
O2APAO1AHO1A39.6°180.0°
O2APAO5'C5'176.9°55.0°
O1APAO5'C5'54.6°64.9°
O5'C5'C4'H5'120.0°120.0°
O5'C5'C4'H5'A121.0°120.0°
O5'C5'H5'H5'A121.1°120.0°
O5'C5'C4'C3'50.5°179.5°
O5'C5'C4'O4'67.6°66.5°
O5'C5'C4'H4'171.8°56.4°
C4'C5'H5'H5'A121.1°119.9°
C5'C4'C3'O4'121.1°118.4°
C5'C4'C3'H4'118.3°123.0°
C5'C4'O4'H4'118.3°122.8°
C5'C4'O4'C1'113.8°158.6°
C5'C4'C3'O3'152.1°86.3°
C5'C4'C3'C2'95.3°155.5°
C5'C4'C3'H3'29.9°37.3°
H5'C5'C4'C3'69.5°60.5°
H5'C5'C4'O4'172.4°53.6°
H5'C5'C4'H4'51.8°176.4°
H5'AC5'C4'C3'171.5°59.5°
H5'AC5'C4'O4'53.4°173.5°
H5'AC5'C4'H4'67.2°63.6°
C3'C4'O4'H4'121.3°118.7°
C3'C4'O4'C1'6.6°40.1°
C4'C3'O3'C2'109.7°112.7°
C4'C3'O3'H3'124.5°123.7°
C4'C3'C2'H3'123.6°118.3°
C4'C3'O3'HO3'74.8°180.0°
C4'C3'C2'C1'33.7°20.9°
C4'C3'C2'H2'86.3°139.6°
C4'C3'C2'H2'A156.1°97.7°
O4'C4'C3'O3'86.8°155.3°
O4'C4'C3'C2'25.8°37.1°
O4'C4'C3'H3'151.0°81.2°
C4'O4'C1'C2'15.2°26.6°
C4'O4'C1'N1129.4°146.0°
C4'O4'C1'H1'108.7°92.9°
H4'C4'O4'C1'127.9°78.6°
H4'C4'C3'O3'33.8°36.7°
H4'C4'C3'C2'146.4°81.5°
H4'C4'C3'H3'88.4°160.2°
O4'C1'C2'C3'31.0°2.1°
O4'C1'C2'N1116.4°119.4°
O4'C1'C2'H1'122.1°119.5°
O4'C1'C2'H2'89.0°116.6°
O4'C1'C2'H2'A153.4°120.8°
O4'C1'N1H1'122.5°121.1°
O4'C1'N1C627.5°126.7°
O4'C1'N1C2154.0°53.5°
O3'C3'C2'H3'121.8°123.5°
O3'C3'C2'C1'80.9°139.1°
O3'C3'C2'H2'159.1°102.2°
O3'C3'C2'H2'A41.5°20.5°
C2'C3'O3'HO3'34.8°67.2°
C3'C2'C1'H2'120.0°118.7°
C3'C2'C1'H2'A122.4°118.7°
C3'C2'H2'H2'A122.7°122.7°
C3'C2'C1'N1147.4°121.5°
C3'C2'C1'H1'91.0°117.4°
H3'C3'O3'HO3'160.6°56.4°
H3'C3'C2'C1'157.3°97.4°
H3'C3'C2'H2'37.3°21.3°
H3'C3'C2'H2'A80.3°144.0°
C1'C2'H2'H2'A122.7°122.5°
C2'C1'N1H1'124.0°121.1°
C2'C1'N1C686.0°115.5°
C2'C1'N1C292.5°64.3°
H2'C2'C1'N127.4°2.7°
H2'C2'C1'H1'149.0°123.9°
H2'AC2'C1'N190.2°119.8°
H2'AC2'C1'H1'31.4°1.3°
C1'N1C6C2178.5°179.8°
C1'N1C2O22.0°0.0°
C1'N1C2N3177.2°180.0°
C1'N1C6C5177.7°180.0°
C1'N1C6H62.3°0.0°
H1'C1'N1C6150.0°5.6°
H1'C1'N1C231.6°174.6°
C6N1C2O2179.5°179.7°
C6N1C2N31.3°0.2°
N1C6C5H6180.0°179.9°
N1C6C5C5M179.8°180.0°
N1C6C5C40.6°0.0°
N1C2O2N3179.2°180.0°
N1C2N3C40.2°0.0°
N1C2N3HN3179.8°180.0°
C2N1C6C50.8°0.2°
C2N1C6H6179.2°179.7°
O2C2N3C4179.5°179.9°
O2C2N3HN30.6°0.0°
C2N3C4HN3180.0°180.0°
C2N3C4C51.2°0.2°
C2N3C4O4179.0°180.0°
N3C4C5C61.6°0.2°
N3C4C5C5M179.2°179.8°
N3C4C5O4179.7°179.9°
HN3N3C4C5178.7°179.8°
HN3N3C4O41.0°0.1°
C6C5C5MC4179.1°180.0°
C6C5C5MH5M35.5°90.0°
C6C5C5MH5MA155.5°150.0°
C6C5C5MH5MB84.5°30.0°
C6C5C4O4178.7°180.0°
H6C6C5C5M0.2°0.1°
H6C6C5C4179.3°179.9°
C5C5MH5MH5MA120.0°120.0°
C5C5MH5MH5MB120.0°120.0°
C5C5MH5MAH5MB120.0°120.0°
C5MC5C4O40.5°0.0°
C4C5C5MH5M143.6°90.0°
C4C5C5MH5MA23.6°30.0°
C4C5C5MH5MB96.4°150.0°
H5MC5MH5MAH5MB120.0°120.0°

227111

PDB entries from 2024-11-06

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