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SXO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
P24O25sing1.61Å1.57Å
O25HO25sing0.97Å0.95Å
O23P24doub1.48Å1.55Å
P24O27sing1.61Å1.57Å
P24O26sing1.61Å1.55Å
O26HO26sing0.97Å0.95Å
O27C28sing1.43Å1.46Å
C28H28Asing1.09Å1.10Å
C28C29sing1.53Å1.53Å
C28H28sing1.09Å1.10Å
C31C29sing1.53Å1.53Å
C29C32sing1.53Å1.57Å
C29C30sing1.53Å1.52Å
H30C30sing1.09Å1.10Å
C30H30Bsing1.09Å1.10Å
C30H30Asing1.09Å1.10Å
H31C31sing1.09Å1.10Å
H31AC31sing1.09Å1.10Å
C31H31Bsing1.09Å1.10Å
O33C32sing1.43Å1.43Å
C32C34sing1.51Å1.53Å
C32H32sing1.09Å1.10Å
HO33O33sing0.97Å0.95Å
O35C34doub1.21Å1.23Å
C34N36sing1.35Å1.32Å
N36C37sing1.46Å1.46Å
N36HN36sing0.97Å1.00Å
H37C37sing1.09Å1.10Å
C37H37Asing1.09Å1.10Å
C37C38sing1.53Å1.52Å
C39C38sing1.51Å1.52Å
C38H38Asing1.09Å1.10Å
C38H38sing1.09Å1.10Å
N41C39sing1.35Å1.32Å
C39O40doub1.21Å1.23Å
HN41N41sing0.97Å1.00Å
C42N41sing1.47Å1.46Å
C43C42sing1.53Å1.52Å
H42C42sing1.09Å1.10Å
C42H42Asing1.09Å1.10Å
S1C43sing1.81Å1.73Å
H43AC43sing1.09Å1.10Å
C43H43sing1.09Å1.10Å
C1S1sing1.71Å1.74Å
C2C1sing1.51Å1.52Å
C1O1doub1.21Å1.23Å
C3C2sing1.53Å1.53Å
H2C2sing1.09Å1.10Å
C2H2Asing1.09Å1.10Å
H3AC3sing1.09Å1.10Å
H3C3sing1.09Å1.10Å
C3C4sing1.53Å1.52Å
C5C4sing1.53Å1.52Å
C4H4sing1.09Å1.10Å
C4H4Asing1.09Å1.10Å
H5AC5sing1.09Å1.10Å
H5C5sing1.09Å1.10Å
C5C6sing1.53Å1.52Å
H6C6sing1.09Å1.10Å
C6C7sing1.53Å1.52Å
C6H6Asing1.09Å1.10Å
C8C7sing1.53Å1.51Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
H8AC8sing1.09Å1.10Å
H8C8sing1.09Å1.10Å
C8H8Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
P24O25HO25109.5°114.0°
O25P24O23108.3°109.5°
O25P24O27104.3°109.5°
O25P24O26108.2°109.5°
O23P24O27107.6°109.4°
O23P24O26119.1°109.5°
O27P24O26108.4°109.5°
P24O27C28118.5°123.0°
P24O26HO26109.5°114.0°
O27C28H28A109.0°109.5°
O27C28C29110.8°109.5°
O27C28H28108.7°109.5°
H28AC28C29109.0°109.5°
H28AC28H28110.6°109.5°
C29C28H28108.7°109.4°
C28C29C31109.7°109.5°
C28C29C32110.5°109.5°
C28C29C30106.7°109.5°
C31C29C32109.5°109.5°
C31C29C30109.7°109.4°
C29C31H31109.5°109.5°
C29C31H31A109.4°109.5°
C29C31H31B109.4°109.4°
C32C29C30110.7°109.5°
C29C32O33110.4°109.5°
C29C32C34111.0°109.5°
C29C32H32107.3°109.5°
C29C30H30109.5°109.5°
C29C30H30B109.4°109.5°
C29C30H30A109.4°109.5°
H30C30H30B109.5°109.5°
H30C30H30A109.4°109.5°
H30BC30H30A109.5°109.4°
H31C31H31A109.5°109.5°
H31C31H31B109.5°109.5°
H31AC31H31B109.5°109.5°
O33C32C34107.9°109.5°
O33C32H32110.4°109.5°
C32O33HO33109.5°114.0°
C34C32H32109.8°109.5°
C32C34O35120.2°120.0°
C32C34N36117.2°120.0°
O35C34N36122.6°120.0°
C34N36C37123.2°120.0°
C34N36HN36118.4°120.0°
C37N36HN36118.4°120.0°
N36C37H37108.6°109.5°
N36C37H37A108.1°109.5°
N36C37C38112.0°109.5°
H37C37H37A111.5°109.5°
H37C37C38108.6°109.4°
H37AC37C38108.0°109.4°
C37C38C39112.8°109.5°
C37C38H38A108.4°109.4°
C37C38H38107.7°109.5°
C39C38H38A108.4°109.5°
C39C38H38107.6°109.4°
C38C39N41114.2°120.0°
C38C39O40121.7°120.0°
H38AC38H38112.1°109.5°
N41C39O40124.1°120.0°
C39N41HN41117.8°120.1°
C39N41C42124.5°120.0°
HN41N41C42117.7°120.0°
N41C42C43110.8°109.4°
N41C42H42109.0°109.5°
N41C42H42A108.7°109.4°
C43C42H42109.0°109.5°
C43C42H42A108.7°109.5°
C42C43S1109.9°109.4°
C42C43H43A109.4°109.5°
C42C43H43109.3°109.5°
H42C42H42A110.5°109.5°
S1C43H43A109.3°109.4°
S1C43H43109.2°109.4°
C43S1C198.2°100.0°
H43AC43H43109.8°109.5°
S1C1C2114.1°120.1°
S1C1O1124.2°120.0°
C2C1O1121.7°120.0°
C1C2C3114.1°109.5°
C1C2H2108.0°109.5°
C1C2H2A106.9°109.4°
C3C2H2107.9°109.5°
C3C2H2A106.9°109.5°
C2C3H3A108.6°109.5°
C2C3H3108.0°109.5°
C2C3C4112.1°109.5°
H2C2H2A113.1°109.4°
H3AC3H3111.5°109.5°
H3AC3C4108.6°109.5°
H3C3C4108.0°109.5°
C3C4C5111.3°109.5°
C3C4H4108.8°109.5°
C3C4H4A108.4°109.5°
C5C4H4108.9°109.4°
C5C4H4A108.5°109.4°
C4C5H5A108.9°109.4°
C4C5H5108.5°109.5°
C4C5C6111.3°109.5°
H4C4H4A110.9°109.4°
H5AC5H5110.9°109.5°
H5AC5C6108.9°109.5°
H5C5C6108.4°109.5°
C5C6H6108.6°109.5°
C5C6C7111.9°109.5°
C5C6H6A108.1°109.5°
H6C6C7108.7°109.4°
H6C6H6A111.4°109.5°
C7C6H6A108.1°109.5°
C6C7C8110.7°109.5°
C6C7H7109.1°109.5°
C6C7H7A108.8°109.5°
C8C7H7109.1°109.5°
C8C7H7A108.8°109.5°
C7C8H8A109.5°109.4°
C7C8H8109.5°109.5°
C7C8H8B109.5°109.5°
H7C7H7A110.4°109.4°
H8AC8H8109.5°109.5°
H8AC8H8B109.5°109.5°
H8C8H8B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O25P24O23O27112.2°120.0°
O25P24O23O26124.1°120.0°
O25P24O27O26115.1°120.0°
O25P24O26HO26100.8°60.0°
O25P24O27C2859.0°64.9°
HO25O25P24O23178.5°180.0°
HO25O25P24O2767.2°60.0°
HO25O25P24O2648.1°60.0°
O23P24O27O26130.0°120.0°
O23P24O26HO2623.4°60.0°
O23P24O27C28173.9°55.0°
O27P24O26HO26146.7°180.0°
P24O27C28H28A64.9°60.0°
P24O27C28C29175.1°180.0°
P24O27C28H2855.7°60.1°
O26P24O27C2856.0°175.0°
O27C28H28AC29121.1°120.0°
O27C28H28AH28119.5°120.1°
O27C28C29H28119.5°120.0°
O27C28C29C3149.9°59.9°
O27C28C29C3270.9°180.0°
O27C28C29C30168.6°60.0°
H28AC28C29H28120.6°120.0°
H28AC28C29C31169.9°180.0°
H28AC28C29C3249.1°60.0°
H28AC28C29C3071.4°60.0°
C28C29C31C32121.5°120.0°
C28C29C31C30116.8°120.0°
C28C29C32C30118.0°120.0°
C28C29C30H30117.4°174.7°
C28C29C30H30B2.6°65.3°
C28C29C30H30A122.6°54.6°
C28C29C31H31147.2°172.9°
C28C29C31H31A27.2°67.1°
C28C29C31H31B92.8°52.9°
C28C29C32O3352.6°65.3°
C28C29C32C34172.2°54.6°
C28C29C32H3267.8°174.6°
H28C28C29C3169.5°60.0°
H28C28C29C32169.6°60.0°
H28C28C29C3049.2°180.0°
C31C29C32C30121.1°120.0°
C31C29C30H30123.9°65.3°
C31C29C30H30B116.1°54.7°
C31C29C30H30A3.9°174.6°
C29C31H31H31A120.0°120.0°
C29C31H31H31B120.0°119.9°
C29C31H31AH31B120.0°120.0°
C31C29C32O3368.4°174.6°
C31C29C32C3451.2°65.4°
C31C29C32H32171.2°54.6°
C32C29C30H302.9°54.7°
C32C29C30H30B122.9°174.7°
C32C29C30H30A117.1°65.4°
C32C29C31H3191.4°52.8°
C32C29C31H31A148.7°172.9°
C32C29C31H31B28.7°67.1°
C29C32O33C34121.5°120.0°
C29C32O33H32118.5°120.0°
C29C32C34H32118.5°120.0°
C29C32O33HO3385.6°60.0°
C29C32C34O35103.7°106.1°
C29C32C34N3677.0°73.9°
C29C30H30H30B120.0°120.0°
C29C30H30H30A120.0°120.0°
C29C30H30BH30A120.0°120.0°
C30C29C31H3130.3°67.1°
C30C29C31H31A89.6°52.9°
C30C29C31H31B150.4°172.9°
C30C29C32O33170.6°54.7°
C30C29C32C3469.8°174.6°
C30C29C32H3250.2°65.4°
H30C30H30BH30A120.0°120.0°
H31C31H31AH31B120.1°120.0°
O33C32C34H32120.4°120.1°
O33C32C34O3517.4°13.8°
O33C32C34N36161.9°166.2°
C34C32O33HO3335.8°60.0°
C32C34O35N36179.2°180.0°
C32C34N36C37179.7°175.1°
C32C34N36HN360.3°4.9°
H32C32O33HO33155.9°180.0°
H32C32C34O35137.8°133.9°
H32C32C34N3641.4°46.1°
O35C34N36C370.5°4.9°
O35C34N36HN36179.5°175.1°
C34N36C37HN36180.0°180.0°
C34N36C37H3739.5°60.0°
C34N36C37H37A81.6°60.0°
C34N36C37C38159.5°180.0°
N36C37H37H37A119.0°120.0°
N36C37H37C38122.1°120.0°
N36C37H37AC38121.4°120.0°
N36C37C38C39129.8°180.0°
N36C37C38H38A110.2°60.0°
N36C37C38H3811.2°60.0°
HN36N36C37H37140.5°120.0°
HN36N36C37H37A98.4°120.0°
HN36N36C37C3820.5°0.0°
H37C37H37AC38119.3°119.9°
H37C37C38C399.8°60.0°
H37C37C38H38A129.8°60.1°
H37C37C38H38108.8°179.9°
H37AC37C38C39111.3°59.9°
H37AC37C38H38A8.7°180.0°
H37AC37C38H38130.2°60.0°
C37C38C39H38A120.0°120.0°
C37C38C39H38118.6°120.0°
C37C38H38AH38118.7°120.0°
C37C38C39N4144.2°180.0°
C37C38C39O40136.1°0.0°
C39C38H38AH38118.6°120.0°
C38C39N41O40179.7°179.9°
C38C39N41HN410.0°0.1°
C38C39N41C42180.0°180.0°
H38AC38C39N41164.2°60.0°
H38AC38C39O4016.1°120.0°
H38C38C39N4174.4°60.1°
H38C38C39O40105.3°120.0°
C39N41HN41C42180.0°180.0°
C39N41C42C43146.3°180.0°
C39N41C42H4293.7°60.0°
C39N41C42H42A26.9°60.0°
O40C39N41HN41179.7°180.0°
O40C39N41C420.3°0.0°
HN41N41C42C4333.7°0.0°
HN41N41C42H4286.3°120.0°
HN41N41C42H42A153.1°120.0°
N41C42C43H42120.0°120.0°
N41C42C43H42A119.4°119.9°
N41C42H42H42A119.5°120.0°
N41C42C43S155.1°180.0°
N41C42C43H43A175.1°60.1°
N41C42C43H4364.7°60.0°
C43C42H42H42A119.4°120.1°
C42C43S1H43A120.0°120.0°
C42C43S1H43119.8°120.0°
C42C43H43AH43119.9°120.1°
C42C43S1C1167.3°180.0°
H42C42C43S164.9°60.0°
H42C42C43H43A55.1°59.9°
H42C42C43H43175.3°180.0°
H42AC42C43S1174.5°60.0°
H42AC42C43H43A65.5°180.0°
H42AC42C43H4354.7°59.9°
S1C43H43AH43119.8°120.0°
C43S1C1C2173.5°180.0°
C43S1C1O14.8°0.0°
H43AC43S1C172.7°60.0°
H43C43S1C147.5°60.0°
S1C1C2O1178.3°179.9°
S1C1C2C3126.3°180.0°
S1C1C2H2113.7°59.9°
S1C1C2H2A8.3°60.0°
C1C2C3H2120.0°120.1°
C1C2C3H2A118.0°120.0°
C1C2H2H2A118.1°119.9°
C1C2C3H3A169.8°60.0°
C1C2C3H348.6°60.0°
C1C2C3C470.3°180.0°
O1C1C2C355.4°0.1°
O1C1C2H264.6°120.0°
O1C1C2H2A173.4°120.1°
C3C2H2H2A118.1°120.0°
C2C3H3AH3119.0°120.0°
C2C3H3AC4122.1°120.0°
C2C3H3C4121.4°120.0°
C2C3C4C5169.1°180.0°
C2C3C4H470.9°60.0°
C2C3C4H4A49.8°60.0°
H2C2C3H3A70.2°60.0°
H2C2C3H3168.6°179.9°
H2C2C3C449.8°60.0°
H2AC2C3H3A51.8°180.0°
H2AC2C3H369.4°60.0°
H2AC2C3C4171.8°60.0°
H3AC3H3C4119.3°120.0°
H3AC3C4C549.1°60.0°
H3AC3C4H4169.1°60.0°
H3AC3C4H4A70.2°180.0°
H3C3C4C572.1°60.0°
H3C3C4H448.0°180.0°
H3C3C4H4A168.7°60.0°
C3C4C5H4120.0°120.1°
C3C4C5H4A119.2°120.0°
C3C4H4H4A119.2°120.1°
C3C4C5H5A58.1°60.0°
C3C4C5H562.7°59.9°
C3C4C5C6178.1°180.0°
C5C4H4H4A119.3°119.9°
C4C5H5AH5119.3°119.9°
C4C5H5AC6121.5°120.0°
C4C5H5C6121.0°120.0°
C4C5C6H648.4°60.0°
C4C5C6C771.7°179.9°
C4C5C6H6A169.4°60.0°
H4C4C5H5A178.1°60.0°
H4C4C5H557.3°180.0°
H4C4C5C661.9°59.9°
H4AC4C5H5A61.1°180.0°
H4AC4C5H5178.1°60.1°
H4AC4C5C658.9°60.0°
H5AC5H5C6119.5°120.1°
H5AC5C6H671.7°59.9°
H5AC5C6C7168.3°60.0°
H5AC5C6H6A49.4°179.9°
H5C5C6H6167.6°180.0°
H5C5C6C747.6°60.0°
H5C5C6H6A71.3°60.0°
C5C6H6C7122.0°120.0°
C5C6H6H6A119.0°120.0°
C5C6C7H6A118.9°120.0°
C5C6C7C870.1°180.0°
C5C6C7H750.0°60.0°
C5C6C7H7A170.5°60.0°
H6C6C7H6A121.1°120.0°
H6C6C7C8169.9°60.0°
H6C6C7H770.0°180.0°
H6C6C7H7A50.5°60.0°
C6C7C8H7120.0°120.0°
C6C7C8H7A119.5°120.1°
C6C7H7H7A119.5°120.0°
C6C7C8H8A166.5°60.0°
C6C7C8H873.5°60.0°
C6C7C8H8B46.5°180.0°
H6AC6C7C848.9°60.0°
H6AC6C7H7168.9°60.0°
H6AC6C7H7A70.6°180.0°
C8C7H7H7A119.5°120.0°
C7C8H8AH8120.0°120.0°
C7C8H8AH8B120.0°120.0°
C7C8H8H8B120.0°120.0°
H7C7C8H8A46.5°60.0°
H7C7C8H8166.5°180.0°
H7C7C8H8B73.5°60.0°
H7AC7C8H8A74.0°180.0°
H7AC7C8H846.0°60.1°
H7AC7C8H8B166.0°60.0°
H8AC8H8H8B120.0°120.0°

222415

PDB entries from 2024-07-10

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