SSM
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C2 | C | sing | 1.51Å | 1.51Å | |
C | O | doub | 1.21Å | 1.25Å | |
C | N | sing | 1.35Å | 1.35Å | |
N | CA | sing | 1.46Å | 1.48Å | |
CA | CB | sing | 1.53Å | 1.55Å | |
CA | C3 | sing | 1.51Å | 1.46Å | |
CB | CG | sing | 1.53Å | 1.46Å | |
CG | SD | sing | 1.81Å | 1.83Å | |
SD | OD1 | doub | 1.42Å | 1.44Å | |
SD | CE | sing | 1.81Å | 1.78Å | |
C3 | O3 | doub | 1.21Å | 1.21Å | |
C3 | N2 | sing | 1.35Å | 1.30Å | |
N2 | C1 | sing | 1.47Å | 1.46Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
C2 | H2A | sing | 1.09Å | 1.10Å | |
C2 | H2B | sing | 1.09Å | 1.10Å | |
N | HN | sing | 0.97Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB | sing | 1.09Å | 1.10Å | |
CB | HBA | sing | 1.09Å | 1.10Å | |
CG | HG | sing | 1.09Å | 1.10Å | |
CG | HGA | sing | 1.09Å | 1.10Å | |
CE | HE | sing | 1.09Å | 1.10Å | |
CE | HEA | sing | 1.09Å | 1.10Å | |
CE | HEB | sing | 1.09Å | 1.10Å | |
N2 | HN2 | sing | 0.97Å | 1.00Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C1 | H1A | sing | 1.09Å | 1.10Å | |
C1 | H1B | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C | O | 120.1° | 120.0° |
C2 | C | N | 118.5° | 120.0° |
C | C2 | H2 | 109.5° | 109.5° |
C | C2 | H2A | 109.4° | 109.5° |
C | C2 | H2B | 109.5° | 109.5° |
O | C | N | 121.3° | 120.0° |
C | N | CA | 122.5° | 120.0° |
C | N | HN | 118.7° | 120.0° |
N | CA | CB | 108.7° | 109.5° |
N | CA | C3 | 109.6° | 109.5° |
CA | N | HN | 118.7° | 120.0° |
N | CA | HA | 110.1° | 109.5° |
CB | CA | C3 | 110.3° | 109.5° |
CA | CB | CG | 114.2° | 109.4° |
CB | CA | HA | 109.5° | 109.4° |
CA | CB | HB | 107.9° | 109.5° |
CA | CB | HBA | 106.9° | 109.5° |
CA | C3 | O3 | 119.9° | 120.0° |
CA | C3 | N2 | 118.7° | 120.0° |
C3 | CA | HA | 108.6° | 109.5° |
CB | CG | SD | 105.4° | 109.4° |
CG | CB | HB | 108.0° | 109.4° |
CG | CB | HBA | 106.9° | 109.5° |
CB | CG | HG | 110.9° | 109.5° |
CB | CG | HGA | 111.7° | 109.5° |
CG | SD | OD1 | 109.7° | 109.5° |
CG | SD | CE | 104.5° | 103.0° |
SD | CG | HG | 110.9° | 109.4° |
SD | CG | HGA | 111.8° | 109.5° |
OD1 | SD | CE | 113.5° | 109.5° |
SD | CE | HE | 109.5° | 109.5° |
SD | CE | HEA | 109.5° | 109.5° |
SD | CE | HEB | 109.5° | 109.5° |
O3 | C3 | N2 | 121.3° | 120.0° |
C3 | N2 | C1 | 119.7° | 120.0° |
C3 | N2 | HN2 | 120.1° | 120.1° |
C1 | N2 | HN2 | 120.2° | 120.0° |
N2 | C1 | H1 | 109.5° | 109.5° |
N2 | C1 | H1A | 109.5° | 109.5° |
N2 | C1 | H1B | 109.4° | 109.5° |
H2 | C2 | H2A | 109.5° | 109.4° |
H2 | C2 | H2B | 109.4° | 109.5° |
H2A | C2 | H2B | 109.5° | 109.5° |
HB | CB | HBA | 113.2° | 109.5° |
HG | CG | HGA | 106.3° | 109.5° |
HE | CE | HEA | 109.4° | 109.5° |
HE | CE | HEB | 109.5° | 109.4° |
HEA | CE | HEB | 109.5° | 109.5° |
H1 | C1 | H1A | 109.5° | 109.4° |
H1 | C1 | H1B | 109.4° | 109.5° |
H1A | C1 | H1B | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C | O | N | 178.4° | 180.0° |
C2 | C | N | CA | 180.0° | 180.0° |
C | C2 | H2 | H2A | 120.0° | 120.0° |
C | C2 | H2 | H2B | 120.0° | 120.0° |
C | C2 | H2A | H2B | 120.0° | 120.1° |
C2 | C | N | HN | 0.0° | 0.0° |
O | C | N | CA | 1.6° | 0.0° |
O | C | C2 | H2 | 37.5° | 0.0° |
O | C | C2 | H2A | 157.5° | 120.0° |
O | C | C2 | H2B | 82.5° | 120.0° |
O | C | N | HN | 178.4° | 180.0° |
C | N | CA | HN | 180.0° | 180.0° |
C | N | CA | CB | 139.5° | 60.0° |
C | N | CA | C3 | 18.9° | 60.0° |
N | C | C2 | H2 | 140.9° | 180.0° |
N | C | C2 | H2A | 20.9° | 60.1° |
N | C | C2 | H2B | 99.1° | 60.0° |
C | N | CA | HA | 100.5° | 180.0° |
N | CA | CB | C3 | 120.2° | 120.0° |
N | CA | CB | HA | 120.4° | 120.0° |
N | CA | C3 | HA | 120.4° | 120.0° |
N | CA | CB | CG | 145.1° | 65.0° |
N | CA | C3 | O3 | 98.7° | 20.0° |
N | CA | C3 | N2 | 79.3° | 160.0° |
N | CA | CB | HB | 25.1° | 55.0° |
N | CA | CB | HBA | 97.0° | 175.0° |
CB | CA | C3 | HA | 120.0° | 120.0° |
CA | CB | CG | HB | 120.0° | 120.0° |
CA | CB | CG | HBA | 117.9° | 120.0° |
CA | CB | CG | SD | 140.9° | 180.0° |
CB | CA | C3 | O3 | 20.9° | 100.0° |
CB | CA | C3 | N2 | 161.1° | 80.0° |
CB | CA | N | HN | 40.5° | 120.0° |
CA | CB | HB | HBA | 118.1° | 120.0° |
CA | CB | CG | HG | 99.1° | 60.1° |
CA | CB | CG | HGA | 19.3° | 60.0° |
C3 | CA | CB | CG | 94.8° | 175.0° |
CA | C3 | O3 | N2 | 177.9° | 180.0° |
CA | C3 | N2 | C1 | 178.3° | 180.0° |
C3 | CA | N | HN | 161.1° | 120.0° |
C3 | CA | CB | HB | 145.2° | 65.0° |
C3 | CA | CB | HBA | 23.2° | 55.0° |
CA | C3 | N2 | HN2 | 1.7° | 0.0° |
CB | CG | SD | HG | 120.0° | 119.9° |
CB | CG | SD | HGA | 121.5° | 120.0° |
CB | CG | SD | OD1 | 49.0° | 63.6° |
CB | CG | SD | CE | 171.1° | 180.0° |
CG | CB | CA | HA | 24.7° | 55.1° |
CG | CB | HB | HBA | 118.1° | 120.0° |
CB | CG | HG | HGA | 121.7° | 120.1° |
CG | SD | OD1 | CE | 116.5° | 112.2° |
SD | CG | CB | HB | 20.9° | 60.0° |
SD | CG | CB | HBA | 101.2° | 60.0° |
SD | CG | HG | HGA | 121.7° | 120.0° |
CG | SD | CE | HE | 125.5° | 59.9° |
CG | SD | CE | HEA | 114.6° | 180.0° |
CG | SD | CE | HEB | 5.5° | 60.0° |
OD1 | SD | CG | HG | 71.0° | 56.3° |
OD1 | SD | CG | HGA | 170.6° | 176.4° |
OD1 | SD | CE | HE | 115.1° | 176.4° |
OD1 | SD | CE | HEA | 4.9° | 63.6° |
OD1 | SD | CE | HEB | 124.9° | 56.4° |
CE | SD | CG | HG | 51.0° | 60.0° |
CE | SD | CG | HGA | 67.4° | 60.0° |
SD | CE | HE | HEA | 120.0° | 120.1° |
SD | CE | HE | HEB | 120.0° | 120.0° |
SD | CE | HEA | HEB | 120.0° | 120.0° |
O3 | C3 | N2 | C1 | 0.3° | 0.0° |
O3 | C3 | CA | HA | 140.9° | 140.0° |
O3 | C3 | N2 | HN2 | 179.7° | 180.0° |
C3 | N2 | C1 | HN2 | 180.0° | 180.0° |
N2 | C3 | CA | HA | 41.1° | 40.0° |
C3 | N2 | C1 | H1 | 174.1° | 60.0° |
C3 | N2 | C1 | H1A | 54.1° | 180.0° |
C3 | N2 | C1 | H1B | 65.9° | 60.0° |
N2 | C1 | H1 | H1A | 120.0° | 120.0° |
N2 | C1 | H1 | H1B | 120.0° | 120.0° |
N2 | C1 | H1A | H1B | 120.0° | 120.0° |
H2 | C2 | H2A | H2B | 120.0° | 119.9° |
HN | N | CA | HA | 79.5° | 0.0° |
HA | CA | CB | HB | 95.3° | 175.0° |
HA | CA | CB | HBA | 142.6° | 65.0° |
HB | CB | CG | HG | 140.9° | 179.9° |
HB | CB | CG | HGA | 100.7° | 60.0° |
HBA | CB | CG | HG | 18.8° | 59.9° |
HBA | CB | CG | HGA | 137.2° | 180.0° |
HE | CE | HEA | HEB | 120.0° | 119.9° |
HN2 | N2 | C1 | H1 | 5.9° | 120.0° |
HN2 | N2 | C1 | H1A | 125.9° | 0.0° |
HN2 | N2 | C1 | H1B | 114.0° | 120.0° |
H1 | C1 | H1A | H1B | 120.0° | 119.9° |