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SY2

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C8O9doub1.22Å1.22Å
C6H6sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
C6H6Bsing1.09Å1.10Å
C5H5sing1.09Å1.10Å
C5H5Asing1.09Å1.10Å
C5H5Bsing1.09Å1.10Å
C4C6sing1.53Å1.58Å
C4C5sing1.53Å1.54Å
C4H4sing1.09Å1.10Å
O2C1doub1.21Å1.24Å
C1O35sing1.34Å1.35Å
C1C3sing1.51Å1.54Å
C3C4sing1.53Å1.58Å
C3H3sing1.09Å1.10Å
O35HO35sing0.97Å0.95Å
N7C8sing1.35Å1.38Å
N7C3sing1.47Å1.48Å
N7HN7sing0.97Å1.00Å
N36C8sing1.35Å1.38Å
N36C11sing1.46Å1.49Å
N36HN36sing0.97Å1.00Å
C11C15sing1.51Å1.49Å
C11H11sing1.09Å1.10Å
C15O16doub1.21Å1.21Å
C15N17sing1.35Å1.37Å
N17C18sing1.46Å1.46Å
N17HN17sing0.97Å1.00Å
C18C34sing1.53Å1.56Å
C18C19sing1.50Å1.53Å
C18H18sing1.10Å1.10Å
C34H34sing1.09Å1.10Å
C34H34Asing1.09Å1.10Å
C33C34sing1.53Å1.56Å
C33C32sing1.52Å1.57Å
C33H33sing1.09Å1.10Å
C33H33Asing1.10Å1.10Å
C32C31sing1.52Å1.56Å
C32H32sing1.09Å1.10Å
C32H32Asing1.09Å1.10Å
C31N30sing1.46Å1.46Å
C31H31sing1.09Å1.10Å
C31H31Asing1.09Å1.10Å
N30C28sing1.36Å1.38Å
N30HN30sing0.97Å1.00Å
C28O29doub1.22Å1.23Å
C27C28sing1.47Å1.53Å
C27C26doub1.33Å1.56Å
C22C26sing1.51Å1.56Å
C22C23sing1.53Å1.58Å
C22H22sing1.09Å1.10Å
C23C24sing1.53Å1.59Å
C23H23sing1.09Å1.10Å
C25C23sing1.53Å1.56Å
C25H25sing1.09Å1.10Å
C25H25Asing1.09Å1.10Å
C25H25Bsing1.09Å1.10Å
C24H24sing1.09Å1.10Å
C24H24Asing1.09Å1.10Å
C24H24Bsing1.09Å1.10Å
N21C22sing1.48Å1.46Å
N21HN21sing0.97Å1.00Å
C19N21sing1.36Å1.38Å
O20C19doub1.22Å1.25Å
C12C11sing1.53Å1.57Å
C12C13sing1.53Å1.54Å
C12H12sing1.09Å1.10Å
C14C12sing1.53Å1.54Å
C14H14sing1.09Å1.10Å
C14H14Asing1.09Å1.10Å
C14H14Bsing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
C13H13Bsing1.09Å1.10Å
C27H27sing1.08Å1.08Å
C26H26sing1.07Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O9C8N7118.3°120.0°
O9C8N36120.7°120.0°
H6C6H6A109.5°109.5°
H6C6H6B109.4°109.5°
H6C6C4109.5°109.5°
H6AC6H6B109.5°109.5°
H6AC6C4109.5°109.4°
H6BC6C4109.4°109.4°
H5C5H5A109.5°109.4°
H5C5H5B109.4°109.4°
H5C5C4109.5°109.5°
H5AC5H5B109.5°109.4°
H5AC5C4109.4°109.5°
H5BC5C4109.5°109.6°
C6C4C5109.1°109.4°
C6C4H4106.4°109.4°
C6C4C3114.0°109.5°
C5C4H4112.0°109.4°
C5C4C3108.6°109.5°
H4C4C3106.8°109.5°
O2C1O35122.3°120.0°
O2C1C3122.1°120.0°
O35C1C3115.6°119.9°
C1O35HO35109.5°117.0°
C1C3C4111.6°109.5°
C1C3H3109.7°109.5°
C1C3N7108.2°109.5°
C4C3H3106.0°109.5°
C4C3N7111.8°109.4°
H3C3N7109.5°109.5°
C8N7C3119.2°120.0°
C8N7HN7120.3°120.0°
N7C8N36120.9°120.0°
C3N7HN7120.4°120.0°
C8N36C11122.8°120.0°
C8N36HN36118.6°120.0°
C11N36HN36118.6°120.0°
N36C11C15111.0°109.5°
N36C11H11104.1°109.5°
N36C11C12114.6°109.5°
C15C11H11111.7°109.4°
C11C15O16119.1°120.0°
C11C15N17117.0°120.0°
C15C11C12107.6°109.5°
H11C11C12107.8°109.5°
O16C15N17123.8°120.0°
C15N17C18118.3°120.0°
C15N17HN17120.9°120.0°
C18N17HN17120.9°119.9°
N17C18C34109.7°109.8°
N17C18C19110.0°110.5°
N17C18H18109.4°108.2°
C34C18C19110.7°111.4°
C34C18H18108.7°108.5°
C18C34H34108.1°109.1°
C18C34H34A107.1°109.2°
C18C34C33113.8°111.9°
C19C18H18108.4°108.3°
C18C19N21116.3°121.9°
C18C19O20119.5°118.2°
H34C34H34A112.9°108.3°
H34C34C33108.0°109.1°
H34AC34C33107.1°109.1°
C34C33C32112.1°110.5°
C34C33H33108.6°110.2°
C34C33H33A108.0°108.7°
C32C33H33108.6°110.6°
C32C33H33A108.0°108.7°
C33C32C31112.6°112.8°
C33C32H32108.5°108.8°
C33C32H32A107.7°109.4°
H33C33H33A111.5°108.1°
C31C32H32108.5°108.7°
C31C32H32A107.8°108.9°
C32C31N30111.9°113.4°
C32C31H31108.7°108.7°
C32C31H31A108.1°108.9°
H32C32H32A111.9°108.1°
N30C31H31108.7°108.8°
N30C31H31A108.1°108.9°
C31N30C28126.0°119.7°
C31N30HN30117.0°120.4°
H31C31H31A111.4°108.0°
C28N30HN30117.0°120.0°
N30C28O29118.3°120.0°
N30C28C27125.5°119.8°
O29C28C27116.2°120.2°
C28C27C26113.7°121.6°
C28C27H27123.1°120.0°
C27C26C22110.7°117.4°
C26C27H27123.2°118.4°
C27C26H26124.7°122.2°
C26C22C23111.7°110.4°
C26C22H22109.4°109.4°
C26C22N21108.1°107.1°
C22C26H26124.6°120.3°
C23C22H22106.4°109.7°
C22C23C24113.2°109.5°
C22C23H23104.4°109.5°
C22C23C25112.3°109.5°
C23C22N21111.0°110.6°
H22C22N21110.1°109.5°
C24C23H23108.8°109.4°
C24C23C25108.3°109.5°
C23C24H24109.5°109.5°
C23C24H24A109.5°109.5°
C23C24H24B109.5°109.5°
H23C23C25109.7°109.5°
C23C25H25109.5°109.4°
C23C25H25A109.5°109.5°
C23C25H25B109.4°109.5°
H25C25H25A109.5°109.5°
H25C25H25B109.4°109.5°
H25AC25H25B109.5°109.5°
H24C24H24A109.4°109.5°
H24C24H24B109.5°109.4°
H24AC24H24B109.5°109.5°
C22N21HN21117.9°120.1°
C22N21C19124.3°117.9°
HN21N21C19117.9°122.0°
N21C19O20124.1°119.9°
C11C12C13111.8°109.5°
C11C12H12107.9°109.4°
C11C12C14109.0°109.5°
C13C12H12108.5°109.4°
C13C12C14108.5°109.5°
C12C13H13109.5°109.5°
C12C13H13A109.5°109.5°
C12C13H13B109.4°109.4°
H12C12C14111.2°109.5°
C12C14H14109.5°109.5°
C12C14H14A109.5°109.5°
C12C14H14B109.4°109.5°
H14C14H14A109.5°109.5°
H14C14H14B109.4°109.5°
H14AC14H14B109.5°109.4°
H13C13H13A109.5°109.4°
H13C13H13B109.5°109.5°
H13AC13H13B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O9C8N7N36179.9°179.7°
O9C8N7C30.1°0.0°
O9C8N7HN7179.9°180.0°
O9C8N36C110.1°0.0°
O9C8N36HN36179.9°180.0°
H6C6H6AH6B120.0°120.0°
H6C6H6AC4120.0°120.0°
H6C6H6BC4120.0°120.1°
H6C6C4C533.3°60.0°
H6C6C4H4154.3°60.0°
H6C6C4C388.3°180.0°
H6AC6H6BC4120.0°119.9°
H6AC6C4C586.7°180.0°
H6AC6C4H434.2°60.1°
H6AC6C4C3151.7°60.0°
H6BC6C4C5153.3°60.1°
H6BC6C4H485.8°180.0°
H6BC6C4C331.6°60.0°
H5C5H5AH5B120.0°119.9°
H5C5H5AC4120.0°120.0°
H5C5H5BC4120.0°120.0°
H5C5C4C673.6°60.0°
H5C5C4H4169.0°180.0°
H5C5C4C351.3°60.0°
H5AC5H5BC4120.0°120.1°
H5AC5C4C6166.4°180.0°
H5AC5C4H449.0°60.1°
H5AC5C4C368.7°60.0°
H5BC5C4C646.4°60.0°
H5BC5C4H471.0°60.0°
H5BC5C4C3171.3°180.0°
C6C4C5H4117.5°119.9°
C6C4C5C3124.8°120.0°
C6C4H4C3122.1°120.0°
C6C4C3C158.7°60.0°
C6C4C3H360.7°60.0°
C6C4C3N7180.0°180.0°
C5C4H4C3118.8°120.1°
C5C4C3C1179.5°180.0°
C5C4C3H361.1°60.0°
C5C4C3N758.1°60.0°
H4C4C3C158.5°59.9°
H4C4C3H3177.9°180.0°
H4C4C3N762.9°60.0°
O2C1O35C3179.6°180.0°
O2C1C3C485.7°120.0°
O2C1C3H3157.2°120.0°
O2C1O35HO350.0°0.1°
O2C1C3N737.8°0.0°
O35C1C3C494.7°60.1°
O35C1C3H322.4°60.0°
O35C1C3N7141.8°180.0°
C1C3C4H3119.4°120.1°
C1C3C4N7121.4°120.0°
C1C3H3N7118.7°120.0°
C3C1O35HO35179.6°180.0°
C1C3N7C899.2°155.0°
C1C3N7HN780.8°25.0°
C4C3H3N7120.8°120.0°
C4C3N7C8137.5°85.0°
C4C3N7HN742.5°95.0°
H3C3N7C820.4°35.0°
H3C3N7HN7159.6°145.0°
C8N7C3HN7180.0°179.9°
N7C8N36C11180.0°179.7°
N7C8N36HN360.0°0.3°
C3N7C8N36180.0°179.7°
HN7N7C8N360.1°0.3°
C8N36C11HN36180.0°180.0°
C8N36C11C1559.2°155.0°
C8N36C11H1161.1°35.1°
C8N36C11C12178.6°85.0°
N36C11C15H11115.7°120.0°
N36C11C15C12126.2°120.1°
N36C11H11C12122.2°120.1°
N36C11C15O1637.4°29.4°
N36C11C15N17143.0°150.7°
N36C11C12C1360.7°56.5°
N36C11C12H12179.8°63.4°
N36C11C12C1459.3°176.5°
HN36N36C11C15120.8°25.0°
HN36N36C11H11118.9°144.9°
HN36N36C11C121.4°95.0°
C15C11H11C12118.0°120.0°
C11C15O16N17179.6°180.0°
C11C15N17C18178.5°175.0°
C11C15N17HN171.5°4.9°
C15C11C12C1363.3°176.5°
C15C11C12H1255.8°56.6°
C15C11C12C14176.7°63.4°
H11C11C15O16153.1°149.4°
H11C11C15N1727.3°30.7°
H11C11C12C13176.1°63.6°
H11C11C12H1264.7°176.5°
H11C11C12C1456.2°56.5°
O16C15N17C181.1°5.1°
O16C15N17HN17178.9°175.1°
O16C15C11C1288.8°90.7°
C15N17C18HN17180.0°179.9°
C15N17C18C34114.4°155.0°
C15N17C18C19123.6°81.7°
C15N17C18H184.7°36.7°
N17C15C11C1290.8°89.3°
N17C18C34C19121.5°122.8°
N17C18C34H18119.6°118.1°
N17C18C19H18119.6°118.4°
N17C18C34H34159.8°147.0°
N17C18C34H34A78.3°28.8°
N17C18C34C3339.8°92.1°
N17C18C19N21177.1°9.4°
N17C18C19O201.8°172.3°
HN17N17C18C3465.6°24.9°
HN17N17C18C1956.4°98.4°
HN17N17C18H18175.3°143.2°
C34C18C19H18119.1°119.2°
C18C34H34H34A118.3°118.7°
C18C34H34C33123.5°122.6°
C18C34H34AC33122.4°122.6°
C18C34C33C32152.6°74.7°
C18C34C33H3387.4°47.8°
C18C34C33H33A33.7°166.1°
C34C18C19N2161.5°131.8°
C34C18C19O20119.5°49.9°
C19C18C34H3438.3°90.2°
C19C18C34H34A160.2°151.6°
C19C18C34C3381.7°30.7°
C18C19N21C22178.9°171.1°
C18C19N21HN211.0°9.5°
C18C19N21O20178.9°178.3°
H18C18C34H3480.6°28.9°
H18C18C34H34A41.2°89.2°
H18C18C34C33159.4°149.8°
H18C18C19N2157.6°108.9°
H18C18C19O20121.4°69.4°
H34C34H34AC33118.8°118.7°
H34C34C33C3232.6°164.4°
H34C34C33H33152.6°73.1°
H34C34C33H33A86.3°45.2°
H34AC34C33C3289.3°46.2°
H34AC34C33H3330.8°168.7°
H34AC34C33H33A151.9°73.0°
C34C33C32H33120.0°122.3°
C34C33C32H33A118.9°119.2°
C34C33H33H33A118.9°118.6°
C34C33C32C3169.8°178.1°
C34C33C32H3250.3°57.4°
C34C33C32H32A171.6°60.5°
C32C33H33H33A118.9°118.9°
C33C32C31H32120.0°120.8°
C33C32C31H32A118.7°121.7°
C33C32H32H32A118.7°118.8°
C33C32C31N3089.9°14.8°
C33C32C31H31150.0°106.4°
C33C32C31H31A29.0°136.2°
H33C33C32C31170.2°59.6°
H33C33C32H3269.7°179.7°
H33C33C32H32A51.6°61.8°
H33AC33C32C3149.1°59.0°
H33AC33C32H32169.1°61.8°
H33AC33C32H32A69.5°179.7°
C31C32H32H32A118.7°118.0°
C32C31N30H31120.0°121.1°
C32C31N30H31A119.0°121.4°
C32C31H31H31A119.0°118.0°
C32C31N30C28137.2°65.3°
C32C31N30HN3042.8°114.7°
H32C32C31N3030.1°135.6°
H32C32C31H3189.9°14.4°
H32C32C31H31A149.0°103.0°
H32AC32C31N30151.4°106.9°
H32AC32C31H3131.4°131.9°
H32AC32C31H31A89.6°14.5°
N30C31H31H31A119.0°118.1°
C31N30C28HN30180.0°180.0°
C31N30C28O29179.4°174.3°
C31N30C28C270.2°6.4°
H31C31N30C28102.8°173.6°
H31C31N30HN3077.2°6.4°
H31AC31N30C2818.3°56.1°
H31AC31N30HN30161.7°123.9°
N30C28O29C27179.6°179.3°
N30C28C27C26143.6°165.8°
N30C28C27H2736.4°15.1°
HN30N30C28O290.6°5.7°
HN30N30C28C27179.8°173.6°
O29C28C27C2636.8°13.5°
O29C28C27H27143.2°165.6°
C28C27C26H27180.0°179.1°
C28C27C26C22102.9°170.5°
C28C27C26H2677.0°5.3°
C27C26C22H26180.0°175.9°
C27C26C22C23177.8°164.7°
C27C26C22H2264.6°74.5°
C27C26C22N2155.4°44.2°
C26C22C23H22119.4°120.7°
C26C22C23N21120.8°118.4°
C26C22H22N21118.7°117.1°
C26C22C23C2477.6°178.0°
C26C22C23H2340.6°58.1°
C26C22C23C25159.4°61.9°
C26C22N21HN2142.2°138.0°
C26C22N21C19137.8°42.5°
C22C26C27H2777.1°10.4°
C23C22H22N21120.4°121.6°
C22C23C24H23115.6°120.0°
C22C23C24C25125.3°120.0°
C22C23H23C25120.6°120.0°
C22C23C25H2560.8°63.4°
C22C23C25H25A179.2°176.7°
C22C23C25H25B59.2°56.6°
C22C23C24H24113.2°60.0°
C22C23C24H24A126.8°180.0°
C22C23C24H24B6.8°60.0°
C23C22N21HN2180.7°101.6°
C23C22N21C1999.3°77.9°
C23C22C26H262.2°11.2°
H22C22C23C24163.1°61.3°
H22C22C23H2378.8°178.8°
H22C22C23C2540.0°58.8°
H22C22N21HN21161.7°19.4°
H22C22N21C1918.3°161.1°
H22C22C26H26115.4°109.6°
C24C23H23C25118.3°120.0°
C24C23C25H2565.0°56.7°
C24C23C25H25A55.0°63.3°
C24C23C25H25B175.0°176.7°
C23C24H24H24A120.0°120.1°
C23C24H24H24B120.0°120.0°
C23C24H24AH24B120.0°120.0°
C24C23C22N2143.2°59.6°
H23C23C25H25176.4°176.6°
H23C23C25H25A63.6°56.7°
H23C23C25H25B56.4°63.4°
H23C23C24H242.4°60.0°
H23C23C24H24A117.6°60.0°
H23C23C24H24B122.4°180.0°
H23C23C22N21161.4°60.3°
C23C25H25H25A120.0°120.0°
C23C25H25H25B120.0°120.0°
C23C25H25AH25B120.0°120.0°
C25C23C24H24121.5°180.0°
C25C23C24H24A1.5°60.0°
C25C23C24H24B118.5°60.1°
C25C23C22N2179.9°179.7°
H25C25H25AH25B120.0°120.0°
H24C24H24AH24B120.0°120.0°
C22N21HN21C19180.0°179.5°
C22N21C19O200.0°10.6°
N21C22C26H26124.6°131.7°
HN21N21C19O20179.9°168.9°
C11C12C13H12118.8°119.9°
C11C12C13C14120.2°120.0°
C11C12H12C14119.5°120.0°
C11C12C14H1426.3°63.2°
C11C12C14H14A146.3°176.9°
C11C12C14H14B93.7°56.9°
C11C12C13H1374.9°60.0°
C11C12C13H13A165.1°179.9°
C11C12C13H13B45.1°60.1°
C13C12H12C14119.2°120.0°
C13C12C14H1495.6°56.9°
C13C12C14H14A24.4°63.1°
C13C12C14H14B144.4°176.9°
C12C13H13H13A120.0°120.0°
C12C13H13H13B120.0°120.0°
C12C13H13AH13B120.0°120.0°
H12C12C14H14145.2°176.9°
H12C12C14H14A94.8°56.9°
H12C12C14H14B25.2°63.1°
H12C12C13H1344.0°60.0°
H12C12C13H13A76.0°60.0°
H12C12C13H13B164.0°NaN°
C12C14H14H14A120.0°120.0°
C12C14H14H14B120.0°120.0°
C12C14H14AH14B120.0°120.0°
C14C12C13H13164.9°180.0°
C14C12C13H13A44.9°60.0°
C14C12C13H13B75.1°60.0°
H14C14H14AH14B120.0°120.0°
H13C13H13AH13B120.0°120.0°
H27C27C26H26103.0°173.8°

222415

PDB entries from 2024-07-10

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