Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

SVV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NCAsing1.44Å1.48Å
CACsing1.51Å1.56Å
COdoub1.22Å1.25Å
CACBsing1.52Å1.53Å
CBOGsing1.42Å1.43Å
OGP1sing1.62Å1.61Å
O3P1sing1.62Å1.51Å
P1O2doub1.51Å1.49Å
P1N4sing1.65Å1.74Å
COXTsing1.36Å1.34Å
CBHBC1sing1.10Å1.11Å
CBHA2sing1.10Å1.12Å
O3H3sing0.98Å0.95Å
N4H4N1sing1.02Å1.02Å
N4H4N2sing1.02Å1.02Å
OXTHAsing0.98Å4.10Å
NHN1sing1.01Å1.00Å
NHN2sing1.01Å1.00Å
CAHCsing1.10Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NCAC112.3°107.3°
NCACB111.0°111.6°
CANHN1109.5°119.0°
CANHN2109.5°118.9°
NCAHC108.0°105.3°
CACO118.9°125.1°
CCACB113.8°110.6°
CACOXT118.6°111.9°
CCAHC104.9°110.0°
OCOXT122.5°122.9°
CACBOG111.3°109.2°
CACBHBC1111.6°111.0°
CACBHA2111.5°111.6°
CBCAHC106.3°111.7°
CBOGP1122.8°120.2°
OGCBHBC1111.5°107.8°
OGCBHA2111.6°108.7°
OGP1O3103.7°102.2°
OGP1O2123.9°111.6°
OGP1N494.3°107.7°
O3P1O2117.6°111.4°
O3P1N4109.7°106.5°
P1O3H3103.8°118.7°
O2P1N4104.7°116.4°
P1N4H4N1118.2°117.1°
P1N4H4N294.3°117.1°
COXTHA27.4°115.2°
HBC1CBHA298.8°108.4°
H4N1N4H4N2118.2°105.8°
HN1NHN2109.4°120.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NCACCB127.2°122.0°
NCACHC117.0°114.1°
NCACO66.0°35.9°
NCACBHC117.2°117.6°
NCACBOG162.6°178.2°
NCACOXT113.9°146.4°
NCACBHBC172.1°59.4°
NCACBHA237.3°61.6°
CANHN1HN2120.0°166.4°
CACOOXT179.9°177.5°
CCACBHC114.9°122.9°
CCACBOG69.5°58.8°
CCACBHBC155.8°60.0°
CCACBHA2165.2°178.9°
CACOXTHA52.7°177.7°
CCANHN145.7°58.8°
CCANHN2165.7°107.8°
OCCACB166.8°86.1°
OCOXTHA127.2°0.0°
OCCAHC51.1°150.0°
CACBOGHBC1125.3°120.7°
CACBOGHA2125.3°122.0°
CACBOGP1140.2°180.0°
CBCACOXT13.3°91.6°
CACBHBC1HA2117.4°122.9°
CBCANHN182.9°62.5°
CBCANHN237.1°130.8°
CBOGP1O334.1°51.9°
CBOGP1O2103.5°171.1°
CBOGP1N4145.7°60.0°
OGCBHBC1HA2117.4°117.5°
OGCBCAHC45.4°64.2°
OGP1O3O2140.8°119.3°
OGP1O3N499.8°112.9°
OGP1O2N4105.6°124.2°
P1OGCBHBC114.9°59.2°
P1OGCBHA294.5°58.1°
OGP1O3H3180.0°72.6°
OGP1N4H4N154.7°62.0°
OGP1N4H4N2180.0°170.8°
O3P1O2N4122.0°122.3°
O3P1N4H4N1161.0°170.9°
O3P1N4H4N273.7°61.9°
O2P1O3H339.2°46.6°
O2P1N4H4N172.0°64.2°
O2P1N4H4N253.3°63.0°
N4P1O3H380.2°174.5°
P1N4H4N1H4N2112.6°132.5°
OXTCCAHC129.0°32.3°
HBC1CBCAHC170.7°177.1°
HA2CBCAHC79.9°56.0°
HN1NCAHC160.9°176.0°
HN2NCAHC79.1°9.4°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon