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SV5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CC1doub1.38Å1.38ÅAromatic
CC5sing1.38Å1.38ÅAromatic
C1C2sing1.38Å1.39ÅAromatic
C5C4doub1.38Å1.39ÅAromatic
C2C3doub1.38Å1.39ÅAromatic
C4C3sing1.38Å1.39ÅAromatic
C3C6sing1.51Å1.51Å
C6Nsing1.47Å1.47Å
C7Nsing1.37Å1.38ÅAromatic
C7C8doub1.34Å1.37ÅAromatic
NC10sing1.36Å1.38ÅAromatic
C8C9sing1.46Å1.44ÅAromatic
C10C9doub1.40Å1.41ÅAromatic
C10C11sing1.41Å1.42Å
C9C13sing1.41Å1.45Å
C11C12doub1.35Å1.35Å
C13Odoub1.22Å1.23Å
C13N1sing1.35Å1.40Å
C12N1sing1.36Å1.36Å
C1H1sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C7H3sing1.08Å1.08Å
C8H4sing1.08Å1.08Å
C11H5sing1.08Å1.08Å
C12H7sing1.08Å1.08Å
C6H8sing1.09Å1.10Å
C6H9sing1.09Å1.10Å
C4H10sing1.08Å1.08Å
C5H11sing1.08Å1.08Å
CH12sing1.08Å1.08Å
N1H6sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1CC5119.7°120.0°
CC1C2120.2°120.0°
CC1H1119.9°120.0°
C1CH12120.1°120.0°
CC5C4120.2°120.0°
CC5H11119.9°120.0°
C5CH12120.1°119.9°
C1C2C3120.7°120.0°
C2C1H1119.9°120.0°
C1C2H2119.7°120.0°
C5C4C3120.7°120.0°
C5C4H10119.6°120.0°
C4C5H11119.9°120.0°
C2C3C4118.5°120.0°
C2C3C6121.4°120.0°
C3C2H2119.6°120.0°
C4C3C6120.1°120.0°
C3C4H10119.6°120.0°
C3C6N113.9°109.5°
C3C6H8108.4°109.4°
C3C6H9108.3°109.5°
C6NC7124.6°125.0°
C6NC10126.2°125.0°
NC6H8108.4°109.5°
NC6H9108.3°109.5°
NC7C8109.1°109.6°
C7NC10109.2°110.1°
NC7H3125.5°125.2°
C7C8C9107.6°106.8°
C8C7H3125.5°125.2°
C7C8H4126.2°126.6°
NC10C9107.5°107.4°
NC10C11132.6°134.0°
C8C9C10106.6°106.1°
C8C9C13132.6°134.6°
C9C8H4126.2°126.6°
C9C10C11119.9°118.6°
C10C9C13120.8°119.3°
C10C11C12119.0°119.8°
C10C11H5120.5°120.1°
C9C13O126.2°120.2°
C9C13N1114.3°119.5°
C11C12N1121.3°121.6°
C12C11H5120.5°120.2°
C11C12H7119.4°119.2°
OC13N1119.5°120.2°
C13N1C12124.7°121.2°
C13N1H6117.7°119.3°
N1C12H7119.3°119.2°
C12N1H6117.7°119.4°
H8C6H9109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1CC5H12180.0°179.5°
CC1C2H1180.0°179.7°
C1CC5C40.3°0.5°
CC1C2C30.0°0.3°
CC1C2H2179.9°179.8°
C1CC5H11179.7°179.7°
C5CC1C20.3°0.5°
CC5C4H11180.0°179.8°
CC5C4C30.1°0.3°
C5CC1H1179.8°179.8°
CC5C4H10179.9°179.7°
C1C2C3H2180.0°179.9°
C1C2C3C40.3°0.1°
C1C2C3C6180.0°180.0°
C2C1CH12179.7°180.0°
C5C4C3C20.2°0.1°
C5C4C3H10180.0°180.0°
C5C4C3C6180.0°180.0°
C4C5CH12179.7°180.0°
C2C3C4C6179.8°179.9°
C2C3C6N7.3°89.9°
C3C2C1H1179.9°180.0°
C2C3C6H8128.0°150.0°
C2C3C6H9113.3°30.1°
C2C3C4H10179.8°179.9°
C4C3C6N172.9°89.9°
C4C3C2H2179.7°180.0°
C4C3C6H852.3°30.1°
C4C3C6H966.5°150.0°
C3C4C5H11179.9°179.9°
C3C6NH8120.7°120.0°
C3C6NH9120.6°120.0°
C3C6NC7112.7°95.0°
C3C6NC1068.0°85.0°
C6C3C2H20.1°0.1°
C3C6H8H9118.0°119.9°
C6C3C4H100.0°0.0°
C6NC7C10179.4°180.0°
C6NC7C8179.9°180.0°
C6NC10C9179.9°180.0°
C6NC10C110.4°0.0°
C6NC7H30.1°0.3°
NC6H8H9118.0°120.0°
NC7C8H3180.0°179.7°
NC7C8C90.3°0.0°
C7NC10C90.5°0.0°
C7NC10C11179.8°180.0°
NC7C8H4179.7°180.0°
C7NC6H8126.6°145.0°
C7NC6H97.9°25.0°
C8C7NC100.5°0.0°
C7C8C9H4180.0°179.9°
C7C8C9C100.0°0.0°
C7C8C9C13179.7°179.9°
NC10C9C80.3°0.0°
NC10C9C11179.7°180.0°
NC10C9C13180.0°179.9°
NC10C11C12179.6°180.0°
C10NC7H3179.5°179.7°
NC10C11H50.4°0.0°
C10NC6H852.7°35.0°
C10NC6H9171.4°155.0°
C8C9C10C13179.7°179.9°
C8C9C10C11180.0°180.0°
C8C9C13O0.5°0.1°
C8C9C13N1179.9°180.0°
C9C8C7H3179.7°179.7°
C9C10C11C120.0°0.1°
C10C9C13O179.9°180.0°
C10C9C13N10.2°0.1°
C10C9C8H4180.0°179.9°
C9C10C11H5180.0°180.0°
C11C10C9C130.2°0.1°
C10C11C12H5180.0°179.9°
C10C11C12N10.4°0.1°
C10C11C12H7179.6°180.0°
C9C13ON1179.7°179.9°
C9C13N1C120.1°0.0°
C13C9C8H40.3°0.0°
C9C13N1H6179.9°179.9°
C11C12N1C130.4°0.0°
C11C12N1H7180.0°180.0°
C11C12N1H6179.6°179.9°
OC13N1C12179.6°180.0°
OC13N1H60.4°0.0°
C13N1C12H6180.0°180.0°
C13N1C12H7179.6°180.0°
N1C12C11H5179.7°180.0°
H1C1C2H20.1°0.1°
H1C1CH120.2°0.3°
H3C7C8H40.3°0.4°
H5C11C12H70.3°0.0°
H7C12N1H60.4°0.0°
H10C4C5H110.1°0.0°
H11C5CH120.3°0.2°

250059

PDB entries from 2026-03-04

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