Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

SOD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C5sing1.50Å1.58Å
C1C4sing1.52Å1.59Å
C1C3sing1.58Å1.64Å
C1C2sing1.56Å1.56Å
C2C7sing1.56Å1.62Å
C2C6sing1.56Å1.55Å
C2C8sing1.55Å1.57Å
C3C10sing1.57Å1.57Å
C3C11sing1.50Å1.55Å
C3C9sing1.54Å1.58Å
C4C12doub1.34Å1.40Å
C4C13sing1.48Å1.54Å
C5O14sing1.36Å1.27Å
C5O15doub1.22Å1.26Å
C6C12sing1.52Å1.51Å
C6H6sing1.09Å1.10Å
C6C10sing1.55Å1.55Å
C7C16sing1.52Å1.54Å
C7H71sing1.10Å1.10Å
C7H72sing1.10Å1.10Å
C8H81sing1.08Å1.10Å
C8H82sing1.08Å1.10Å
C8O17sing1.41Å1.42Å
C9H9sing1.10Å1.10Å
C9C18sing1.52Å1.56Å
C9C16sing1.53Å1.55Å
C10H101sing1.09Å1.10Å
C10H102sing1.10Å1.10Å
C11H11sing1.10Å1.08Å
C11O19doub1.23Å1.23Å
C12H12sing1.08Å1.08Å
C13H13sing1.10Å1.10Å
C13C20sing1.53Å1.53Å
C13C21sing1.53Å1.53Å
O14H14sing0.98Å0.95Å
C16C22sing1.54Å1.56Å
C16H16sing1.10Å1.10Å
O17C52sing1.42Å1.41Å
C18H181sing1.10Å1.10Å
C18H182sing1.09Å1.10Å
C18C24sing1.55Å1.57Å
C20H201sing1.10Å1.10Å
C20H202sing1.10Å1.10Å
C20H203sing1.10Å1.10Å
C21H211sing1.10Å1.10Å
C21H212sing1.10Å1.10Å
C21H213sing1.09Å1.10Å
C22C24sing1.57Å1.59Å
C22H22sing1.10Å1.10Å
C22C25sing1.53Å1.55Å
C24H24sing1.10Å1.10Å
C24CL5sing1.78Å1.68Å
C25H251sing1.09Å1.10Å
C25H252sing1.09Å1.10Å
C25H253sing1.09Å1.10Å
C52H52sing1.10Å1.10Å
C52O56sing1.43Å1.46Å
C52C53sing1.54Å1.54Å
C53C54sing1.52Å1.51Å
C53H531sing1.10Å1.10Å
C53H532sing1.10Å1.10Å
C54C64sing1.49Å1.47Å
C54C55sing1.52Å1.50Å
C54H54sing1.10Å1.10Å
C55C56sing1.52Å1.54Å
C55H55sing1.10Å1.10Å
C55O64sing1.43Å1.43Å
C56O56sing1.44Å1.44Å
C56H56sing1.10Å1.10Å
C56C61sing1.52Å1.51Å
C61H611sing1.09Å1.10Å
C61H612sing1.09Å1.10Å
C61H613sing1.09Å1.10Å
O64C65sing1.45Å1.44Å
C65H651sing1.09Å1.10Å
C65H652sing1.09Å1.10Å
C65C64sing1.50Å1.51Å
C64C70doub1.34Å1.33Å
C70H701sing1.08Å1.08Å
C70H702sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5C1C4110.8°112.8°
C5C1C3113.8°117.3°
C5C1C2120.2°114.6°
C1C5O14118.3°110.7°
C1C5O15114.8°125.1°
C4C1C3112.5°109.7°
C4C1C2100.0°100.4°
C1C4C12104.1°106.8°
C1C4C13127.4°125.2°
C3C1C298.6°100.1°
C1C3C10101.3°101.0°
C1C3C11108.2°112.8°
C1C3C9109.0°109.0°
C1C2C7113.9°113.2°
C1C2C689.4°90.8°
C1C2C8117.6°116.3°
C7C2C6119.5°118.2°
C7C2C8102.9°105.7°
C2C7C16114.7°114.9°
C2C7H71107.7°109.6°
C2C7H72106.6°107.6°
C6C2C8114.2°112.7°
C2C6C12102.2°99.9°
C2C6H6114.2°116.0°
C2C6C10108.4°106.1°
C2C8H81107.9°108.6°
C2C8H82106.8°108.6°
C2C8O17114.2°107.5°
C10C3C11112.4°111.5°
C10C3C9113.8°111.6°
C3C10C699.9°102.1°
C3C10H101112.8°114.2°
C3C10H102114.8°111.9°
C11C3C9111.5°110.6°
C3C11H11116.9°115.6°
C3C11O19126.3°123.5°
C3C9H997.8°108.2°
C3C9C18121.8°119.6°
C3C9C16109.8°111.0°
C12C4C13128.5°128.0°
C4C12C6105.4°106.9°
C4C12H12127.3°126.9°
C4C13H13104.9°108.7°
C4C13C20114.2°110.9°
C4C13C21110.8°111.3°
O14C5O15126.8°124.3°
C5O14H14109.5°111.9°
C12C6H6114.6°114.3°
C12C6C10108.0°102.6°
C6C12H12127.3°126.1°
H6C6C10109.0°116.0°
C6C10H101112.8°112.1°
C6C10H102114.7°111.7°
C16C7H71107.8°108.7°
C16C7H72106.5°109.4°
C7C16C9112.2°111.1°
C7C16C22120.7°122.0°
C7C16H1697.1°105.7°
H71C7H72113.6°106.4°
H81C8H82113.3°111.2°
H81C8O17107.9°110.4°
H82C8O17106.8°110.4°
C8O17C52106.0°112.1°
H9C9C18109.7°106.7°
H9C9C16121.7°110.2°
C18C9C1697.9°100.8°
C9C18H181110.6°110.7°
C9C18H182111.4°112.2°
C9C18C24106.0°103.4°
C9C16C22101.6°103.1°
C9C16H16117.7°110.7°
H101C10H102102.3°105.0°
H11C11O19116.8°121.0°
H13C13C20107.5°108.0°
H13C13C21111.1°107.5°
C20C13C21108.3°110.3°
C13C20H201109.5°111.3°
C13C20H202109.5°110.8°
C13C20H203109.5°111.2°
C13C21H211109.5°110.7°
C13C21H212109.5°111.4°
C13C21H213109.5°111.2°
C22C16H16108.5°103.8°
C16C22C24102.7°101.9°
C16C22H22113.7°108.8°
C16C22C25114.0°114.1°
O17C52H52108.9°107.5°
O17C52O56112.3°110.3°
O17C52C53108.0°107.8°
H181C18H182106.8°107.4°
H181C18C24110.7°109.4°
H182C18C24111.4°113.7°
C18C24C22103.9°106.9°
C18C24H24120.4°108.8°
C18C24CL5102.0°110.6°
H201C20H202109.5°107.9°
H201C20H203109.4°107.9°
H202C20H203109.5°107.7°
H211C21H212109.4°107.9°
H211C21H213109.5°107.7°
H212C21H213109.5°107.9°
C24C22H22111.4°108.4°
C24C22C25116.2°116.7°
C22C24H24106.1°109.7°
C22C24CL5117.2°114.9°
H22C22C2599.5°106.7°
C22C25H251109.5°110.6°
C22C25H252109.4°110.6°
C22C25H253109.4°110.6°
H24C24CL5107.9°105.9°
H251C25H252109.4°108.3°
H251C25H253109.5°108.3°
H252C25H253109.5°108.4°
H52C52O56106.4°108.7°
H52C52C53110.8°110.8°
O56C52C53110.5°111.7°
C52O56C56111.9°113.6°
C52C53C54105.9°108.5°
C52C53H531110.7°109.7°
C52C53H532111.4°110.3°
C54C53H531110.7°110.6°
C54C53H532111.5°111.4°
C53C54C64125.0°123.3°
C53C54C55110.1°108.7°
C53C54H5495.2°108.9°
H531C53H532106.7°106.3°
C64C54C5599.4°98.4°
C64C54H54106.7°106.7°
C54C64C65106.7°106.3°
C54C64C70127.1°127.9°
C55C54H54122.6°110.0°
C54C55C56107.3°109.3°
C54C55H55115.0°110.8°
C54C55O64105.1°104.0°
C56C55H55107.0°108.9°
C56C55O64113.4°115.9°
C55C56O56108.9°108.1°
C55C56H56108.5°111.4°
C55C56C61110.8°111.7°
H55C55O64109.1°107.9°
C55O64C65103.1°105.2°
O56C56H56111.1°109.5°
O56C56C61108.3°108.1°
H56C56C61109.2°107.8°
C56C61H611109.5°110.6°
C56C61H612109.5°110.6°
C56C61H613109.4°110.5°
H611C61H612109.5°108.3°
H611C61H613109.5°108.3°
H612C61H613109.5°108.4°
O64C65H651110.8°107.9°
O64C65H652111.7°108.4°
O64C65C64105.5°105.5°
H651C65H652106.4°110.4°
H651C65C64110.8°112.1°
H652C65C64111.7°112.2°
C65C64C70126.1°125.7°
C64C70H701105.1°120.7°
C64C70H702127.5°120.8°
H701C70H702127.4°118.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5C1C4C3128.6°132.8°
C5C1C4C2127.8°122.4°
C5C1C3C2128.4°124.6°
C5C1C2C761.8°65.0°
C5C1C2C6175.9°173.6°
C5C1C2C858.8°57.7°
C5C1C3C10176.8°172.5°
C5C1C3C1164.8°68.4°
C5C1C3C956.6°54.8°
C5C1C4C12164.1°156.7°
C5C1C4C1315.1°25.6°
C1C5O14O15178.4°179.9°
C1C5O14H14178.4°179.9°
C4C1C3C2104.6°105.0°
C4C1C2C7177.0°173.9°
C4C1C2C654.7°52.5°
C4C1C2C862.5°63.5°
C4C1C3C1056.2°57.2°
C4C1C3C1162.2°62.0°
C4C1C3C9176.4°174.8°
C1C4C12C13179.2°177.5°
C4C1C5O14111.4°60.1°
C4C1C5O1567.2°120.0°
C1C4C12C61.2°2.0°
C1C4C12H12178.8°177.2°
C1C4C13H1328.5°2.9°
C1C4C13C20145.9°115.6°
C1C4C13C2191.5°121.2°
C3C1C2C762.2°61.5°
C3C1C2C660.1°60.0°
C3C1C2C8177.2°175.9°
C1C3C10C11115.3°120.1°
C1C3C10C9116.8°115.7°
C1C3C11C9119.9°122.3°
C3C1C4C1267.3°70.5°
C3C1C4C13113.5°107.1°
C3C1C5O14120.8°171.0°
C3C1C5O1560.6°8.9°
C1C3C10C612.5°13.3°
C1C3C9H959.2°53.1°
C1C3C9C18178.2°175.3°
C1C3C9C1668.6°68.0°
C1C3C10H101107.5°134.6°
C1C3C10H102135.8°106.3°
C1C3C11H1170.7°67.1°
C1C3C11O19109.3°112.8°
C1C2C7C6103.7°104.4°
C1C2C7C8128.5°128.4°
C1C2C6C8120.2°119.1°
C2C1C3C1048.4°47.9°
C2C1C3C11166.8°167.0°
C2C1C3C971.8°69.8°
C2C1C4C1236.3°34.3°
C2C1C4C13142.9°148.1°
C2C1C5O144.4°54.0°
C2C1C5O15177.0°125.9°
C1C2C6C1257.4°53.5°
C1C2C6H6178.3°176.9°
C1C2C6C1056.5°52.8°
C1C2C7C1651.4°51.6°
C1C2C7H7168.6°174.3°
C1C2C7H72169.1°70.4°
C1C2C8H8160.8°53.5°
C1C2C8H8261.3°67.5°
C1C2C8O17179.2°173.0°
C7C2C6C8122.4°123.8°
C7C2C6C12174.7°170.6°
C7C2C6H660.9°66.1°
C7C2C6C1060.9°64.3°
C2C7C16H71120.0°123.2°
C2C7C16H72117.7°121.1°
C2C7H71H72117.8°116.0°
C7C2C8H8165.3°180.0°
C7C2C8H82172.6°59.0°
C7C2C8O1754.7°60.5°
C2C7C16C940.5°42.2°
C2C7C16C22160.2°164.0°
C2C7C16H1683.3°78.1°
C2C6C10C327.6°25.4°
C2C6C12C438.8°37.4°
C2C6C12H6124.1°124.5°
C2C6C12C10114.2°109.1°
C2C6H6C10121.4°125.4°
C6C2C7C1652.3°52.7°
C6C2C7H71172.3°69.9°
C6C2C7H7265.4°174.8°
C6C2C8H81163.6°49.4°
C6C2C8H8241.5°170.5°
C6C2C8O1776.4°70.1°
C2C6C10H101147.6°97.3°
C2C6C10H10295.7°145.1°
C2C6C12H12141.2°147.3°
C8C2C6C1262.8°65.6°
C8C2C6H661.5°57.8°
C8C2C6C10176.7°171.9°
C8C2C7C16179.9°180.0°
C8C2C7H7159.9°57.3°
C8C2C7H7262.5°58.0°
C2C8H81H82118.0°119.4°
C2C8H81O17123.9°117.7°
C2C8H82O17122.6°117.7°
C2C8O17C52179.3°178.4°
C10C3C11C9129.1°124.8°
C3C10C6C1282.4°79.0°
C3C10C6H6152.5°155.7°
C3C10C6H101120.0°122.7°
C3C10C6H102123.3°119.7°
C10C3C9H9171.4°163.8°
C10C3C9C1869.6°73.9°
C10C3C9C1643.6°42.8°
C3C10H101H102123.9°123.0°
C10C3C11H11178.3°180.0°
C10C3C11O191.7°0.1°
C11C3C10C6127.7°133.4°
C11C3C9H960.2°71.5°
C11C3C9C1858.8°50.8°
C11C3C9C16172.0°167.5°
C11C3C10H1017.7°105.4°
C11C3C10H102109.0°13.8°
C3C11H11O19180.0°179.9°
C9C3C10C6104.3°102.4°
C3C9C16C749.5°50.3°
C3C9H9C18127.8°129.9°
C3C9H9C16119.0°121.6°
C3C9C18C16119.2°121.9°
C9C3C10H101135.7°18.8°
C9C3C10H10219.0°138.0°
C9C3C11H1149.2°55.2°
C9C3C11O19130.8°124.9°
C3C9C16C22179.8°177.4°
C3C9C16H1661.9°66.9°
C3C9C18H18141.2°45.7°
C3C9C18H18277.4°74.2°
C3C9C18C24161.2°162.9°
C4C12C6H12180.0°175.3°
C4C12C6H6163.0°161.9°
C4C12C6C1075.4°71.7°
C12C4C13H13152.5°180.0°
C12C4C13C2035.0°61.5°
C12C4C13C2187.6°61.7°
C13C4C12C6179.6°175.6°
C13C4C12H120.4°0.4°
C4C13H13C20121.9°120.3°
C4C13H13C21119.8°120.6°
C4C13C20C21124.0°123.8°
C4C13C20H20147.9°61.7°
C4C13C20H20272.1°58.3°
C4C13C20H203167.9°178.0°
C4C13C21H211121.9°57.6°
C4C13C21H2121.9°62.4°
C4C13C21H213118.1°177.3°
O15C5O14H140.0°0.0°
C12C6H6C10121.1°119.1°
C12C6C10H10137.6°158.3°
C12C6C10H102154.3°40.7°
H6C6C10H10187.4°33.1°
H6C6C10H10229.2°84.5°
H6C6C12H1217.0°22.8°
C6C10H101H102123.8°121.5°
C10C6C12H12104.6°103.6°
C16C7H71H72117.8°117.6°
C7C16C9H963.5°69.5°
C7C16C9C18177.4°178.1°
C7C16C9C22130.3°132.3°
C7C16C9H16111.4°117.2°
C7C16C22H16110.5°118.9°
C7C16C22C24168.1°163.0°
C7C16C22H2271.5°82.7°
C7C16C22C2541.6°36.3°
H71C7C16C979.5°165.4°
H71C7C16C2240.2°72.8°
H71C7C16H16156.7°45.1°
H72C7C16C9158.1°78.9°
H72C7C16C2282.2°42.9°
H72C7C16H1634.3°160.8°
H81C8H82O17118.7°122.9°
H81C8O17C5260.7°60.0°
H82C8O17C5261.4°63.3°
C8O17C52H523.4°60.5°
C8O17C52O56114.1°57.8°
C8O17C52C53123.8°180.0°
H9C9C18C16127.8°115.1°
H9C9C16C2266.8°62.8°
H9C9C16H16174.9°173.2°
H9C9C18H181154.2°168.8°
H9C9C18H18235.6°48.8°
H9C9C18C2485.8°74.1°
C18C9C16C2252.3°49.6°
C18C9C16H1666.1°60.8°
C9C18H181H182121.4°122.8°
C9C18H181C24117.1°113.4°
C9C18H182C24118.1°116.9°
C9C18C24C2216.1°18.1°
C9C18C24H24134.6°136.5°
C9C18C24CL5106.1°107.6°
C9C16C22H16124.7°115.5°
C16C9C18H18177.9°76.2°
C16C9C18H182163.4°163.9°
C16C9C18C2442.1°41.0°
C9C16C22C2443.3°37.4°
C9C16C22H22163.7°151.8°
C9C16C22C2583.2°89.2°
H13C13C20C21120.2°117.3°
H13C13C20H20168.0°179.3°
H13C13C20H202172.0°60.6°
H13C13C20H20352.0°59.0°
H13C13C21H211121.9°61.3°
H13C13C21H212118.1°178.6°
H13C13C21H2131.9°58.3°
C13C20H201H202120.0°121.7°
C13C20H201H203120.0°122.2°
C13C20H202H203120.0°121.8°
C20C13C21H2114.0°178.9°
C20C13C21H212124.0°61.1°
C20C13C21H213116.0°59.2°
C21C13C20H201171.8°62.1°
C21C13C20H20251.8°177.9°
C21C13C20H20368.2°58.2°
C13C21H211H212120.0°122.1°
C13C21H211H213120.0°121.7°
C13C21H212H213120.0°122.3°
C16C22C24C1816.4°11.7°
C16C22C24H22122.0°114.6°
C16C22C24C25125.1°125.0°
C16C22H22C25121.5°123.5°
C16C22C24H24111.5°106.1°
C16C22C24CL5127.9°134.8°
C16C22C25H2517.0°100.1°
C16C22C25H252127.0°139.9°
C16C22C25H253113.0°19.8°
H16C16C22C2481.4°78.1°
H16C16C22H2239.0°36.2°
H16C16C22C25152.1°155.2°
O17C52H52O56121.2°119.3°
O17C52H52C53118.7°117.5°
O17C52O56C53120.7°119.8°
O17C52C53C54178.1°176.1°
O17C52C53H53158.1°55.2°
O17C52C53H53260.5°61.6°
O17C52O56C56178.7°177.8°
H181C18H182C24121.0°121.2°
H181C18C24C22103.8°99.9°
H181C18C24H2414.7°18.5°
H181C18C24CL5133.9°134.4°
H182C18C24C22137.5°140.0°
H182C18C24H24104.0°101.6°
H182C18C24CL515.2°14.3°
C18C24C22H24127.9°117.8°
C18C24C22CL5111.5°123.1°
C18C24C22H22138.4°126.3°
C18C24C22C25108.7°113.2°
C18C24H24CL5116.2°118.9°
H201C20H202H203120.0°116.2°
H211C21H212H213120.0°116.1°
C24C22H22C25123.0°126.4°
C22C24H24CL5126.4°124.5°
C24C22C25H251126.1°141.3°
C24C22C25H252113.9°21.3°
C24C22C25H2536.1°98.7°
H22C22C24H2410.5°8.5°
H22C22C24CL5110.0°110.6°
H22C22C25H251114.3°20.0°
H22C22C25H2525.7°100.0°
H22C22C25H253125.7°140.0°
C25C22C24H24123.4°128.9°
C25C22C24CL52.9°9.8°
C22C25H251H252120.0°121.4°
C22C25H251H253120.0°121.3°
C22C25H252H253120.0°121.4°
H251C25H252H253120.0°117.2°
H52C52O56C53120.3°122.6°
H52C52C53C5459.0°66.6°
H52C52C53H53161.1°172.5°
H52C52C53H532179.7°55.7°
H52C52O56C5659.7°64.7°
O56C52C53C5458.7°54.8°
O56C52C53H531178.7°66.1°
O56C52C53H53262.7°177.1°
C52O56C56C5560.5°60.0°
C52O56C56H5659.0°61.6°
C52O56C56C61178.9°178.8°
C52C53C54H531120.0°120.4°
C52C53C54H532121.3°121.6°
C52C53H531H532121.4°119.3°
C52C53C54C64179.5°170.8°
C52C53C54C5561.6°56.7°
C52C53C54H5465.9°63.1°
C53C52O56C5660.7°57.9°
C54C53H531H532121.5°121.1°
C53C54C64C55122.8°119.0°
C53C54C64H54109.0°127.1°
C53C54C55H54110.4°119.2°
C53C54C55C5663.2°61.2°
C53C54C55H5555.8°58.7°
C53C54C55O64175.8°174.4°
C53C54C64C65148.0°151.5°
C53C54C64C7036.1°24.0°
H531C53C54C6460.4°50.4°
H531C53C54C55178.4°63.6°
H531C53C54H5454.1°176.5°
H532C53C54C6458.2°67.6°
H532C53C54C5559.7°178.3°
H532C53C54H54172.8°58.5°
C64C54C55H54116.8°111.3°
C64C54C55C56164.0°169.2°
C64C54C55H5577.0°70.8°
C64C54C55O6443.0°44.9°
C54C64C65O640.3°9.9°
C54C64C65H651120.3°107.3°
C54C64C65H652121.2°127.8°
C54C64C65C70175.9°175.6°
C54C64C70H7012.5°5.4°
C54C64C70H702177.5°174.7°
C54C55C56H55124.0°121.1°
C54C55C56O64115.6°117.0°
C54C55H55O64117.8°113.3°
C54C55C56O5660.8°61.1°
C54C55C56H5660.3°59.3°
C54C55C56C61179.8°180.0°
C54C55O64C6544.2°40.7°
C55C54C64C6525.3°32.4°
C55C54C64C70158.9°143.0°
H54C54C55C5647.1°57.9°
H54C54C55H55166.1°177.9°
H54C54C55O6473.8°66.4°
H54C54C64C65103.0°81.5°
H54C54C64C7072.9°103.1°
C56C55H55O64123.0°126.6°
C55C56O56H56119.5°121.6°
C55C56O56C61120.6°121.1°
C55C56H56C61120.9°123.0°
C55C56C61H61169.1°22.4°
C55C56C61H61250.9°97.6°
C55C56C61H613170.9°142.4°
C56C55O64C65161.1°160.6°
H55C55C56O5663.2°60.0°
H55C55C56H56175.7°179.5°
H55C55C56C6155.8°58.8°
H55C55O64C6579.7°77.1°
O64C55C56O56176.4°178.1°
O64C55C56H5655.3°57.7°
O64C55C56C6164.6°63.0°
C55O64C65H65193.5°139.1°
C55O64C65H652148.0°101.3°
C55O64C65C6426.5°19.1°
O56C56H56C61119.4°117.4°
O56C56C61H611171.5°141.3°
O56C56C61H61268.5°21.3°
O56C56C61H61351.5°98.8°
H56C56C61H61150.4°100.4°
H56C56C61H612170.4°139.6°
H56C56C61H61369.6°19.6°
C56C61H611H612120.0°121.3°
C56C61H611H613120.0°121.3°
C56C61H612H613120.0°121.3°
H611C61H612H613120.0°117.4°
O64C65H651H652121.6°118.3°
O64C65H651C64116.7°115.8°
O64C65H652C64117.8°116.2°
O64C65C64C70176.2°165.7°
H651C65H652C64121.1°125.9°
H651C65C64C7063.8°77.1°
H652C65C64C7054.7°47.8°
C65C64C70H701177.6°180.0°
C65C64C70H7022.4°0.1°
C64C70H701H702180.0°180.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon