SRP
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| PA | O1A | doub | 1.48Å | 1.43Å | |
| PA | O2A | sing | 1.61Å | 1.46Å | |
| PA | O3A | sing | 1.61Å | 1.57Å | |
| PA | O5' | sing | 1.61Å | 1.46Å | |
| O2A | H2A | sing | 0.97Å | 0.95Å | |
| O3A | C | sing | 1.34Å | 1.43Å | |
| O5' | C5' | sing | 1.43Å | 1.26Å | |
| C5' | C4' | sing | 1.53Å | 1.48Å | |
| C5' | H5'1 | sing | 1.09Å | 1.11Å | |
| C5' | H5'2 | sing | 1.09Å | 1.12Å | |
| C4' | O4' | sing | 1.44Å | 1.44Å | |
| C4' | C3' | sing | 1.54Å | 1.51Å | |
| C4' | H4' | sing | 1.09Å | 1.12Å | |
| O4' | C1' | sing | 1.44Å | 1.46Å | |
| C3' | O3' | sing | 1.43Å | 1.42Å | |
| C3' | C2' | sing | 1.55Å | 1.54Å | |
| C3' | H3' | sing | 1.09Å | 1.11Å | |
| O3' | H2 | sing | 0.97Å | 0.95Å | |
| C2' | O2' | sing | 1.43Å | 1.42Å | |
| C2' | C1' | sing | 1.55Å | 1.55Å | |
| C2' | H2' | sing | 1.09Å | 1.12Å | |
| O2' | H1 | sing | 0.97Å | 0.95Å | |
| C1' | N9 | sing | 1.46Å | 1.48Å | |
| C1' | H1' | sing | 1.09Å | 1.12Å | |
| N9 | C8 | sing | 1.36Å | 1.41Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.34Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.29Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.10Å | |
| N7 | C5 | sing | 1.36Å | 1.39Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.44Å | Aromatic |
| C5 | C4 | doub | 1.41Å | 1.38Å | Aromatic |
| C6 | N6 | sing | 1.38Å | 1.32Å | |
| C6 | N1 | doub | 1.33Å | 1.39Å | Aromatic |
| N6 | HN61 | sing | 0.97Å | 1.02Å | |
| N6 | HN62 | sing | 0.97Å | 1.02Å | |
| N1 | C2 | sing | 1.32Å | 1.35Å | Aromatic |
| C2 | N3 | doub | 1.32Å | 1.35Å | Aromatic |
| C2 | H3 | sing | 1.08Å | 1.10Å | |
| N3 | C4 | sing | 1.33Å | 1.43Å | Aromatic |
| O | C | doub | 1.21Å | 1.23Å | |
| C | CA | sing | 1.51Å | 1.53Å | |
| CA | N | sing | 1.47Å | 1.47Å | |
| CA | CB | sing | 1.53Å | 1.53Å | |
| CA | HA | sing | 1.09Å | 1.11Å | |
| N | HN1 | sing | 1.01Å | 1.02Å | |
| N | HN2 | sing | 1.01Å | 1.02Å | |
| CB | OG | sing | 1.43Å | 1.43Å | |
| CB | HB1 | sing | 1.09Å | 1.11Å | |
| CB | HB2 | sing | 1.09Å | 1.11Å | |
| OG | HOG | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1A | PA | O2A | 123.0° | 109.5° |
| O1A | PA | O3A | 119.5° | 109.5° |
| O1A | PA | O5' | 82.2° | 109.4° |
| O2A | PA | O3A | 117.1° | 109.5° |
| O2A | PA | O5' | 98.9° | 109.4° |
| PA | O2A | H2A | 123.0° | 106.8° |
| O3A | PA | O5' | 94.6° | 109.5° |
| PA | O3A | C | 132.4° | 120.0° |
| PA | O5' | C5' | 156.8° | 106.9° |
| O3A | C | O | 119.9° | 120.0° |
| O3A | C | CA | 118.8° | 120.0° |
| O5' | C5' | C4' | 153.5° | 109.5° |
| O5' | C5' | H5'1 | 97.8° | 109.5° |
| O5' | C5' | H5'2 | 97.8° | 109.4° |
| C4' | C5' | H5'1 | 97.7° | 109.5° |
| C4' | C5' | H5'2 | 97.7° | 109.5° |
| C5' | C4' | O4' | 99.3° | 109.9° |
| C5' | C4' | C3' | 95.8° | 109.9° |
| C5' | C4' | H4' | 122.6° | 109.9° |
| H5'1 | C5' | H5'2 | 108.0° | 109.5° |
| O4' | C4' | C3' | 107.5° | 107.4° |
| O4' | C4' | H4' | 113.1° | 109.9° |
| C4' | O4' | C1' | 110.1° | 107.0° |
| C3' | C4' | H4' | 115.9° | 109.8° |
| C4' | C3' | O3' | 116.2° | 110.8° |
| C4' | C3' | C2' | 101.2° | 104.0° |
| C4' | C3' | H3' | 113.1° | 110.4° |
| O4' | C1' | C2' | 104.9° | 103.5° |
| O4' | C1' | N9 | 108.2° | 110.6° |
| O4' | C1' | H1' | 115.1° | 110.6° |
| O3' | C3' | C2' | 115.7° | 110.5° |
| O3' | C3' | H3' | 97.7° | 110.5° |
| C3' | O3' | H2 | 116.2° | 106.8° |
| C2' | C3' | H3' | 113.6° | 110.5° |
| C3' | C2' | O2' | 109.2° | 110.8° |
| C3' | C2' | C1' | 105.5° | 102.1° |
| C3' | C2' | H2' | 112.7° | 111.0° |
| O2' | C2' | C1' | 110.8° | 110.9° |
| O2' | C2' | H2' | 107.5° | 110.8° |
| C2' | O2' | H1 | 109.2° | 106.8° |
| C1' | C2' | H2' | 111.1° | 110.9° |
| C2' | C1' | N9 | 114.4° | 110.7° |
| C2' | C1' | H1' | 108.9° | 110.6° |
| N9 | C1' | H1' | 105.7° | 110.6° |
| C1' | N9 | C8 | 130.9° | 126.3° |
| C1' | N9 | C4 | 123.9° | 126.3° |
| C8 | N9 | C4 | 105.2° | 107.4° |
| N9 | C8 | N7 | 114.3° | 110.0° |
| N9 | C8 | H8 | 126.6° | 125.0° |
| N9 | C4 | C5 | 106.1° | 106.0° |
| N9 | C4 | N3 | 126.3° | 134.9° |
| N7 | C8 | H8 | 119.1° | 124.9° |
| C8 | N7 | C5 | 102.4° | 109.4° |
| N7 | C5 | C6 | 133.0° | 134.7° |
| N7 | C5 | C4 | 112.1° | 107.1° |
| C6 | C5 | C4 | 114.9° | 118.1° |
| C5 | C6 | N6 | 121.9° | 120.7° |
| C5 | C6 | N1 | 118.8° | 118.5° |
| C5 | C4 | N3 | 127.6° | 119.1° |
| N6 | C6 | N1 | 119.3° | 120.8° |
| C6 | N6 | HN61 | 121.9° | 120.0° |
| C6 | N6 | HN62 | 107.8° | 120.0° |
| C6 | N1 | C2 | 120.6° | 121.2° |
| HN61 | N6 | HN62 | 107.7° | 120.0° |
| N1 | C2 | N3 | 126.3° | 122.4° |
| N1 | C2 | H3 | 116.8° | 118.8° |
| N3 | C2 | H3 | 116.9° | 118.8° |
| C2 | N3 | C4 | 111.8° | 120.6° |
| O | C | CA | 120.4° | 120.0° |
| C | CA | N | 109.5° | 109.5° |
| C | CA | CB | 110.2° | 109.5° |
| C | CA | HA | 109.0° | 109.5° |
| N | CA | CB | 109.8° | 109.5° |
| N | CA | HA | 109.4° | 109.4° |
| CA | N | HN1 | 109.5° | 106.7° |
| CA | N | HN2 | 112.2° | 106.6° |
| CB | CA | HA | 108.8° | 109.5° |
| CA | CB | OG | 110.4° | 109.5° |
| CA | CB | HB1 | 111.8° | 109.5° |
| CA | CB | HB2 | 111.9° | 109.5° |
| HN1 | N | HN2 | 112.2° | 106.7° |
| OG | CB | HB1 | 111.8° | 109.5° |
| OG | CB | HB2 | 111.8° | 109.4° |
| CB | OG | HOG | 110.5° | 106.8° |
| HB1 | CB | HB2 | 98.6° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1A | PA | O2A | O3A | 173.7° | 120.1° |
| O1A | PA | O2A | O5' | 86.5° | 119.9° |
| O1A | PA | O3A | O5' | 83.7° | 120.0° |
| O1A | PA | O2A | H2A | 180.0° | 180.0° |
| O1A | PA | O3A | C | 4.8° | 55.0° |
| O1A | PA | O5' | C5' | 169.3° | 55.0° |
| O2A | PA | O3A | O5' | 102.4° | 120.0° |
| O2A | PA | O3A | C | 178.7° | 65.1° |
| O2A | PA | O5' | C5' | 68.4° | 65.0° |
| O3A | PA | O2A | H2A | 6.4° | 60.0° |
| O3A | PA | O5' | C5' | 50.0° | 175.0° |
| PA | O3A | C | O | 23.5° | 0.0° |
| PA | O3A | C | CA | 167.3° | 180.0° |
| O5' | PA | O2A | H2A | 93.5° | 60.0° |
| O5' | PA | O3A | C | 78.9° | 175.0° |
| PA | O5' | C5' | C4' | 84.6° | 180.0° |
| PA | O5' | C5' | H5'1 | 40.7° | 60.0° |
| PA | O5' | C5' | H5'2 | 150.2° | 60.0° |
| O3A | C | O | CA | 168.9° | 180.0° |
| O3A | C | CA | N | 178.1° | 160.0° |
| O3A | C | CA | CB | 57.1° | 80.0° |
| O3A | C | CA | HA | 62.2° | 40.0° |
| O5' | C5' | C4' | H5'1 | 125.3° | 120.0° |
| O5' | C5' | C4' | H5'2 | 125.3° | 120.0° |
| O5' | C5' | H5'1 | H5'2 | 100.8° | 120.0° |
| O5' | C5' | C4' | O4' | 112.9° | 66.7° |
| O5' | C5' | C4' | C3' | 4.0° | 175.3° |
| O5' | C5' | C4' | H4' | 121.9° | 54.3° |
| C4' | C5' | H5'1 | H5'2 | 100.8° | 120.0° |
| C5' | C4' | O4' | C3' | 99.2° | 119.5° |
| C5' | C4' | O4' | H4' | 131.6° | 121.0° |
| C5' | C4' | C3' | H4' | 130.7° | 121.0° |
| C5' | C4' | O4' | C1' | 120.6° | 146.0° |
| C5' | C4' | C3' | O3' | 100.3° | 119.8° |
| C5' | C4' | C3' | C2' | 133.5° | 121.4° |
| C5' | C4' | C3' | H3' | 11.6° | 2.9° |
| H5'1 | C5' | C4' | O4' | 121.8° | 53.3° |
| H5'1 | C5' | C4' | C3' | 129.3° | 64.7° |
| H5'1 | C5' | C4' | H4' | 3.4° | 174.3° |
| H5'2 | C5' | C4' | O4' | 12.4° | 173.3° |
| H5'2 | C5' | C4' | C3' | 121.3° | 55.3° |
| H5'2 | C5' | C4' | H4' | 112.8° | 65.6° |
| O4' | C4' | C3' | H4' | 127.6° | 119.5° |
| O4' | C4' | C3' | O3' | 158.0° | 120.6° |
| O4' | C4' | C3' | C2' | 31.8° | 1.9° |
| O4' | C4' | C3' | H3' | 90.1° | 116.7° |
| C4' | O4' | C1' | C2' | 1.1° | 40.1° |
| C4' | O4' | C1' | N9 | 123.6° | 158.7° |
| C4' | O4' | C1' | H1' | 118.5° | 78.4° |
| C3' | C4' | O4' | C1' | 21.4° | 26.4° |
| C4' | C3' | O3' | C2' | 118.5° | 114.7° |
| C4' | C3' | O3' | H3' | 120.5° | 122.7° |
| C4' | C3' | C2' | H3' | 121.5° | 118.5° |
| C4' | C3' | O3' | H2 | 180.0° | 176.2° |
| C4' | C3' | C2' | O2' | 88.7° | 139.2° |
| C4' | C3' | C2' | C1' | 30.5° | 21.0° |
| C4' | C3' | C2' | H2' | 151.9° | 97.2° |
| H4' | C4' | O4' | C1' | 107.8° | 93.0° |
| H4' | C4' | C3' | O3' | 30.4° | 1.1° |
| H4' | C4' | C3' | C2' | 95.8° | 117.6° |
| H4' | C4' | C3' | H3' | 142.3° | 123.8° |
| O4' | C1' | C2' | C3' | 18.9° | 37.1° |
| O4' | C1' | C2' | O2' | 99.2° | 155.2° |
| O4' | C1' | C2' | N9 | 118.3° | 118.5° |
| O4' | C1' | C2' | H1' | 123.7° | 118.5° |
| O4' | C1' | C2' | H2' | 141.4° | 81.1° |
| O4' | C1' | N9 | H1' | 123.7° | 122.9° |
| O4' | C1' | N9 | C8 | 43.4° | 23.5° |
| O4' | C1' | N9 | C4 | 136.5° | 156.8° |
| O3' | C3' | C2' | H3' | 111.9° | 122.5° |
| O3' | C3' | C2' | O2' | 37.8° | 20.3° |
| O3' | C3' | C2' | C1' | 157.0° | 97.9° |
| O3' | C3' | C2' | H2' | 81.6° | 143.9° |
| C2' | C3' | O3' | H2 | 61.5° | 61.5° |
| C3' | C2' | O2' | C1' | 115.8° | 112.6° |
| C3' | C2' | O2' | H2' | 122.6° | 123.7° |
| C3' | C2' | C1' | H2' | 122.4° | 118.3° |
| C3' | C2' | O2' | H1 | 180.0° | 67.3° |
| C3' | C2' | C1' | N9 | 99.4° | 155.7° |
| C3' | C2' | C1' | H1' | 142.6° | 81.3° |
| H3' | C3' | O3' | H2 | 59.5° | 61.1° |
| H3' | C3' | C2' | O2' | 149.8° | 102.3° |
| H3' | C3' | C2' | C1' | 91.1° | 139.6° |
| H3' | C3' | C2' | H2' | 30.3° | 21.3° |
| O2' | C2' | C1' | H2' | 119.5° | 123.6° |
| O2' | C2' | C1' | N9 | 142.5° | 86.2° |
| O2' | C2' | C1' | H1' | 24.5° | 36.8° |
| C1' | C2' | O2' | H1 | 64.2° | 180.0° |
| C2' | C1' | N9 | H1' | 119.8° | 123.0° |
| C2' | C1' | N9 | C8 | 73.1° | 90.6° |
| C2' | C1' | N9 | C4 | 107.0° | 89.1° |
| H2' | C2' | O2' | H1 | 57.4° | 56.3° |
| H2' | C2' | C1' | N9 | 23.0° | 37.4° |
| H2' | C2' | C1' | H1' | 95.0° | 160.4° |
| C1' | N9 | C8 | C4 | 179.9° | 179.8° |
| C1' | N9 | C8 | N7 | 179.9° | 180.0° |
| C1' | N9 | C8 | H8 | 0.1° | 0.0° |
| C1' | N9 | C4 | C5 | 179.9° | 179.9° |
| C1' | N9 | C4 | N3 | 0.0° | 0.7° |
| H1' | C1' | N9 | C8 | 167.2° | 146.4° |
| H1' | C1' | N9 | C4 | 12.8° | 33.8° |
| N9 | C8 | N7 | H8 | 180.0° | 180.0° |
| N9 | C8 | N7 | C5 | 0.0° | 0.0° |
| C8 | N9 | C4 | C5 | 0.0° | 0.4° |
| C8 | N9 | C4 | N3 | 180.0° | 179.5° |
| C4 | N9 | C8 | N7 | 0.0° | 0.2° |
| C4 | N9 | C8 | H8 | 180.0° | 179.8° |
| N9 | C4 | C5 | N7 | 0.0° | 0.4° |
| N9 | C4 | C5 | C6 | 180.0° | 179.8° |
| N9 | C4 | C5 | N3 | 179.9° | 179.3° |
| N9 | C4 | N3 | C2 | 180.0° | 179.6° |
| C8 | N7 | C5 | C6 | 180.0° | 180.0° |
| C8 | N7 | C5 | C4 | 0.0° | 0.3° |
| H8 | C8 | N7 | C5 | 180.0° | 180.0° |
| N7 | C5 | C6 | C4 | 180.0° | 179.7° |
| N7 | C5 | C6 | N6 | 0.1° | 0.0° |
| N7 | C5 | C6 | N1 | 180.0° | 180.0° |
| N7 | C5 | C4 | N3 | 180.0° | 179.7° |
| C5 | C6 | N6 | N1 | 179.9° | 180.0° |
| C5 | C6 | N6 | HN61 | 180.0° | 0.0° |
| C5 | C6 | N6 | HN62 | 54.8° | 180.0° |
| C5 | C6 | N1 | C2 | 0.0° | 0.0° |
| C6 | C5 | C4 | N3 | 0.1° | 0.5° |
| C4 | C5 | C6 | N6 | 179.9° | 179.7° |
| C4 | C5 | C6 | N1 | 0.0° | 0.3° |
| C5 | C4 | N3 | C2 | 0.1° | 0.5° |
| C6 | N6 | HN61 | HN62 | 125.2° | 180.0° |
| N6 | C6 | N1 | C2 | 179.9° | 180.0° |
| N1 | C6 | N6 | HN61 | 0.1° | 180.0° |
| N1 | C6 | N6 | HN62 | 125.3° | 0.0° |
| C6 | N1 | C2 | N3 | 0.0° | 0.0° |
| C6 | N1 | C2 | H3 | 180.0° | 180.0° |
| N1 | C2 | N3 | H3 | 180.0° | 180.0° |
| N1 | C2 | N3 | C4 | 0.1° | 0.3° |
| H3 | C2 | N3 | C4 | 180.0° | 179.7° |
| O | C | CA | N | 9.0° | 20.0° |
| O | C | CA | CB | 111.9° | 100.0° |
| O | C | CA | HA | 128.8° | 139.9° |
| C | CA | N | CB | 121.2° | 120.0° |
| C | CA | N | HA | 119.5° | 120.0° |
| C | CA | CB | HA | 119.5° | 120.0° |
| C | CA | N | HN1 | 180.0° | 60.1° |
| C | CA | N | HN2 | 54.7° | 173.8° |
| C | CA | CB | OG | 48.9° | 175.0° |
| C | CA | CB | HB1 | 76.3° | 65.0° |
| C | CA | CB | HB2 | 174.2° | 55.0° |
| N | CA | CB | HA | 119.7° | 120.0° |
| CA | N | HN1 | HN2 | 125.3° | 113.7° |
| N | CA | CB | OG | 71.9° | 65.0° |
| N | CA | CB | HB1 | 162.9° | 55.0° |
| N | CA | CB | HB2 | 53.4° | 175.0° |
| CB | CA | N | HN1 | 58.8° | 59.9° |
| CB | CA | N | HN2 | 66.5° | 53.8° |
| CA | CB | OG | HB1 | 125.2° | 120.0° |
| CA | CB | OG | HB2 | 125.3° | 120.0° |
| CA | CB | HB1 | HB2 | 117.8° | 120.1° |
| CA | CB | OG | HOG | 180.0° | 180.0° |
| HA | CA | N | HN1 | 60.6° | 180.0° |
| HA | CA | N | HN2 | 174.2° | 66.3° |
| HA | CA | CB | OG | 168.4° | 55.0° |
| HA | CA | CB | HB1 | 43.2° | 174.9° |
| HA | CA | CB | HB2 | 66.3° | 65.0° |
| OG | CB | HB1 | HB2 | 117.7° | 119.9° |
| HB1 | CB | OG | HOG | 54.8° | 60.0° |
| HB2 | CB | OG | HOG | 54.7° | 60.0° |
