SVZ
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.44Å | 1.48Å | |
| CA | C | sing | 1.51Å | 1.54Å | |
| C | O | doub | 1.22Å | 1.22Å | |
| CA | CB | sing | 1.52Å | 1.53Å | |
| CB | OG | sing | 1.42Å | 1.43Å | |
| OG | P1 | sing | 1.63Å | 1.61Å | |
| O4 | P1 | doub | 1.51Å | 1.52Å | |
| P1 | O2 | sing | 1.63Å | 1.52Å | |
| P1 | N3 | sing | 1.66Å | 1.75Å | |
| N3 | C5 | sing | 1.46Å | 1.45Å | |
| C5 | C7 | sing | 1.52Å | 1.52Å | |
| C5 | C6 | sing | 1.52Å | 1.53Å | |
| C | OXT | sing | 1.36Å | 1.33Å | |
| N | HN1 | sing | 1.00Å | 1.02Å | |
| N | HN2 | sing | 1.01Å | 1.02Å | |
| CA | HA | sing | 1.09Å | 1.12Å | |
| CB | HBC1 | sing | 1.10Å | 1.12Å | |
| CB | HBC2 | sing | 1.10Å | 1.12Å | |
| OXT | HOT | sing | 0.98Å | 0.95Å | |
| O2 | H2 | sing | 0.98Å | 0.95Å | |
| N3 | H3 | sing | 1.02Å | 1.02Å | |
| C5 | H5 | sing | 1.10Å | 1.12Å | |
| C7 | H7C1 | sing | 1.09Å | 1.11Å | |
| C7 | H7C2 | sing | 1.10Å | 1.11Å | |
| C7 | H7C3 | sing | 1.10Å | 1.11Å | |
| C6 | H6C1 | sing | 1.10Å | 1.11Å | |
| C6 | H6C2 | sing | 1.09Å | 1.12Å | |
| C6 | H6C3 | sing | 1.10Å | 1.11Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N | CA | C | 111.8° | 107.3° |
| N | CA | CB | 111.5° | 111.7° |
| CA | N | HN1 | 111.3° | 119.0° |
| CA | N | HN2 | 111.8° | 118.9° |
| N | CA | HA | 107.7° | 105.3° |
| CA | C | O | 119.3° | 125.1° |
| C | CA | CB | 113.1° | 110.6° |
| CA | C | OXT | 119.3° | 111.9° |
| C | CA | HA | 105.9° | 110.0° |
| O | C | OXT | 121.5° | 122.9° |
| CA | CB | OG | 111.5° | 109.1° |
| CB | CA | HA | 106.3° | 111.7° |
| CA | CB | HBC1 | 111.4° | 111.0° |
| CA | CB | HBC2 | 111.5° | 111.6° |
| CB | OG | P1 | 108.8° | 120.3° |
| OG | CB | HBC1 | 111.5° | 107.8° |
| OG | CB | HBC2 | 111.5° | 108.7° |
| OG | P1 | O4 | 102.5° | 111.7° |
| OG | P1 | O2 | 135.8° | 102.0° |
| OG | P1 | N3 | 66.4° | 108.0° |
| O4 | P1 | O2 | 119.2° | 111.3° |
| O4 | P1 | N3 | 107.7° | 116.4° |
| O2 | P1 | N3 | 110.0° | 106.3° |
| P1 | O2 | H2 | 135.8° | 118.6° |
| P1 | N3 | C5 | 117.3° | 118.7° |
| P1 | N3 | H3 | 109.4° | 115.5° |
| N3 | C5 | C7 | 109.5° | 109.1° |
| N3 | C5 | C6 | 111.7° | 108.9° |
| C5 | N3 | H3 | 109.4° | 108.2° |
| N3 | C5 | H5 | 108.7° | 108.0° |
| C7 | C5 | C6 | 111.8° | 111.7° |
| C7 | C5 | H5 | 108.7° | 109.6° |
| C5 | C7 | H7C1 | 112.2° | 110.9° |
| C5 | C7 | H7C2 | 112.2° | 111.4° |
| C5 | C7 | H7C3 | 109.5° | 110.8° |
| C6 | C5 | H5 | 106.4° | 109.4° |
| C5 | C6 | H6C1 | 111.4° | 110.7° |
| C5 | C6 | H6C2 | 111.4° | 110.9° |
| C5 | C6 | H6C3 | 111.7° | 111.4° |
| C | OXT | HOT | 119.2° | 115.2° |
| HN1 | N | HN2 | 111.3° | 120.7° |
| HBC1 | CB | HBC2 | 98.9° | 108.5° |
| H7C1 | C7 | H7C2 | 98.2° | 108.1° |
| H7C1 | C7 | H7C3 | 112.2° | 108.0° |
| H7C2 | C7 | H7C3 | 112.2° | 107.5° |
| H6C1 | C6 | H6C2 | 99.0° | 108.1° |
| H6C1 | C6 | H6C3 | 111.4° | 107.5° |
| H6C2 | C6 | H6C3 | 111.3° | 108.2° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N | CA | C | CB | 126.9° | 122.0° |
| N | CA | C | HA | 117.1° | 114.1° |
| N | CA | C | O | 60.1° | 35.9° |
| N | CA | CB | HA | 117.1° | 117.7° |
| N | CA | CB | OG | 167.4° | 178.1° |
| N | CA | C | OXT | 119.1° | 146.4° |
| CA | N | HN1 | HN2 | 125.5° | 166.4° |
| N | CA | CB | HBC1 | 67.3° | 59.5° |
| N | CA | CB | HBC2 | 42.2° | 61.7° |
| CA | C | O | OXT | 179.2° | 177.5° |
| C | CA | CB | HA | 115.8° | 122.9° |
| C | CA | CB | OG | 65.5° | 58.7° |
| C | CA | N | HN1 | 54.7° | 7.2° |
| C | CA | N | HN2 | 180.0° | 159.5° |
| C | CA | CB | HBC1 | 59.8° | 59.9° |
| C | CA | CB | HBC2 | 169.2° | 178.9° |
| CA | C | OXT | HOT | 180.0° | 177.8° |
| O | C | CA | CB | 173.1° | 86.1° |
| O | C | CA | HA | 57.0° | 150.0° |
| O | C | OXT | HOT | 0.8° | 0.0° |
| CA | CB | OG | HBC1 | 125.3° | 120.7° |
| CA | CB | OG | HBC2 | 125.3° | 122.0° |
| CA | CB | OG | P1 | 151.6° | 180.0° |
| CB | CA | C | OXT | 7.7° | 91.6° |
| CB | CA | N | HN1 | 73.0° | 114.1° |
| CB | CA | N | HN2 | 52.2° | 79.2° |
| CA | CB | HBC1 | HBC2 | 117.3° | 123.0° |
| CB | OG | P1 | O4 | 66.5° | 170.7° |
| CB | OG | P1 | O2 | 94.4° | 51.8° |
| CB | OG | P1 | N3 | 170.6° | 60.0° |
| OG | CB | CA | HA | 50.3° | 64.2° |
| OG | CB | HBC1 | HBC2 | 117.4° | 117.5° |
| OG | P1 | O4 | O2 | 164.9° | 113.2° |
| OG | P1 | O4 | N3 | 68.9° | 124.8° |
| OG | P1 | O2 | N3 | 76.3° | 113.1° |
| OG | P1 | N3 | C5 | 118.6° | 66.6° |
| P1 | OG | CB | HBC1 | 26.4° | 59.3° |
| P1 | OG | CB | HBC2 | 83.1° | 58.0° |
| OG | P1 | O2 | H2 | 180.0° | 72.7° |
| OG | P1 | N3 | H3 | 6.7° | 162.3° |
| O4 | P1 | O2 | N3 | 125.1° | 127.7° |
| O4 | P1 | N3 | C5 | 145.2° | 60.0° |
| O4 | P1 | O2 | H2 | 21.4° | 46.5° |
| O4 | P1 | N3 | H3 | 89.5° | 71.1° |
| O2 | P1 | N3 | C5 | 13.8° | 175.4° |
| O2 | P1 | N3 | H3 | 139.1° | 53.5° |
| P1 | N3 | C5 | H3 | 125.3° | 134.2° |
| P1 | N3 | C5 | C7 | 112.3° | 89.0° |
| P1 | N3 | C5 | C6 | 123.3° | 148.7° |
| N3 | P1 | O2 | H2 | 103.7° | 174.2° |
| P1 | N3 | C5 | H5 | 6.3° | 30.0° |
| N3 | C5 | C7 | C6 | 124.4° | 120.5° |
| N3 | C5 | C7 | H5 | 118.6° | 118.0° |
| N3 | C5 | C6 | H5 | 118.5° | 117.8° |
| N3 | C5 | C7 | H7C1 | 54.7° | 179.1° |
| N3 | C5 | C7 | H7C2 | 54.7° | 60.5° |
| N3 | C5 | C7 | H7C3 | 180.0° | 59.1° |
| N3 | C5 | C6 | H6C1 | 54.7° | 58.9° |
| N3 | C5 | C6 | H6C2 | 54.8° | 178.9° |
| N3 | C5 | C6 | H6C3 | 180.0° | 60.6° |
| C7 | C5 | C6 | H5 | 118.4° | 121.5° |
| C7 | C5 | N3 | H3 | 122.4° | 45.2° |
| C5 | C7 | H7C1 | H7C2 | 118.1° | 122.4° |
| C5 | C7 | H7C1 | H7C3 | 123.8° | 121.6° |
| C5 | C7 | H7C2 | H7C3 | 123.8° | 121.5° |
| C7 | C5 | C6 | H6C1 | 177.8° | 179.5° |
| C7 | C5 | C6 | H6C2 | 68.4° | 60.5° |
| C7 | C5 | C6 | H6C3 | 56.9° | 60.0° |
| C6 | C5 | N3 | H3 | 1.9° | 77.0° |
| C6 | C5 | C7 | H7C1 | 69.6° | 60.4° |
| C6 | C5 | C7 | H7C2 | 179.1° | 60.1° |
| C6 | C5 | C7 | H7C3 | 55.6° | 179.6° |
| C5 | C6 | H6C1 | H6C2 | 117.3° | 121.6° |
| C5 | C6 | H6C1 | H6C3 | 125.5° | 121.8° |
| C5 | C6 | H6C2 | H6C3 | 125.5° | 122.4° |
| OXT | C | CA | HA | 123.8° | 32.3° |
| HN1 | N | CA | HA | 170.7° | 124.4° |
| HN2 | N | CA | HA | 64.0° | 42.3° |
| HA | CA | CB | HBC1 | 175.6° | 177.1° |
| HA | CA | CB | HBC2 | 75.0° | 56.0° |
| H3 | N3 | C5 | H5 | 119.0° | 164.2° |
| H5 | C5 | C7 | H7C1 | 173.3° | 61.1° |
| H5 | C5 | C7 | H7C2 | 63.9° | 178.5° |
| H5 | C5 | C7 | H7C3 | 61.4° | 58.9° |
| H5 | C5 | C6 | H6C1 | 63.7° | 58.9° |
| H5 | C5 | C6 | H6C2 | 173.2° | 61.0° |
| H5 | C5 | C6 | H6C3 | 61.5° | 178.4° |
| H7C1 | C7 | H7C2 | H7C3 | 118.1° | 116.4° |
| H6C1 | C6 | H6C2 | H6C3 | 117.3° | 116.1° |
