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SOA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C4C3doub1.39Å1.42ÅAromatic
C4C5sing1.38Å1.42ÅAromatic
C4C12sing1.51Å1.56Å
C3C2sing1.39Å1.42ÅAromatic
C3N11sing1.40Å1.36Å
C2C1doub1.38Å1.42ÅAromatic
C2H2sing1.08Å1.10Å
C1C6sing1.38Å1.41ÅAromatic
C1H1sing1.08Å1.10Å
C5C6doub1.38Å1.42ÅAromatic
C5H5sing1.08Å1.10Å
C6H6sing1.08Å1.10Å
N11HNB1sing0.97Å1.02Å
N11HNB2sing0.97Å1.02Å
C12O1sing1.43Å1.42Å
C12H121sing1.09Å1.11Å
C12H122sing1.09Å1.12Å
O1HO1sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C3C4C5119.4°120.0°
C3C4C12121.1°120.0°
C4C3C2120.0°119.8°
C4C3N11120.5°120.1°
C5C4C12119.5°120.0°
C4C5C6120.3°120.1°
C4C5H5119.9°120.0°
C4C12O1126.5°109.5°
C4C12H121106.2°109.5°
C4C12H122106.2°109.5°
C2C3N11119.5°120.1°
C3C2C1120.2°120.0°
C3C2H2120.0°120.1°
C3N11HNB1120.5°120.0°
C3N11HNB2108.2°120.0°
C1C2H2119.8°120.0°
C2C1C6120.2°120.0°
C2C1H1120.2°120.0°
C6C1H1119.6°120.0°
C1C6C5119.9°120.2°
C1C6H6119.6°119.9°
C6C5H5119.8°120.0°
C5C6H6120.5°119.9°
HNB1N11HNB2108.2°120.0°
O1C12H121106.2°109.4°
O1C12H122106.2°109.5°
C12O1HO1126.5°106.9°
H121C12H122103.3°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C3C4C5C12179.3°179.5°
C4C3C2N11179.9°179.7°
C4C3C2C10.3°0.3°
C4C3C2H2179.7°179.8°
C3C4C5C60.5°0.5°
C3C4C5H5179.5°179.8°
C4C3N11HNB1180.0°179.7°
C4C3N11HNB254.8°0.6°
C3C4C12O14.1°179.5°
C3C4C12H121121.2°60.5°
C3C4C12H122129.3°59.5°
C5C4C3C20.1°0.5°
C5C4C3N11179.7°179.8°
C4C5C6C10.5°0.3°
C4C5C6H5180.0°179.7°
C4C5C6H6179.5°179.8°
C5C4C12O1176.6°0.1°
C5C4C12H12158.1°120.0°
C5C4C12H12251.4°120.0°
C12C4C3C2179.4°180.0°
C12C4C3N110.4°0.3°
C12C4C5C6179.8°180.0°
C12C4C5H50.2°0.3°
C4C12O1H121125.3°120.0°
C4C12O1H122125.2°120.1°
C4C12H121H122111.6°120.0°
C4C12O1HO1180.0°180.0°
C3C2C1H2180.0°180.0°
C3C2C1C60.3°0.0°
C3C2C1H1179.7°180.0°
C2C3N11HNB10.2°0.0°
C2C3N11HNB2125.4°179.7°
N11C3C2C1179.9°180.0°
N11C3C2H20.1°0.0°
C3N11HNB1HNB2125.2°179.7°
C2C1C6H1180.0°179.9°
C2C1C6C50.1°0.0°
C2C1C6H6179.8°180.0°
H2C2C1C6179.7°180.0°
H2C2C1H10.3°0.1°
C1C6C5H6180.0°180.0°
C1C6C5H5179.5°180.0°
H1C1C6C5179.9°180.0°
H1C1C6H60.1°0.1°
H5C5C6H60.5°0.0°
O1C12H121H122111.6°120.0°
H121C12O1HO154.8°60.0°
H122C12O1HO154.7°60.0°

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PDB entries from 2024-07-10

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