SP5
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| CAB | CAC | sing | 1.51Å | 1.53Å | |
| CAC | OAA | doub | 1.21Å | 1.23Å | |
| CAC | NAD | sing | 1.35Å | 1.33Å | |
| NAD | CAE | sing | 1.47Å | 1.47Å | |
| CAE | CAF | sing | 1.53Å | 1.53Å | |
| CAF | CAG | sing | 1.53Å | 1.53Å | |
| CAG | NAH | sing | 1.47Å | 1.47Å | |
| NAH | CAI | sing | 1.47Å | 1.47Å | |
| CAI | CAJ | sing | 1.53Å | 1.53Å | |
| CAJ | CAK | sing | 1.53Å | 1.53Å | |
| CAK | CAL | sing | 1.53Å | 1.53Å | |
| CAL | NAM | sing | 1.47Å | 1.47Å | |
| NAM | CAN | sing | 1.47Å | 1.47Å | |
| CAN | CAO | sing | 1.53Å | 1.53Å | |
| CAO | CAP | sing | 1.53Å | 1.53Å | |
| CAP | NAQ | sing | 1.47Å | 1.47Å | |
| CAB | HAB | sing | 1.09Å | 1.10Å | |
| CAB | HABA | sing | 1.09Å | 1.10Å | |
| CAB | HABB | sing | 1.09Å | 1.10Å | |
| NAD | HNAD | sing | 0.97Å | 1.00Å | |
| CAE | HAE | sing | 1.09Å | 1.10Å | |
| CAE | HAEA | sing | 1.09Å | 1.10Å | |
| CAF | HAF | sing | 1.09Å | 1.10Å | |
| CAF | HAFA | sing | 1.09Å | 1.10Å | |
| CAG | HAG | sing | 1.09Å | 1.10Å | |
| CAG | HAGA | sing | 1.09Å | 1.10Å | |
| NAH | HNAH | sing | 1.01Å | 1.00Å | |
| CAI | HAI | sing | 1.09Å | 1.10Å | |
| CAI | HAIA | sing | 1.09Å | 1.10Å | |
| CAJ | HAJ | sing | 1.09Å | 1.10Å | |
| CAJ | HAJA | sing | 1.09Å | 1.10Å | |
| CAK | HAK | sing | 1.09Å | 1.10Å | |
| CAK | HAKA | sing | 1.09Å | 1.10Å | |
| CAL | HAL | sing | 1.09Å | 1.10Å | |
| CAL | HALA | sing | 1.09Å | 1.10Å | |
| NAM | HNAM | sing | 1.01Å | 1.00Å | |
| CAN | HAN | sing | 1.09Å | 1.10Å | |
| CAN | HANA | sing | 1.09Å | 1.10Å | |
| CAO | HAO | sing | 1.09Å | 1.10Å | |
| CAO | HAOA | sing | 1.09Å | 1.10Å | |
| CAP | HAP | sing | 1.09Å | 1.10Å | |
| CAP | HAPA | sing | 1.09Å | 1.10Å | |
| NAQ | HNAQ | sing | 1.01Å | 1.00Å | |
| NAQ | HNAA | sing | 1.01Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CAB | CAC | OAA | 120.7° | 120.0° |
| CAB | CAC | NAD | 115.2° | 120.0° |
| CAC | CAB | HAB | 109.5° | 109.5° |
| CAC | CAB | HABA | 109.5° | 109.5° |
| CAC | CAB | HABB | 109.4° | 109.5° |
| OAA | CAC | NAD | 124.0° | 120.0° |
| CAC | NAD | CAE | 122.0° | 120.0° |
| CAC | NAD | HNAD | 119.0° | 120.0° |
| NAD | CAE | CAF | 110.7° | 109.4° |
| CAE | NAD | HNAD | 119.0° | 120.0° |
| NAD | CAE | HAE | 109.1° | 109.5° |
| NAD | CAE | HAEA | 108.8° | 109.4° |
| CAE | CAF | CAG | 110.0° | 109.4° |
| CAF | CAE | HAE | 109.1° | 109.4° |
| CAF | CAE | HAEA | 108.8° | 109.5° |
| CAE | CAF | HAF | 109.3° | 109.5° |
| CAE | CAF | HAFA | 109.2° | 109.5° |
| CAF | CAG | NAH | 110.8° | 109.5° |
| CAG | CAF | HAF | 109.3° | 109.5° |
| CAG | CAF | HAFA | 109.2° | 109.5° |
| CAF | CAG | HAG | 109.1° | 109.5° |
| CAF | CAG | HAGA | 108.8° | 109.5° |
| CAG | NAH | CAI | 110.9° | 111.0° |
| NAH | CAG | HAG | 109.0° | 109.4° |
| NAH | CAG | HAGA | 108.8° | 109.5° |
| CAG | NAH | HNAH | 109.0° | 110.9° |
| NAH | CAI | CAJ | 108.7° | 109.5° |
| CAI | NAH | HNAH | 109.0° | 111.0° |
| NAH | CAI | HAI | 109.7° | 109.5° |
| NAH | CAI | HAIA | 109.9° | 109.5° |
| CAI | CAJ | CAK | 111.7° | 109.5° |
| CAJ | CAI | HAI | 109.7° | 109.5° |
| CAJ | CAI | HAIA | 109.9° | 109.5° |
| CAI | CAJ | HAJ | 108.8° | 109.5° |
| CAI | CAJ | HAJA | 108.2° | 109.5° |
| CAJ | CAK | CAL | 112.1° | 109.4° |
| CAK | CAJ | HAJ | 108.7° | 109.5° |
| CAK | CAJ | HAJA | 108.2° | 109.5° |
| CAJ | CAK | HAK | 108.6° | 109.4° |
| CAJ | CAK | HAKA | 108.0° | 109.5° |
| CAK | CAL | NAM | 109.1° | 109.5° |
| CAL | CAK | HAK | 108.6° | 109.5° |
| CAL | CAK | HAKA | 108.0° | 109.5° |
| CAK | CAL | HAL | 109.6° | 109.5° |
| CAK | CAL | HALA | 109.7° | 109.5° |
| CAL | NAM | CAN | 108.8° | 111.0° |
| NAM | CAL | HAL | 109.6° | 109.5° |
| NAM | CAL | HALA | 109.7° | 109.4° |
| CAL | NAM | HNAM | 109.7° | 111.0° |
| NAM | CAN | CAO | 109.5° | 109.5° |
| CAN | NAM | HNAM | 109.7° | 111.0° |
| NAM | CAN | HAN | 109.5° | 109.5° |
| NAM | CAN | HANA | 109.4° | 109.5° |
| CAN | CAO | CAP | 110.7° | 109.5° |
| CAO | CAN | HAN | 109.4° | 109.5° |
| CAO | CAN | HANA | 109.5° | 109.5° |
| CAN | CAO | HAO | 109.0° | 109.5° |
| CAN | CAO | HAOA | 108.7° | 109.5° |
| CAO | CAP | NAQ | 109.9° | 109.5° |
| CAP | CAO | HAO | 109.1° | 109.5° |
| CAP | CAO | HAOA | 108.8° | 109.4° |
| CAO | CAP | HAP | 109.3° | 109.5° |
| CAO | CAP | HAPA | 109.2° | 109.4° |
| NAQ | CAP | HAP | 109.3° | 109.5° |
| NAQ | CAP | HAPA | 109.2° | 109.5° |
| CAP | NAQ | HNAQ | 109.5° | 111.0° |
| CAP | NAQ | HNAA | 109.4° | 111.0° |
| HAB | CAB | HABA | 109.4° | 109.5° |
| HAB | CAB | HABB | 109.4° | 109.4° |
| HABA | CAB | HABB | 109.5° | 109.4° |
| HAE | CAE | HAEA | 110.4° | 109.5° |
| HAF | CAF | HAFA | 109.9° | 109.4° |
| HAG | CAG | HAGA | 110.5° | 109.4° |
| HAI | CAI | HAIA | 108.9° | 109.5° |
| HAJ | CAJ | HAJA | 111.2° | 109.5° |
| HAK | CAK | HAKA | 111.6° | 109.5° |
| HAL | CAL | HALA | 109.2° | 109.5° |
| HAN | CAN | HANA | 109.5° | 109.4° |
| HAO | CAO | HAOA | 110.5° | 109.5° |
| HAP | CAP | HAPA | 109.8° | 109.5° |
| HNAQ | NAQ | HNAA | 109.5° | 111.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CAB | CAC | OAA | NAD | 178.4° | 180.0° |
| CAB | CAC | NAD | CAE | 0.4° | 180.0° |
| CAC | CAB | HAB | HABA | 120.0° | 120.1° |
| CAC | CAB | HAB | HABB | 120.0° | 120.0° |
| CAC | CAB | HABA | HABB | 120.0° | 120.0° |
| CAB | CAC | NAD | HNAD | 179.6° | 0.0° |
| OAA | CAC | NAD | CAE | 178.1° | 0.1° |
| OAA | CAC | CAB | HAB | 141.1° | 89.9° |
| OAA | CAC | CAB | HABA | 21.1° | 150.0° |
| OAA | CAC | CAB | HABB | 99.0° | 30.0° |
| OAA | CAC | NAD | HNAD | 1.9° | 180.0° |
| CAC | NAD | CAE | HNAD | 180.0° | 180.0° |
| CAC | NAD | CAE | CAF | 173.8° | 180.0° |
| NAD | CAC | CAB | HAB | 37.4° | 90.0° |
| NAD | CAC | CAB | HABA | 157.4° | 30.0° |
| NAD | CAC | CAB | HABB | 82.5° | 150.0° |
| CAC | NAD | CAE | HAE | 53.8° | 60.1° |
| CAC | NAD | CAE | HAEA | 66.7° | 60.0° |
| NAD | CAE | CAF | HAE | 120.0° | 120.0° |
| NAD | CAE | CAF | HAEA | 119.5° | 120.0° |
| NAD | CAE | CAF | CAG | 176.1° | 180.0° |
| NAD | CAE | HAE | HAEA | 119.5° | 120.0° |
| NAD | CAE | CAF | HAF | 63.9° | 60.0° |
| NAD | CAE | CAF | HAFA | 56.4° | 59.9° |
| CAE | CAF | CAG | HAF | 120.0° | 120.0° |
| CAE | CAF | CAG | HAFA | 119.8° | 120.0° |
| CAE | CAF | CAG | NAH | 137.2° | 180.0° |
| CAF | CAE | NAD | HNAD | 6.2° | 0.0° |
| CAF | CAE | HAE | HAEA | 119.5° | 120.0° |
| CAE | CAF | HAF | HAFA | 119.8° | 120.0° |
| CAE | CAF | CAG | HAG | 102.8° | 60.0° |
| CAE | CAF | CAG | HAGA | 17.7° | 60.0° |
| CAF | CAG | NAH | HAG | 120.0° | 120.0° |
| CAF | CAG | NAH | HAGA | 119.5° | 120.0° |
| CAF | CAG | NAH | CAI | 112.1° | 180.0° |
| CAG | CAF | CAE | HAE | 56.1° | 60.1° |
| CAG | CAF | CAE | HAEA | 64.4° | 60.0° |
| CAG | CAF | HAF | HAFA | 119.8° | 120.1° |
| CAF | CAG | HAG | HAGA | 119.5° | 120.0° |
| CAF | CAG | NAH | HNAH | 7.9° | 56.1° |
| CAG | NAH | CAI | HNAH | 120.0° | 123.9° |
| CAG | NAH | CAI | CAJ | 143.1° | 180.0° |
| NAH | CAG | CAF | HAF | 17.2° | 60.0° |
| NAH | CAG | CAF | HAFA | 103.0° | 59.9° |
| NAH | CAG | HAG | HAGA | 119.5° | 120.0° |
| CAG | NAH | CAI | HAI | 96.9° | 60.0° |
| CAG | NAH | CAI | HAIA | 22.8° | 60.0° |
| NAH | CAI | CAJ | HAI | 120.0° | 120.0° |
| NAH | CAI | CAJ | HAIA | 120.3° | 120.0° |
| NAH | CAI | CAJ | CAK | 98.9° | 180.0° |
| CAI | NAH | CAG | HAG | 127.9° | 60.0° |
| CAI | NAH | CAG | HAGA | 7.4° | 60.0° |
| NAH | CAI | HAI | HAIA | 120.3° | 120.0° |
| NAH | CAI | CAJ | HAJ | 141.2° | 60.0° |
| NAH | CAI | CAJ | HAJA | 20.2° | 60.0° |
| CAI | CAJ | CAK | HAJ | 120.0° | 120.0° |
| CAI | CAJ | CAK | HAJA | 119.0° | 120.0° |
| CAI | CAJ | CAK | CAL | 161.7° | 180.0° |
| CAJ | CAI | NAH | HNAH | 23.1° | 56.1° |
| CAJ | CAI | HAI | HAIA | 120.3° | 120.0° |
| CAI | CAJ | HAJ | HAJA | 119.1° | 120.0° |
| CAI | CAJ | CAK | HAK | 78.3° | 60.0° |
| CAI | CAJ | CAK | HAKA | 42.8° | 60.0° |
| CAJ | CAK | CAL | HAK | 120.0° | 120.0° |
| CAJ | CAK | CAL | HAKA | 118.8° | 120.0° |
| CAJ | CAK | CAL | NAM | 7.0° | 180.0° |
| CAK | CAJ | CAI | HAI | 21.1° | 60.0° |
| CAK | CAJ | CAI | HAIA | 140.8° | 60.0° |
| CAK | CAJ | HAJ | HAJA | 119.1° | 120.0° |
| CAJ | CAK | HAK | HAKA | 118.9° | 120.0° |
| CAJ | CAK | CAL | HAL | 127.0° | 60.0° |
| CAJ | CAK | CAL | HALA | 113.1° | 60.0° |
| CAK | CAL | NAM | HAL | 120.0° | 120.0° |
| CAK | CAL | NAM | HALA | 120.2° | 120.0° |
| CAK | CAL | NAM | CAN | 162.1° | 180.0° |
| CAL | CAK | CAJ | HAJ | 41.7° | 60.0° |
| CAL | CAK | CAJ | HAJA | 79.3° | 60.0° |
| CAL | CAK | HAK | HAKA | 118.9° | 120.0° |
| CAK | CAL | HAL | HALA | 120.2° | 120.0° |
| CAK | CAL | NAM | HNAM | 77.9° | 56.0° |
| CAL | NAM | CAN | HNAM | 120.0° | 124.0° |
| CAL | NAM | CAN | CAO | 59.2° | 180.0° |
| NAM | CAL | CAK | HAK | 113.0° | 60.0° |
| NAM | CAL | CAK | HAKA | 125.9° | 60.0° |
| NAM | CAL | HAL | HALA | 120.1° | 120.0° |
| CAL | NAM | CAN | HAN | 60.8° | 60.0° |
| CAL | NAM | CAN | HANA | 179.2° | 60.0° |
| NAM | CAN | CAO | HAN | 120.0° | 120.0° |
| NAM | CAN | CAO | HANA | 120.0° | 120.0° |
| NAM | CAN | CAO | CAP | 178.0° | 180.0° |
| CAN | NAM | CAL | HAL | 42.1° | 60.0° |
| CAN | NAM | CAL | HALA | 77.7° | 60.0° |
| NAM | CAN | HAN | HANA | 120.0° | 120.0° |
| NAM | CAN | CAO | HAO | 58.0° | 60.0° |
| NAM | CAN | CAO | HAOA | 62.5° | 60.0° |
| CAN | CAO | CAP | HAO | 120.0° | 120.0° |
| CAN | CAO | CAP | HAOA | 119.4° | 120.0° |
| CAN | CAO | CAP | NAQ | 117.1° | 180.0° |
| CAO | CAN | NAM | HNAM | 179.2° | 56.0° |
| CAO | CAN | HAN | HANA | 120.0° | 120.0° |
| CAN | CAO | HAO | HAOA | 119.5° | 120.0° |
| CAN | CAO | CAP | HAP | 123.0° | 60.0° |
| CAN | CAO | CAP | HAPA | 2.8° | 60.0° |
| CAO | CAP | NAQ | HAP | 120.0° | 120.0° |
| CAO | CAP | NAQ | HAPA | 119.8° | 119.9° |
| CAP | CAO | CAN | HAN | 62.0° | 59.9° |
| CAP | CAO | CAN | HANA | 58.0° | 60.0° |
| CAP | CAO | HAO | HAOA | 119.5° | 119.9° |
| CAO | CAP | HAP | HAPA | 119.8° | 120.0° |
| CAO | CAP | NAQ | HNAQ | 106.5° | 56.1° |
| CAO | CAP | NAQ | HNAA | 133.5° | 179.9° |
| NAQ | CAP | CAO | HAO | 2.9° | 60.0° |
| NAQ | CAP | CAO | HAOA | 123.5° | 60.0° |
| NAQ | CAP | HAP | HAPA | 119.8° | 120.1° |
| CAP | NAQ | HNAQ | HNAA | 120.0° | 124.0° |
| HAB | CAB | HABA | HABB | 120.0° | 120.0° |
| HNAD | NAD | CAE | HAE | 126.2° | 120.0° |
| HNAD | NAD | CAE | HAEA | 113.3° | 120.0° |
| HAE | CAE | CAF | HAF | 176.1° | 180.0° |
| HAE | CAE | CAF | HAFA | 63.6° | 60.0° |
| HAEA | CAE | CAF | HAF | 55.6° | 60.0° |
| HAEA | CAE | CAF | HAFA | 175.9° | 179.9° |
| HAF | CAF | CAG | HAG | 137.2° | 180.0° |
| HAF | CAF | CAG | HAGA | 102.3° | 60.0° |
| HAFA | CAF | CAG | HAG | 17.0° | 60.0° |
| HAFA | CAF | CAG | HAGA | 137.5° | 180.0° |
| HAG | CAG | NAH | HNAH | 112.1° | 176.1° |
| HAGA | CAG | NAH | HNAH | 127.4° | 64.0° |
| HNAH | NAH | CAI | HAI | 143.1° | 176.1° |
| HNAH | NAH | CAI | HAIA | 97.2° | 63.9° |
| HAI | CAI | CAJ | HAJ | 98.9° | 180.0° |
| HAI | CAI | CAJ | HAJA | 140.2° | 60.0° |
| HAIA | CAI | CAJ | HAJ | 20.8° | 60.0° |
| HAIA | CAI | CAJ | HAJA | 100.1° | 180.0° |
| HAJ | CAJ | CAK | HAK | 161.7° | 180.0° |
| HAJ | CAJ | CAK | HAKA | 77.2° | 60.0° |
| HAJA | CAJ | CAK | HAK | 40.7° | 60.0° |
| HAJA | CAJ | CAK | HAKA | 161.9° | 180.0° |
| HAK | CAK | CAL | HAL | 7.0° | 180.0° |
| HAK | CAK | CAL | HALA | 126.9° | 60.0° |
| HAKA | CAK | CAL | HAL | 114.1° | 60.0° |
| HAKA | CAK | CAL | HALA | 5.7° | 180.0° |
| HAL | CAL | NAM | HNAM | 162.1° | 176.0° |
| HALA | CAL | NAM | HNAM | 42.2° | 64.0° |
| HNAM | NAM | CAN | HAN | 59.2° | 176.0° |
| HNAM | NAM | CAN | HANA | 60.8° | 64.0° |
| HAN | CAN | CAO | HAO | 178.0° | 180.0° |
| HAN | CAN | CAO | HAOA | 57.5° | 60.0° |
| HANA | CAN | CAO | HAO | 62.0° | 60.0° |
| HANA | CAN | CAO | HAOA | 177.5° | 180.0° |
| HAO | CAO | CAP | HAP | 117.1° | 180.0° |
| HAO | CAO | CAP | HAPA | 122.7° | 60.0° |
| HAOA | CAO | CAP | HAP | 3.5° | 60.0° |
| HAOA | CAO | CAP | HAPA | 116.7° | 180.0° |
| HAP | CAP | NAQ | HNAQ | 13.5° | 63.9° |
| HAP | CAP | NAQ | HNAA | 106.5° | 60.1° |
| HAPA | CAP | NAQ | HNAQ | 133.7° | 176.0° |
| HAPA | CAP | NAQ | HNAA | 13.7° | 60.0° |
