T1D
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.21Å | 1.21Å | |
C | N | sing | 1.34Å | 1.34Å | |
C | C1 | sing | 1.49Å | 1.52Å | |
N | S | sing | 1.67Å | 1.60Å | |
N | H | sing | 0.97Å | 1.02Å | |
S | O1 | doub | 1.42Å | 1.56Å | |
S | O2 | doub | 1.42Å | 1.55Å | |
S | N1 | sing | 1.67Å | 1.56Å | |
N1 | C1 | sing | 1.47Å | 1.46Å | |
N1 | C2 | sing | 1.40Å | 1.42Å | |
C1 | H1 | sing | 1.09Å | 1.11Å | |
C1 | H11A | sing | 1.09Å | 1.12Å | |
C2 | C3 | doub | 1.39Å | 1.40Å | Aromatic |
C2 | C7 | sing | 1.39Å | 1.40Å | Aromatic |
C3 | C4 | sing | 1.39Å | 1.42Å | Aromatic |
C3 | H3 | sing | 1.08Å | 1.10Å | |
C4 | C5 | doub | 1.39Å | 1.40Å | Aromatic |
C4 | C9 | sing | 1.48Å | 1.40Å | Aromatic |
C5 | C6 | sing | 1.38Å | 1.40Å | Aromatic |
C5 | H5 | sing | 1.08Å | 1.10Å | |
C6 | C7 | doub | 1.39Å | 1.40Å | Aromatic |
C6 | H6 | sing | 1.08Å | 1.10Å | |
C7 | O3 | sing | 1.36Å | 1.37Å | |
O3 | C8 | sing | 1.43Å | 1.44Å | |
C8 | H8C1 | sing | 1.09Å | 1.11Å | |
C8 | H8C2 | sing | 1.09Å | 1.11Å | |
C8 | H8C3 | sing | 1.09Å | 1.12Å | |
C9 | C10 | doub | 1.39Å | 1.40Å | Aromatic |
C9 | C14 | sing | 1.39Å | 1.41Å | Aromatic |
C10 | C11 | sing | 1.38Å | 1.41Å | Aromatic |
C10 | H10 | sing | 1.08Å | 1.10Å | |
C11 | C12 | doub | 1.38Å | 1.40Å | Aromatic |
C11 | H11 | sing | 1.08Å | 1.10Å | |
C12 | C13 | sing | 1.38Å | 1.41Å | Aromatic |
C12 | H12 | sing | 1.08Å | 1.10Å | |
C13 | C14 | doub | 1.38Å | 1.40Å | Aromatic |
C13 | H13 | sing | 1.08Å | 1.10Å | |
C14 | H14 | sing | 1.08Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | N | 125.7° | 122.5° |
O | C | C1 | 121.5° | 122.5° |
N | C | C1 | 112.9° | 115.0° |
C | N | S | 111.5° | 107.2° |
C | N | H | 124.2° | 126.4° |
C | C1 | N1 | 103.9° | 111.5° |
C | C1 | H1 | 114.3° | 109.1° |
C | C1 | H11A | 114.4° | 109.1° |
S | N | H | 124.3° | 126.4° |
N | S | O1 | 111.7° | 106.4° |
N | S | O2 | 113.4° | 106.4° |
N | S | N1 | 98.7° | 102.5° |
O1 | S | O2 | 112.1° | 126.4° |
O1 | S | N1 | 109.0° | 106.0° |
O2 | S | N1 | 111.0° | 106.8° |
S | N1 | C1 | 113.0° | 103.9° |
S | N1 | C2 | 127.5° | 128.0° |
C1 | N1 | C2 | 119.4° | 128.1° |
N1 | C1 | H1 | 114.3° | 109.1° |
N1 | C1 | H11A | 114.3° | 109.1° |
N1 | C2 | C3 | 123.4° | 120.0° |
N1 | C2 | C7 | 117.0° | 120.1° |
H1 | C1 | H11A | 96.1° | 108.9° |
C3 | C2 | C7 | 119.5° | 119.9° |
C2 | C3 | C4 | 120.4° | 119.9° |
C2 | C3 | H3 | 119.8° | 120.0° |
C2 | C7 | C6 | 120.6° | 120.1° |
C2 | C7 | O3 | 118.2° | 119.9° |
C4 | C3 | H3 | 119.8° | 120.1° |
C3 | C4 | C5 | 119.0° | 119.9° |
C3 | C4 | C9 | 123.3° | 120.0° |
C5 | C4 | C9 | 117.7° | 120.1° |
C4 | C5 | C6 | 120.7° | 120.1° |
C4 | C5 | H5 | 119.7° | 119.9° |
C4 | C9 | C10 | 120.2° | 120.1° |
C4 | C9 | C14 | 120.5° | 120.2° |
C6 | C5 | H5 | 119.7° | 120.0° |
C5 | C6 | C7 | 119.8° | 120.1° |
C5 | C6 | H6 | 120.1° | 120.0° |
C7 | C6 | H6 | 120.1° | 119.9° |
C6 | C7 | O3 | 121.1° | 120.0° |
C7 | O3 | C8 | 123.0° | 106.8° |
O3 | C8 | H8C1 | 123.0° | 109.5° |
O3 | C8 | H8C2 | 107.4° | 109.5° |
O3 | C8 | H8C3 | 107.4° | 109.5° |
H8C1 | C8 | H8C2 | 107.4° | 109.4° |
H8C1 | C8 | H8C3 | 107.4° | 109.5° |
H8C2 | C8 | H8C3 | 102.4° | 109.4° |
C10 | C9 | C14 | 119.3° | 119.7° |
C9 | C10 | C11 | 121.0° | 119.9° |
C9 | C10 | H10 | 119.5° | 120.0° |
C9 | C14 | C13 | 119.6° | 119.9° |
C9 | C14 | H14 | 120.2° | 120.0° |
C11 | C10 | H10 | 119.5° | 120.1° |
C10 | C11 | C12 | 119.8° | 120.1° |
C10 | C11 | H11 | 120.1° | 120.0° |
C12 | C11 | H11 | 120.1° | 119.9° |
C11 | C12 | C13 | 119.3° | 120.3° |
C11 | C12 | H12 | 120.4° | 119.9° |
C13 | C12 | H12 | 120.4° | 119.8° |
C12 | C13 | C14 | 121.0° | 120.1° |
C12 | C13 | H13 | 119.5° | 120.0° |
C14 | C13 | H13 | 119.5° | 119.9° |
C13 | C14 | H14 | 120.2° | 120.1° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | N | C1 | 179.7° | 180.0° |
O | C | N | S | 179.4° | 179.7° |
O | C | N | H | 0.5° | 0.0° |
O | C | C1 | N1 | 179.1° | 180.0° |
O | C | C1 | H1 | 55.6° | 59.5° |
O | C | C1 | H11A | 53.8° | 59.5° |
C | N | S | H | 180.0° | 179.7° |
C | N | S | O1 | 112.8° | 111.5° |
C | N | S | O2 | 119.3° | 111.5° |
C | N | S | N1 | 1.8° | 0.4° |
N | C | C1 | N1 | 0.6° | 0.0° |
N | C | C1 | H1 | 124.6° | 120.6° |
N | C | C1 | H11A | 125.9° | 120.5° |
C1 | C | N | S | 0.8° | 0.3° |
C1 | C | N | H | 179.2° | 180.0° |
C | C1 | N1 | S | 1.9° | 0.3° |
C | C1 | N1 | H1 | 125.2° | 120.6° |
C | C1 | N1 | H11A | 125.3° | 120.6° |
C | C1 | N1 | C2 | 178.5° | 180.0° |
C | C1 | H1 | H11A | 120.2° | 119.1° |
N | S | O1 | O2 | 128.6° | 125.6° |
N | S | O1 | N1 | 108.1° | 108.7° |
N | S | O2 | N1 | 110.1° | 108.9° |
N | S | N1 | C1 | 2.2° | 0.4° |
N | S | N1 | C2 | 178.5° | 179.9° |
H | N | S | O1 | 67.2° | 68.7° |
H | N | S | O2 | 60.7° | 68.2° |
H | N | S | N1 | 178.2° | 179.9° |
O1 | S | O2 | N1 | 122.2° | 125.4° |
O1 | S | N1 | C1 | 114.5° | 111.8° |
O1 | S | N1 | C2 | 61.8° | 68.5° |
O2 | S | N1 | C1 | 121.5° | 111.2° |
O2 | S | N1 | C2 | 62.2° | 68.5° |
S | N1 | C1 | C2 | 176.6° | 179.7° |
S | N1 | C1 | H1 | 123.4° | 120.3° |
S | N1 | C1 | H11A | 127.2° | 120.8° |
S | N1 | C2 | C3 | 88.8° | 95.3° |
S | N1 | C2 | C7 | 92.3° | 84.1° |
N1 | C1 | H1 | H11A | 120.2° | 119.0° |
C1 | N1 | C2 | C3 | 95.1° | 85.0° |
C1 | N1 | C2 | C7 | 83.7° | 95.5° |
C2 | N1 | C1 | H1 | 53.3° | 59.4° |
C2 | N1 | C1 | H11A | 56.2° | 59.5° |
N1 | C2 | C3 | C7 | 178.8° | 179.5° |
N1 | C2 | C3 | C4 | 179.8° | 180.0° |
N1 | C2 | C3 | H3 | 0.1° | 0.3° |
N1 | C2 | C7 | C6 | 179.0° | 180.0° |
N1 | C2 | C7 | O3 | 0.4° | 0.2° |
C2 | C3 | C4 | H3 | 180.0° | 179.7° |
C2 | C3 | C4 | C5 | 1.6° | 0.3° |
C2 | C3 | C4 | C9 | 179.7° | 179.7° |
C3 | C2 | C7 | C6 | 0.1° | 0.5° |
C3 | C2 | C7 | O3 | 179.3° | 179.7° |
C7 | C2 | C3 | C4 | 1.0° | 0.6° |
C7 | C2 | C3 | H3 | 179.0° | 179.8° |
C2 | C7 | C6 | C5 | 0.2° | 0.2° |
C2 | C7 | C6 | O3 | 179.4° | 179.8° |
C2 | C7 | C6 | H6 | 179.8° | 179.8° |
C2 | C7 | O3 | C8 | 170.9° | 179.7° |
C3 | C4 | C5 | C9 | 178.1° | 180.0° |
C3 | C4 | C5 | C6 | 1.4° | 0.1° |
C3 | C4 | C5 | H5 | 178.6° | 180.0° |
C3 | C4 | C9 | C10 | 26.7° | 140.1° |
C3 | C4 | C9 | C14 | 156.2° | 39.8° |
H3 | C3 | C4 | C5 | 178.3° | 179.9° |
H3 | C3 | C4 | C9 | 0.3° | 0.0° |
C4 | C5 | C6 | H5 | 180.0° | 179.9° |
C4 | C5 | C6 | C7 | 0.5° | 0.1° |
C4 | C5 | C6 | H6 | 179.5° | 179.9° |
C5 | C4 | C9 | C10 | 151.3° | 39.9° |
C5 | C4 | C9 | C14 | 25.8° | 140.3° |
C9 | C4 | C5 | C6 | 179.5° | 179.9° |
C9 | C4 | C5 | H5 | 0.4° | 0.0° |
C4 | C9 | C10 | C14 | 177.1° | 179.8° |
C4 | C9 | C10 | C11 | 178.6° | 180.0° |
C4 | C9 | C10 | H10 | 1.4° | 0.1° |
C4 | C9 | C14 | C13 | 177.9° | 179.7° |
C4 | C9 | C14 | H14 | 2.1° | 0.2° |
C5 | C6 | C7 | H6 | 180.0° | 180.0° |
C5 | C6 | C7 | O3 | 179.5° | 180.0° |
H5 | C5 | C6 | C7 | 179.4° | 180.0° |
H5 | C5 | C6 | H6 | 0.5° | 0.0° |
C6 | C7 | O3 | C8 | 8.5° | 0.1° |
H6 | C6 | C7 | O3 | 0.5° | 0.0° |
C7 | O3 | C8 | H8C1 | 180.0° | 60.1° |
C7 | O3 | C8 | H8C2 | 54.7° | 180.0° |
C7 | O3 | C8 | H8C3 | 54.8° | 60.0° |
O3 | C8 | H8C1 | H8C2 | 125.3° | 120.0° |
O3 | C8 | H8C1 | H8C3 | 125.2° | 120.1° |
O3 | C8 | H8C2 | H8C3 | 112.9° | 120.0° |
H8C1 | C8 | H8C2 | H8C3 | 112.9° | 120.0° |
C9 | C10 | C11 | H10 | 180.0° | 180.0° |
C9 | C10 | C11 | C12 | 1.5° | 0.0° |
C9 | C10 | C11 | H11 | 178.5° | 180.0° |
C10 | C9 | C14 | C13 | 0.8° | 0.4° |
C10 | C9 | C14 | H14 | 179.2° | 180.0° |
C14 | C9 | C10 | C11 | 1.5° | 0.2° |
C14 | C9 | C10 | H10 | 178.5° | 179.8° |
C9 | C14 | C13 | C12 | 0.1° | 0.5° |
C9 | C14 | C13 | H14 | 180.0° | 179.6° |
C9 | C14 | C13 | H13 | 179.9° | 179.7° |
C10 | C11 | C12 | H11 | 180.0° | 180.0° |
C10 | C11 | C12 | C13 | 0.8° | 0.0° |
C10 | C11 | C12 | H12 | 179.1° | 180.0° |
H10 | C10 | C11 | C12 | 178.5° | 180.0° |
H10 | C10 | C11 | H11 | 1.5° | 0.0° |
C11 | C12 | C13 | H12 | 180.0° | 180.0° |
C11 | C12 | C13 | C14 | 0.2° | 0.2° |
C11 | C12 | C13 | H13 | 179.8° | 179.9° |
H11 | C11 | C12 | C13 | 179.2° | 180.0° |
H11 | C11 | C12 | H12 | 0.8° | 0.0° |
C12 | C13 | C14 | H13 | 180.0° | 179.8° |
C12 | C13 | C14 | H14 | 179.9° | 180.0° |
H12 | C12 | C13 | C14 | 179.8° | 179.8° |
H12 | C12 | C13 | H13 | 0.2° | 0.0° |
H13 | C13 | C14 | H14 | 0.1° | 0.2° |