Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

SZD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
F2C3sing1.35Å1.36Å
C2C3doub1.39Å1.37ÅAromatic
C2C1sing1.39Å1.37ÅAromatic
C3C4sing1.38Å1.38ÅAromatic
F1C1sing1.35Å1.36Å
C1C6doub1.38Å1.38ÅAromatic
C4C5doub1.40Å1.40ÅAromatic
C6C5sing1.40Å1.39ÅAromatic
C5C7sing1.48Å1.51Å
F3C20sing1.40Å1.33Å
F5C20sing1.40Å1.35Å
C20F4sing1.40Å1.32Å
C20O4sing1.43Å1.33Å
C7N1sing1.35Å1.37Å
C7O1doub1.22Å1.23Å
N1C8sing1.40Å1.42Å
O4C17sing1.36Å1.42Å
C9C8doub1.39Å1.40ÅAromatic
C9C10sing1.38Å1.38ÅAromatic
C8C13sing1.39Å1.40ÅAromatic
C18C17doub1.39Å1.39ÅAromatic
C18C19sing1.38Å1.38ÅAromatic
C17C16sing1.39Å1.39ÅAromatic
C10C11doub1.38Å1.39ÅAromatic
C13C12doub1.38Å1.39ÅAromatic
C19C14doub1.39Å1.39ÅAromatic
C16C15doub1.38Å1.38ÅAromatic
C11C12sing1.38Å1.39ÅAromatic
C12S1sing1.76Å1.77Å
C14C15sing1.39Å1.39ÅAromatic
C14N2sing1.40Å1.42Å
O3S1doub1.42Å1.46Å
N2S1sing1.66Å1.61Å
S1O2doub1.42Å1.44Å
N1H1sing0.97Å1.00Å
C4H2sing1.08Å1.08Å
C6H3sing1.08Å1.08Å
C10H4sing1.08Å1.08Å
C13H5sing1.08Å1.08Å
C15H6sing1.08Å1.08Å
C2H7sing1.08Å1.08Å
C9H8sing1.08Å1.08Å
C11H9sing1.08Å1.08Å
N2H10sing0.97Å1.00Å
C16H11sing1.08Å1.08Å
C18H12sing1.08Å1.08Å
C19H13sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
F2C3C2116.8°120.0°
F2C3C4119.8°119.9°
C3C2C1116.0°120.3°
C2C3C4123.4°120.1°
C3C2H7122.0°119.9°
C2C1F1117.7°119.9°
C2C1C6124.1°120.1°
C1C2H7122.0°119.9°
C3C4C5118.9°119.9°
C3C4H2120.5°120.1°
F1C1C6118.2°120.0°
C1C6C5118.9°119.9°
C1C6H3120.6°120.1°
C4C5C6118.7°119.8°
C4C5C7125.0°120.1°
C5C4H2120.5°120.1°
C6C5C7116.2°120.1°
C5C6H3120.6°120.1°
C5C7N1116.0°120.0°
C5C7O1120.7°120.0°
F3C20F5109.5°109.5°
F3C20F4107.9°109.5°
F3C20O4111.1°109.4°
F5C20F4108.4°109.5°
F5C20O4111.4°109.5°
F4C20O4108.5°109.5°
C20O4C17115.6°117.0°
N1C7O1123.3°120.0°
C7N1C8128.9°120.0°
C7N1H1115.6°119.9°
N1C8C9118.7°120.1°
N1C8C13121.4°120.0°
C8N1H1115.5°120.1°
O4C17C18120.0°120.0°
O4C17C16119.6°120.0°
C8C9C10120.3°119.9°
C9C8C13119.8°119.9°
C8C9H8119.9°120.1°
C9C10C11120.7°120.1°
C9C10H4119.6°120.0°
C10C9H8119.8°120.0°
C8C13C12118.7°119.9°
C8C13H5120.6°120.1°
C17C18C19119.7°120.0°
C18C17C16120.5°120.0°
C17C18H12120.1°120.0°
C18C19C14119.9°120.0°
C19C18H12120.2°120.0°
C18C19H13120.1°120.0°
C17C16C15119.4°120.0°
C17C16H11120.2°119.9°
C10C11C12118.9°120.1°
C11C10H4119.7°119.9°
C10C11H9120.5°119.9°
C13C12C11121.5°120.1°
C13C12S1119.1°120.0°
C12C13H5120.6°120.0°
C19C14C15120.2°120.0°
C19C14N2121.9°120.0°
C14C19H13120.1°120.0°
C16C15C14120.2°120.0°
C16C15H6119.9°120.0°
C15C16H11120.3°120.1°
C11C12S1119.3°119.9°
C12C11H9120.6°119.9°
C12S1O3109.4°106.4°
C12S1N2106.8°107.2°
C12S1O2104.7°106.4°
C15C14N2117.9°120.0°
C14C15H6119.9°120.0°
C14N2S1125.3°120.0°
C14N2H10105.4°120.0°
O3S1N2106.4°106.4°
O3S1O2119.4°123.1°
N2S1O2109.5°106.4°
S1N2H10105.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
F2C3C2C4179.6°179.5°
F2C3C2C1179.9°180.0°
F2C3C4C5179.8°180.0°
F2C3C4H20.2°0.2°
F2C3C2H70.1°0.5°
C3C2C1H7180.0°179.5°
C3C2C1F1179.1°179.7°
C3C2C1C60.6°0.4°
C2C3C4C50.6°0.6°
C2C3C4H2179.4°179.7°
C1C2C3C40.5°0.6°
C2C1F1C6179.7°179.9°
C2C1C6C50.8°0.1°
C2C1C6H3179.2°180.0°
C3C4C5H2180.0°179.7°
C3C4C5C60.7°0.3°
C3C4C5C7178.8°179.8°
C4C3C2H7179.5°180.0°
F1C1C6C5178.9°180.0°
F1C1C6H31.1°0.0°
F1C1C2H70.9°0.3°
C1C6C5C40.9°0.1°
C1C6C5H3180.0°179.9°
C1C6C5C7178.7°180.0°
C6C1C2H7179.4°179.8°
C4C5C6C7179.5°179.9°
C4C5C7N127.8°180.0°
C4C5C7O1153.9°0.0°
C4C5C6H3179.1°180.0°
C6C5C7N1151.7°0.1°
C6C5C7O126.6°179.9°
C6C5C4H2179.2°179.9°
C5C7N1O1178.3°180.0°
C5C7N1C8176.4°175.3°
C5C7N1H13.6°4.4°
C7C5C4H21.3°0.1°
C7C5C6H31.3°0.1°
F3C20F5F4117.5°120.0°
F3C20F5O4123.2°120.0°
F3C20F4O4120.4°120.0°
F3C20O4C17178.7°60.0°
F5C20F4O4121.0°120.0°
F5C20O4C1759.0°180.0°
F4C20O4C1760.2°60.0°
C20O4C17C1882.1°0.0°
C20O4C17C1696.9°180.0°
C7N1C8H1180.0°179.7°
C7N1C8C9175.6°35.6°
C7N1C8C137.5°144.7°
O1C7N1C81.9°4.7°
O1C7N1H1178.1°175.6°
N1C8C9C13177.0°179.7°
N1C8C9C10176.8°180.0°
N1C8C13C12178.0°179.9°
N1C8C13H52.0°0.0°
N1C8C9H83.2°0.1°
O4C17C18C16178.9°180.0°
O4C17C18C19178.4°179.7°
O4C17C16C15178.9°180.0°
O4C17C16H111.1°0.1°
O4C17C18H121.6°0.0°
C8C9C10H8180.0°179.9°
C8C9C10C111.7°0.0°
C9C8C13C121.1°0.2°
C9C8N1H14.4°144.6°
C8C9C10H4178.3°179.7°
C9C8C13H5178.9°179.7°
C10C9C8C130.3°0.3°
C9C10C11H4180.0°179.8°
C9C10C11C121.8°0.2°
C9C10C11H9178.2°179.8°
C8C13C12H5180.0°179.9°
C8C13C12C111.0°0.1°
C8C13C12S1176.5°180.0°
C13C8N1H1172.5°35.1°
C13C8C9H8179.8°179.8°
C17C18C19H12180.0°179.7°
C17C18C19C141.8°0.3°
C18C17C16C152.2°0.0°
C18C17C16H11177.8°179.9°
C17C18C19H13178.2°180.0°
C19C18C17C162.7°0.3°
C18C19C14H13180.0°179.7°
C18C19C14C150.5°0.0°
C18C19C14N2178.6°180.0°
C17C16C15H11180.0°179.9°
C17C16C15C140.8°0.3°
C17C16C15H6179.2°179.9°
C16C17C18H12177.3°180.0°
C10C11C12C130.4°0.3°
C10C11C12H9180.0°180.0°
C10C11C12S1177.9°179.8°
C11C10C9H8178.3°180.0°
C13C12C11S1177.5°179.9°
C13C12S1O33.8°18.3°
C13C12S1N2118.6°95.3°
C13C12S1O2125.3°151.2°
C13C12C11H9179.6°179.7°
C19C14C15C160.0°0.3°
C19C14C15N2179.1°180.0°
C19C14N2S12.9°45.3°
C19C14C15H6180.0°179.9°
C19C14N2H10125.1°134.6°
C14C19C18H12178.2°180.0°
C16C15C14H6180.0°179.6°
C16C15C14N2179.2°179.7°
C11C12S1O3178.6°161.6°
C11C12S1N263.8°84.8°
C11C12S1O252.3°28.7°
C12C11C10H4178.2°180.0°
C11C12C13H5179.0°180.0°
C12S1N2C1466.9°63.1°
C12S1O3N2115.0°114.1°
C12S1O3O2120.5°123.0°
C12S1N2O2112.8°113.6°
S1C12C13H53.5°0.1°
S1C12C11H92.1°0.2°
C12S1N2H1055.2°117.0°
C15C14N2S1176.2°134.7°
C15C14N2H1054.1°45.4°
C14C15C16H11179.2°179.6°
C15C14C19H13179.5°179.7°
C14N2S1O349.8°50.4°
C14N2S1H10122.1°179.9°
C14N2S1O2179.8°176.7°
N2C14C15H60.8°0.1°
N2C14C19H131.4°0.3°
O3S1N2O2130.4°132.9°
O3S1N2H10172.0°129.5°
O2S1N2H1057.6°3.4°
H4C10C9H81.7°0.2°
H4C10C11H91.8°0.0°
H6C15C16H110.8°0.0°
H12C18C19H131.8°0.3°

221371

PDB entries from 2024-06-19

PDB statisticsPDBj update infoContact PDBjnumon