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SYX

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CNsing1.47Å1.47Å
NC1sing1.47Å1.46Å
NC4sing1.47Å1.46Å
C1C2sing1.53Å1.51Å
C4C3sing1.53Å1.52Å
C3N1sing1.47Å1.47Å
C2N1sing1.47Å1.46Å
N1C5sing1.35Å1.34Å
C5C6sing1.51Å1.53Å
C5Odoub1.21Å1.22Å
C6C7sing1.54Å1.49Å
C6O1sing1.44Å1.43Å
C7C8sing1.55Å1.51Å
O1C9sing1.44Å1.43Å
C9C8sing1.55Å1.48Å
C4H1sing1.09Å1.10Å
C4H2sing1.09Å1.10Å
C6H3sing1.09Å1.10Å
C7H4sing1.09Å1.10Å
C7H5sing1.09Å1.10Å
C8H6sing1.09Å1.10Å
C8H7sing1.09Å1.10Å
CH9sing1.09Å1.10Å
CH10sing1.09Å1.10Å
CH11sing1.09Å1.10Å
C1H12sing1.09Å1.10Å
C1H13sing1.09Å1.10Å
C2H14sing1.09Å1.10Å
C2H15sing1.09Å1.10Å
C3H16sing1.09Å1.10Å
C3H17sing1.09Å1.10Å
C9H18sing1.09Å1.10Å
C9H19sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CNC1111.0°111.0°
CNC4110.9°111.2°
NCH9109.5°109.4°
NCH10109.5°109.4°
NCH11109.5°109.4°
C1NC4110.2°111.4°
NC1C2110.9°109.3°
NC1H12109.1°109.5°
NC1H13109.1°109.5°
NC4C3111.1°109.3°
NC4H1109.1°109.4°
NC4H2109.1°109.5°
C1C2N1109.4°108.5°
C2C1H12109.1°109.7°
C2C1H13109.1°109.3°
C1C2H14109.5°109.6°
C1C2H15109.5°109.6°
C4C3N1110.0°108.5°
C3C4H1109.1°109.5°
C3C4H2109.0°109.5°
C4C3H16109.3°109.7°
C4C3H17109.4°109.6°
C3N1C2111.5°118.2°
C3N1C5125.2°120.9°
N1C3H16109.3°109.6°
N1C3H17109.3°109.6°
C2N1C5123.3°120.9°
N1C2H14109.5°109.7°
N1C2H15109.5°109.7°
N1C5C6117.5°120.0°
N1C5O121.7°120.0°
C6C5O120.8°120.0°
C5C6C7112.3°109.9°
C5C6O1110.2°109.9°
C5C6H3108.1°109.8°
C7C6O1108.0°107.3°
C6C7C8105.1°104.1°
C7C6H3108.7°109.9°
C6C7H4110.5°110.5°
C6C7H5110.5°110.5°
C6O1C9107.0°107.0°
O1C6H3109.4°110.0°
C7C8C9102.7°102.1°
C8C7H4110.6°110.5°
C8C7H5110.6°110.5°
C7C8H6111.1°110.9°
C7C8H7111.1°110.9°
O1C9C8106.3°103.5°
O1C9H18110.2°110.6°
O1C9H19110.2°110.8°
C9C8H6111.1°110.9°
C9C8H7111.1°111.0°
C8C9H18110.3°110.6°
C8C9H19110.2°110.6°
H1C4H2109.5°109.5°
H4C7H5109.5°110.6°
H6C8H7109.5°110.8°
H9CH10109.5°109.5°
H9CH11109.5°109.5°
H10CH11109.5°109.5°
H12C1H13109.5°109.5°
H14C2H15109.5°109.8°
H16C3H17109.5°109.8°
H18C9H19109.5°110.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CNC1C4123.2°124.5°
CNC1C2148.8°172.7°
CNC4C385.8°172.8°
CNC4H134.5°67.2°
CNC4H2154.0°52.8°
NCH9H10120.0°120.0°
NCH9H11120.0°120.0°
NCH10H11120.0°120.0°
CNC1H1291.0°52.5°
CNC1H1328.6°67.5°
NC1C2H12120.2°120.1°
NC1C2H13120.2°119.8°
C1NC4C337.5°62.8°
NC1C2N168.6°53.7°
C1NC4H1157.7°57.1°
C1NC4H282.8°177.2°
C1NCH9180.0°60.0°
C1NCH1060.0°180.0°
C1NCH1160.0°60.0°
NC1H12H13119.4°120.0°
NC1C2H1451.3°173.5°
NC1C2H15171.4°66.0°
C4NC1C225.5°62.8°
NC4C3H1120.3°119.9°
NC4C3H2120.3°120.0°
NC4C3N165.5°53.8°
NC4H1H2119.3°120.1°
C4NCH957.2°175.4°
C4NCH1062.8°55.4°
C4NCH11177.2°64.6°
C4NC1H12145.8°176.9°
C4NC1H1394.7°56.9°
NC4C3H1654.6°65.9°
NC4C3H17174.4°173.5°
C1C2N1C339.7°51.5°
C1C2N1H14120.0°119.7°
C1C2N1H15120.0°119.7°
C1C2N1C5138.8°128.9°
C2C1H12H13119.4°120.0°
C1C2H14H15120.1°120.4°
C4C3N1H16120.1°119.8°
C4C3N1H17120.1°119.7°
C4C3N1C222.2°51.5°
C4C3N1C5159.3°128.9°
C3C4H1H2119.2°120.1°
C4C3H16H17119.8°120.4°
C3N1C2C5178.5°179.7°
C3N1C5C6158.4°0.3°
C3N1C5O21.0°179.7°
N1C3C4H1174.2°66.1°
N1C3C4H254.7°173.8°
C3N1C2H1480.2°171.1°
C3N1C2H15159.7°68.2°
N1C3H16H17119.7°120.5°
C2N1C5C619.9°180.0°
C2N1C5O160.7°0.1°
N1C2C1H12171.2°173.8°
N1C2C1H1351.6°66.1°
N1C2H14H15120.0°120.6°
C2N1C3H1697.9°68.3°
C2N1C3H17142.3°171.1°
N1C5C6O179.4°180.0°
N1C5C6C7143.2°65.0°
N1C5C6O196.3°177.1°
N1C5C6H323.3°56.0°
C5N1C2H14101.3°9.2°
C5N1C2H1518.8°111.4°
C5N1C3H1680.6°111.4°
C5N1C3H1739.2°9.2°
C5C6C7O1121.8°119.5°
C5C6C7H3119.6°120.9°
C5C6O1H3118.8°121.0°
C5C6C7C8115.9°121.5°
C5C6O1C9137.8°145.9°
C5C6C7H4124.8°119.9°
C5C6C7H53.4°2.8°
OC5C6C736.3°115.1°
OC5C6O184.3°2.9°
OC5C6H3156.2°124.0°
C7C6O1H3118.2°119.5°
C6C7C8H4119.3°118.7°
C6C7C8H5119.3°118.7°
C7C6O1C914.8°26.5°
C6C7C8C923.3°20.9°
C6C7H4H5122.0°122.7°
C6C7C8H6142.2°139.1°
C6C7C8H795.6°97.4°
O1C6C7C85.9°2.0°
C6O1C9C830.3°40.0°
O1C6C7H4113.4°120.6°
O1C6C7H5125.2°116.7°
C6O1C9H18149.9°78.5°
C6O1C9H1989.2°158.5°
C7C8C9O133.0°37.0°
C7C8C9H6118.9°118.2°
C7C8C9H7118.9°118.2°
C8C7C6H3124.5°117.6°
C8C7H4H5122.0°122.6°
C7C8H6H7123.1°123.6°
C7C8C9H18152.5°81.5°
C7C8C9H1986.5°155.7°
O1C9C8H18119.5°118.5°
O1C9C8H19119.5°118.7°
C9O1C6H3103.4°93.0°
O1C9C8H6151.9°155.2°
O1C9C8H785.9°81.2°
O1C9H18H19121.4°123.1°
C9C8C7H496.0°97.8°
C9C8C7H5142.6°139.5°
C9C8H6H7123.1°123.7°
C8C9H18H19121.5°122.8°
H1C4C3H1665.7°174.2°
H1C4C3H1754.1°53.6°
H2C4C3H16174.8°54.1°
H2C4C3H1765.4°66.5°
H3C6C7H45.2°1.1°
H3C6C7H5116.2°123.8°
H4C7C8H622.9°20.4°
H4C7C8H7145.1°143.9°
H5C7C8H698.5°102.2°
H5C7C8H723.7°21.3°
H6C8C9H1888.6°36.7°
H6C8C9H1932.4°86.1°
H7C8C9H1833.6°160.3°
H7C8C9H19154.6°37.5°
H9CH10H11120.0°120.1°
H12C1C2H1468.9°66.4°
H12C1C2H1551.2°54.1°
H13C1C2H14171.6°53.7°
H13C1C2H1568.4°174.2°

223532

PDB entries from 2024-08-07

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