Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

SYW

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C28N27sing1.47Å1.45Å
C25C24doub1.36Å1.39ÅAromatic
C25C26sing1.39Å1.35ÅAromatic
C24C23sing1.40Å1.40ÅAromatic
N27C26sing1.37Å1.42ÅAromatic
N27C29sing1.37Å1.29ÅAromatic
C26C31doub1.41Å1.45ÅAromatic
C29C30doub1.34Å1.41ÅAromatic
C23C21sing1.48Å1.43Å
C23C32doub1.39Å1.37ÅAromatic
O22C21doub1.22Å1.26Å
C21N04sing1.35Å1.41Å
C31C32sing1.39Å1.42ÅAromatic
C31C30sing1.47Å1.40ÅAromatic
N04C03sing1.47Å1.45Å
N04C05sing1.47Å1.41Å
C03C02sing1.53Å1.56Å
C05C06sing1.53Å1.57Å
C02N07sing1.47Å1.54Å
C02C01sing1.53Å1.49Å
C06N07sing1.47Å1.48Å
N07S08sing1.66Å1.63Å
O09S08doub1.42Å1.43Å
S08O10doub1.42Å1.45Å
S08C11sing1.76Å1.72Å
C11C12doub1.38Å1.39ÅAromatic
C11C20sing1.38Å1.41ÅAromatic
C12C13sing1.38Å1.43ÅAromatic
C20C19doub1.39Å1.36ÅAromatic
C13C14doub1.39Å1.39ÅAromatic
C19C14sing1.40Å1.46ÅAromatic
C19O18sing1.36Å1.33Å
C14N15sing1.40Å1.39Å
O18C16sing1.34Å1.45Å
N15C16sing1.35Å1.44Å
C16O17doub1.22Å1.18Å
C29H1sing1.08Å1.08Å
C28H2sing1.09Å1.10Å
C28H3sing1.09Å1.10Å
C28H4sing1.09Å1.10Å
C25H5sing1.08Å1.08Å
C20H6sing1.08Å1.08Å
C12H7sing1.08Å1.08Å
C13H8sing1.08Å1.08Å
C01H9sing1.09Å1.10Å
C01H10sing1.09Å1.10Å
C01H11sing1.09Å1.10Å
C02H12sing1.09Å1.10Å
C03H13sing1.09Å1.10Å
C03H14sing1.09Å1.10Å
C05H15sing1.09Å1.10Å
C05H16sing1.09Å1.10Å
C06H17sing1.09Å1.10Å
C06H18sing1.09Å1.10Å
N15H19sing0.97Å1.00Å
C24H20sing1.08Å1.08Å
C30H21sing1.08Å1.08Å
C32H22sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C28N27C26120.4°125.0°
C28N27C29130.5°125.0°
N27C28H2109.5°109.4°
N27C28H3109.5°109.5°
N27C28H4109.5°109.4°
C24C25C26122.0°120.3°
C25C24C23119.8°120.7°
C24C25H5119.0°119.8°
C25C24H20120.1°119.7°
C25C26N27132.3°133.2°
C25C26C31119.9°119.6°
C26C25H5119.0°119.9°
C24C23C21118.0°120.0°
C24C23C32119.3°120.0°
C23C24H20120.1°119.7°
C26N27C29109.0°110.0°
N27C26C31107.7°107.1°
N27C29C30110.5°109.9°
N27C29H1124.8°125.0°
C26C31C32116.5°120.1°
C26C31C30104.1°106.0°
C29C30C31108.5°106.9°
C30C29H1124.7°125.1°
C29C30H21125.7°126.5°
C21C23C32122.5°119.9°
C23C21O22122.1°120.1°
C23C21N04120.5°120.0°
C23C32C31122.3°119.4°
C23C32H22118.8°120.3°
O22C21N04117.4°120.0°
C21N04C03120.8°120.6°
C21N04C05125.6°120.6°
C32C31C30139.3°133.9°
C31C32H22118.9°120.4°
C31C30H21125.7°126.6°
C03N04C05113.1°118.8°
N04C03C02112.6°108.6°
N04C03H13108.7°109.6°
N04C03H14108.7°109.8°
N04C05C06106.5°108.6°
N04C05H15110.2°109.6°
N04C05H16110.2°109.6°
C03C02N0799.5°108.6°
C03C02C01115.5°109.6°
C03C02H12108.1°109.7°
C02C03H13108.7°109.6°
C02C03H14108.7°109.6°
C05C06N07110.3°108.6°
C06C05H15110.2°109.6°
C06C05H16110.2°109.6°
C05C06H17109.3°109.6°
C05C06H18109.3°109.6°
N07C02C01115.5°109.6°
C02N07C06111.2°118.8°
C02N07S08120.4°120.6°
N07C02H12108.5°109.6°
C02C01H9109.5°109.5°
C02C01H10109.5°109.5°
C02C01H11109.5°109.5°
C01C02H12109.1°109.6°
C06N07S08122.6°120.6°
N07C06H17109.3°109.7°
N07C06H18109.3°109.6°
N07S08O09108.1°106.4°
N07S08O10109.0°106.4°
N07S08C11107.2°107.2°
O09S08O10115.7°123.2°
O09S08C11107.4°106.4°
O10S08C11109.1°106.4°
S08C11C12118.6°119.8°
S08C11C20120.5°119.9°
C12C11C20120.4°120.3°
C11C12C13122.4°120.2°
C11C12H7118.8°119.9°
C11C20C19119.6°119.9°
C11C20H6120.2°120.0°
C12C13C14115.9°119.8°
C13C12H7118.8°119.9°
C12C13H8122.0°120.1°
C20C19C14120.0°119.7°
C20C19O18131.9°133.0°
C19C20H6120.2°120.0°
C13C14C19121.6°120.0°
C13C14N15132.8°133.3°
C14C13H8122.1°120.1°
C14C19O18108.1°107.3°
C19C14N15105.5°106.6°
C19O18C16112.8°109.2°
C14N15C16112.0°107.5°
C14N15H19124.0°126.3°
O18C16N15101.5°109.5°
O18C16O17125.6°125.3°
N15C16O17132.8°125.2°
C16N15H19124.0°126.3°
H2C28H3109.4°109.5°
H2C28H4109.5°109.5°
H3C28H4109.5°109.5°
H9C01H10109.5°109.4°
H9C01H11109.5°109.5°
H10C01H11109.4°109.5°
H13C03H14109.5°109.6°
H15C05H16109.5°109.7°
H17C06H18109.5°109.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C28N27C26C253.7°0.3°
C28N27C26C29177.7°180.0°
C28N27C26C31179.6°180.0°
C28N27C29C30179.2°179.8°
C28N27C29H10.8°0.2°
N27C28H2H3120.0°120.0°
N27C28H2H4120.0°119.9°
N27C28H3H4120.0°119.9°
C24C25C26H5180.0°179.9°
C25C24C23H20180.0°179.9°
C24C25C26N27177.5°180.0°
C24C25C26C311.1°0.3°
C25C24C23C21177.8°179.9°
C25C24C23C322.9°0.2°
C26C25C24C230.6°0.0°
C25C26N27C31176.7°179.7°
C25C26N27C29178.6°179.8°
C25C26C31C323.8°0.2°
C25C26C31C30176.8°180.0°
C26C25C24H20179.4°180.0°
C24C23C21C32174.7°179.7°
C24C23C21O22128.3°137.5°
C24C23C21N0454.1°42.4°
C24C23C32C315.9°0.2°
C23C24C25H5179.4°180.0°
C24C23C32H22174.1°179.7°
C26N27C29C303.4°0.2°
N27C26C31C32179.0°180.0°
N27C26C31C300.4°0.2°
C26N27C29H1176.6°179.8°
C26N27C28H2180.0°90.0°
C26N27C28H360.0°150.0°
C26N27C28H460.0°30.0°
N27C26C25H52.5°0.1°
C29N27C26C311.9°0.0°
N27C29C30H1180.0°179.9°
N27C29C30C313.7°0.3°
C29N27C28H22.9°90.1°
C29N27C28H3117.1°30.0°
C29N27C28H4122.9°150.0°
N27C29C30H21176.3°179.9°
C26C31C30C292.3°0.3°
C26C31C32C236.2°0.0°
C26C31C32C30179.1°179.7°
C31C26C25H5178.9°179.8°
C26C31C30H21177.7°179.9°
C26C31C32H22173.8°179.9°
C29C30C31C32176.8°179.9°
C29C30C31H21180.0°179.8°
C23C21O22N04177.6°180.0°
C21C23C32C31179.5°179.9°
C23C21N04C03179.2°5.9°
C23C21N04C057.9°174.2°
C21C23C24H202.2°0.0°
C21C23C32H220.5°0.0°
C32C23C21O2246.4°42.2°
C32C23C21N04131.2°137.8°
C23C32C31H22180.0°179.9°
C23C32C31C30174.7°179.7°
C32C23C24H20177.1°179.7°
O22C21N04C031.5°174.1°
O22C21N04C05169.8°5.8°
C21N04C03C05172.3°179.9°
C21N04C03C02106.2°124.7°
C21N04C05C06114.5°124.7°
C21N04C03H13133.4°5.0°
C21N04C03H1414.3°115.5°
C21N04C05H155.0°5.0°
C21N04C05H16125.9°115.5°
C32C31C30H213.2°0.2°
C31C30C29H1176.3°179.7°
C30C31C32H225.3°0.4°
N04C03C02H13120.4°119.8°
N04C03C02H14120.5°120.0°
C03N04C05C0657.4°55.2°
N04C03C02N0762.4°49.4°
N04C03C02C0161.9°70.3°
N04C03C02H12175.5°169.2°
N04C03H13H14118.6°120.6°
C03N04C05H15176.9°175.0°
C03N04C05H1662.2°64.6°
C05N04C03C0266.1°55.2°
N04C05C06H15119.6°119.7°
N04C05C06H16119.5°119.7°
N04C05C06N0756.6°49.5°
C05N04C03H1354.3°175.0°
C05N04C03H14173.4°64.6°
N04C05H15H16121.4°120.4°
N04C05C06H1763.5°70.4°
N04C05C06H18176.7°169.2°
C03C02N07C01124.4°119.8°
C03C02N07H12112.9°119.9°
C03C02C01H12122.0°120.5°
C03C02N07C0662.4°55.3°
C03C02N07S08143.6°124.8°
C03C02C01H9180.0°179.2°
C03C02C01H1060.0°60.9°
C03C02C01H1160.0°59.1°
C02C03H13H14118.6°120.3°
C05C06N07C0263.9°55.3°
C05C06N07H17120.1°119.8°
C05C06N07H18120.1°119.7°
C05C06N07S08142.8°124.7°
C06C05H15H16121.3°120.5°
C05C06H17H18119.6°120.4°
N07C02C01H12122.4°120.4°
C02N07C06S08153.3°180.0°
C02N07S08O0954.9°23.5°
C02N07S08O10178.6°156.5°
C02N07S08C1160.6°90.0°
N07C02C01H964.5°60.0°
N07C02C01H10175.5°180.0°
N07C02C01H1155.5°60.0°
N07C02C03H1358.0°169.2°
N07C02C03H14177.1°70.5°
C02N07C06H1756.2°64.5°
C02N07C06H18175.9°175.0°
C01C02N07C0662.0°64.5°
C01C02N07S0892.0°115.5°
C02C01H9H10120.0°120.0°
C02C01H9H11120.0°120.0°
C02C01H10H11120.0°120.0°
C01C02C03H13177.7°49.4°
C01C02C03H1458.6°169.7°
C06N07S08O09154.2°156.5°
C06N07S08O1027.6°23.5°
C06N07S08C1190.4°90.0°
C06N07C02H12175.3°175.1°
N07C06C05H15176.1°169.2°
N07C06C05H1662.9°70.3°
N07C06H17H18119.6°120.4°
N07S08O09O10122.5°123.0°
N07S08O09C11115.3°114.1°
N07S08O10C11116.7°114.1°
N07S08C11C12101.4°90.0°
N07S08C11C2069.8°89.7°
S08N07C02H1230.7°4.9°
S08N07C06H1797.1°115.5°
S08N07C06H1822.6°5.0°
O09S08O10C11121.2°123.0°
O09S08C11C1214.6°156.5°
O09S08C11C20174.2°23.8°
O10S08C11C12140.7°23.5°
O10S08C11C2048.0°156.7°
S08C11C12C20171.3°179.8°
S08C11C12C13173.2°179.7°
S08C11C20C19172.5°179.7°
S08C11C20H67.5°0.2°
S08C11C12H76.8°0.2°
C11C12C13H7180.0°180.0°
C12C11C20C191.4°0.0°
C11C12C13C141.5°0.0°
C12C11C20H6178.6°180.0°
C11C12C13H8178.5°179.9°
C20C11C12C131.9°0.0°
C11C20C19H6180.0°180.0°
C11C20C19C140.5°0.0°
C11C20C19O18178.8°180.0°
C20C11C12H7178.1°180.0°
C12C13C14H8180.0°179.9°
C12C13C14C190.6°0.1°
C12C13C14N15177.1°180.0°
C20C19C14C130.1°0.1°
C20C19C14O18179.4°179.9°
C20C19C14N15178.1°180.0°
C20C19O18C16179.2°180.0°
C13C14C19N15178.2°179.9°
C13C14C19O18179.3°180.0°
C13C14N15C16179.4°180.0°
C14C13C12H7178.5°179.9°
C13C14N15H190.6°0.1°
C14C19O18C161.5°0.0°
C19C14N15C162.6°0.0°
C14C19C20H6179.5°179.9°
C19C14C13H8179.4°180.0°
C19C14N15H19177.4°180.0°
O18C19C14N152.5°0.0°
C19O18C16N150.1°0.0°
C19O18C16O17177.6°179.9°
O18C19C20H61.2°0.0°
C14N15C16O181.7°0.0°
C14N15C16H19180.0°179.9°
C14N15C16O17178.9°180.0°
N15C14C13H82.9°0.1°
O18C16N15O17177.2°179.9°
O18C16N15H19178.3°180.0°
O17C16N15H191.1°0.1°
H1C29C30H213.7°0.0°
H2C28H3H4120.0°120.0°
H5C25C24H200.6°0.1°
H7C12C13H81.5°0.1°
H9C01H10H11120.0°120.0°
H9C01C02H1258.0°60.3°
H10C01C02H1262.1°59.6°
H11C01C02H12178.0°179.6°
H12C02C03H1355.1°71.0°
H12C02C03H1464.0°49.3°
H15C05C06H1756.0°49.3°
H15C05C06H1863.7°71.1°
H16C05C06H17177.0°169.9°
H16C05C06H1857.2°49.4°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon