SYS
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.45Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| CA | CB | sing | 1.53Å | 1.55Å | |
| CA | C | sing | 1.51Å | 1.48Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | SE | sing | 1.96Å | 2.02Å | |
| CB | HB | sing | 1.09Å | 1.10Å | |
| CB | HBA | sing | 1.09Å | 1.10Å | |
| C | O | doub | 1.21Å | 1.23Å | |
| C | OXT | sing | 1.34Å | 1.08Å | |
| SE | C4 | sing | 1.96Å | 1.92Å | |
| C4 | C5 | sing | 1.51Å | 1.54Å | |
| C5 | N2 | sing | 1.35Å | 1.47Å | |
| C5 | O3 | doub | 1.21Å | 1.22Å | |
| C4 | H6 | sing | 1.09Å | 1.10Å | |
| C4 | H7 | sing | 1.09Å | 1.10Å | |
| N2 | H8 | sing | 0.97Å | 1.00Å | |
| N2 | H9 | sing | 0.97Å | 1.00Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 109.5° | 111.0° |
| CA | N | H2 | 109.5° | 111.0° |
| N | CA | CB | 109.6° | 109.5° |
| N | CA | C | 114.2° | 109.5° |
| N | CA | HA | 105.3° | 109.4° |
| H | N | H2 | 109.5° | 111.0° |
| CB | CA | C | 106.8° | 109.5° |
| CB | CA | HA | 112.9° | 109.5° |
| CA | CB | SE | 117.8° | 109.5° |
| CA | CB | HB | 106.8° | 109.4° |
| CA | CB | HBA | 104.9° | 109.5° |
| C | CA | HA | 108.2° | 109.5° |
| CA | C | O | 120.7° | 120.0° |
| CA | C | OXT | 119.6° | 120.0° |
| SE | CB | HB | 106.8° | 109.5° |
| SE | CB | HBA | 104.9° | 109.5° |
| CB | SE | C4 | 143.5° | 101.0° |
| HB | CB | HBA | 116.2° | 109.5° |
| O | C | OXT | 119.7° | 120.0° |
| C | OXT | HXT | 109.5° | 117.0° |
| SE | C4 | C5 | 105.0° | 109.5° |
| SE | C4 | H6 | 111.0° | 109.5° |
| SE | C4 | H7 | 112.0° | 109.5° |
| C4 | C5 | N2 | 120.0° | 120.0° |
| C4 | C5 | O3 | 135.0° | 120.0° |
| C5 | C4 | H6 | 111.0° | 109.4° |
| C5 | C4 | H7 | 111.9° | 109.5° |
| N2 | C5 | O3 | 105.0° | 120.0° |
| C5 | N2 | H8 | 106.4° | 120.0° |
| C5 | N2 | H9 | 126.8° | 120.0° |
| H6 | C4 | H7 | 106.1° | 109.4° |
| H8 | N2 | H9 | 126.8° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 120.0° | 123.9° |
| N | CA | CB | C | 124.2° | 120.0° |
| N | CA | CB | HA | 117.0° | 120.0° |
| N | CA | C | HA | 116.9° | 120.0° |
| N | CA | CB | SE | 166.9° | 65.0° |
| N | CA | CB | HB | 73.1° | 55.0° |
| N | CA | CB | HBA | 50.7° | 175.0° |
| N | CA | C | O | 40.9° | 20.0° |
| N | CA | C | OXT | 139.1° | 160.0° |
| H | N | CA | CB | 157.8° | 60.0° |
| H | N | CA | C | 38.0° | 60.0° |
| H | N | CA | HA | 80.5° | 180.0° |
| H2 | N | CA | CB | 37.7° | 63.9° |
| H2 | N | CA | C | 82.0° | 176.0° |
| H2 | N | CA | HA | 159.4° | 56.1° |
| CB | CA | C | HA | 121.8° | 120.0° |
| CA | CB | SE | HB | 120.0° | 120.0° |
| CA | CB | SE | HBA | 116.1° | 120.0° |
| CA | CB | HB | HBA | 116.6° | 120.0° |
| CB | CA | C | O | 80.4° | 100.0° |
| CB | CA | C | OXT | 99.6° | 80.0° |
| CA | CB | SE | C4 | 169.9° | 180.0° |
| C | CA | CB | SE | 42.6° | 175.0° |
| C | CA | CB | HB | 162.6° | 65.0° |
| C | CA | CB | HBA | 73.5° | 55.0° |
| CA | C | O | OXT | 180.0° | 180.0° |
| CA | C | OXT | HXT | 180.0° | 180.0° |
| HA | CA | CB | SE | 76.1° | 55.0° |
| HA | CA | CB | HB | 43.9° | 175.0° |
| HA | CA | CB | HBA | 167.8° | 65.0° |
| HA | CA | C | O | 157.8° | 140.0° |
| HA | CA | C | OXT | 22.2° | 40.0° |
| SE | CB | HB | HBA | 116.6° | 120.0° |
| CB | SE | C4 | C5 | 157.8° | 180.0° |
| CB | SE | C4 | H6 | 82.2° | 60.0° |
| CB | SE | C4 | H7 | 36.1° | 60.0° |
| HB | CB | SE | C4 | 70.0° | 60.1° |
| HBA | CB | SE | C4 | 53.8° | 60.0° |
| O | C | OXT | HXT | 0.0° | 0.1° |
| SE | C4 | C5 | H6 | 120.0° | 120.0° |
| SE | C4 | C5 | H7 | 121.7° | 120.0° |
| SE | C4 | C5 | N2 | 0.0° | 180.0° |
| SE | C4 | C5 | O3 | 180.0° | 0.0° |
| SE | C4 | H6 | H7 | 121.8° | 120.0° |
| C4 | C5 | N2 | O3 | 180.0° | 180.0° |
| C5 | C4 | H6 | H7 | 121.8° | 120.0° |
| C4 | C5 | N2 | H8 | 180.0° | 0.0° |
| C4 | C5 | N2 | H9 | 0.0° | 180.0° |
| N2 | C5 | C4 | H6 | 120.0° | 60.0° |
| N2 | C5 | C4 | H7 | 121.7° | 60.0° |
| C5 | N2 | H8 | H9 | 180.0° | 180.0° |
| O3 | C5 | C4 | H6 | 60.0° | 120.1° |
| O3 | C5 | C4 | H7 | 58.3° | 120.0° |
| O3 | C5 | N2 | H8 | 0.0° | 180.0° |
| O3 | C5 | N2 | H9 | 180.0° | 0.0° |
