Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

SNV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C6C7doub1.38Å1.39ÅAromatic
C6C5sing1.39Å1.42ÅAromatic
N2C5sing1.40Å1.38Å
C7C8sing1.38Å1.39ÅAromatic
C5C4doub1.40Å1.43ÅAromatic
C8C9doub1.38Å1.40ÅAromatic
C4C9sing1.39Å1.40ÅAromatic
C4N1sing1.40Å1.47Å
N1C10sing1.47Å1.51Å
N1C3sing1.47Å1.50Å
C10C11sing1.53Å1.56Å
C11Nsing1.47Å1.51Å
C3C2sing1.53Å1.55Å
C2Nsing1.47Å1.50Å
NC1sing1.47Å1.51Å
C1Csing1.53Å1.56Å
COsing1.43Å1.41Å
C6H1sing1.08Å1.08Å
C7H2sing1.08Å1.08Å
C8H3sing1.08Å1.08Å
C10H4sing1.09Å1.10Å
C10H5sing1.09Å1.10Å
CH7sing1.09Å1.10Å
CH8sing1.09Å1.10Å
OH9sing0.97Å0.95Å
C1H10sing1.09Å1.10Å
C1H11sing1.09Å1.10Å
C11H12sing1.09Å1.10Å
C11H13sing1.09Å1.10Å
C2H14sing1.09Å1.10Å
C2H15sing1.09Å1.10Å
C3H16sing1.09Å1.10Å
C3H17sing1.09Å1.10Å
C9H18sing1.08Å1.08Å
N2H19sing0.97Å1.00Å
N2H20sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C7C6C5120.3°120.0°
C6C7C8120.7°120.2°
C7C6H1119.8°120.0°
C6C7H2119.6°119.9°
C6C5N2119.5°120.1°
C6C5C4119.0°119.8°
C5C6H1119.8°120.0°
N2C5C4121.5°120.1°
C5N2H19109.5°120.0°
C5N2H20109.4°120.0°
C7C8C9119.7°120.2°
C8C7H2119.7°119.9°
C7C8H3120.1°119.9°
C5C4C9119.1°119.8°
C5C4N1117.9°120.1°
C8C9C4121.2°120.0°
C9C8H3120.1°119.8°
C8C9H18119.4°120.1°
C9C4N1123.1°120.1°
C4C9H18119.4°119.9°
C4N1C10114.0°111.0°
C4N1C3112.0°111.0°
C10N1C3108.5°110.9°
N1C10C11106.6°109.4°
N1C10H4110.2°109.5°
N1C10H5110.1°109.5°
N1C3C2108.4°109.4°
N1C3H16109.7°109.5°
N1C3H17109.8°109.5°
C10C11N111.1°109.4°
C11C10H4110.2°109.5°
C11C10H5110.2°109.5°
C10C11H12109.0°109.5°
C10C11H13109.0°109.5°
C11NC2112.1°110.9°
C11NC1109.9°111.0°
NC11H12109.1°109.5°
NC11H13109.1°109.5°
C3C2N112.4°109.4°
C3C2H14108.7°109.5°
C3C2H15108.8°109.5°
C2C3H16109.8°109.5°
C2C3H17109.7°109.4°
C2NC1108.6°111.0°
NC2H14108.8°109.5°
NC2H15108.7°109.5°
NC1C111.0°109.5°
NC1H10109.1°109.4°
NC1H11109.1°109.4°
C1CO111.6°109.5°
C1CH7109.0°109.5°
C1CH8109.0°109.4°
CC1H10109.1°109.5°
CC1H11109.1°109.5°
OCH7108.9°109.4°
OCH8108.9°109.5°
COH9109.5°114.0°
H4C10H5109.5°109.5°
H7CH8109.5°109.5°
H10C1H11109.5°109.5°
H12C11H13109.5°109.5°
H14C2H15109.4°109.5°
H16C3H17109.4°109.5°
H19N2H20109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C7C6C5H1180.0°179.9°
C7C6C5N2178.7°180.0°
C6C7C8H2180.0°180.0°
C7C6C5C40.3°0.1°
C6C7C8C90.3°0.0°
C6C7C8H3179.7°180.0°
C6C5N2C4179.0°180.0°
C5C6C7C80.1°0.0°
C6C5C4C90.4°0.1°
C6C5C4N1179.7°179.7°
C5C6C7H2179.9°180.0°
C6C5N2H19180.0°180.0°
C6C5N2H2060.0°0.0°
N2C5C4C9178.5°180.0°
N2C5C4N11.3°0.2°
N2C5C6H11.3°0.0°
C5N2H19H20120.0°180.0°
C7C8C9H3180.0°179.9°
C7C8C9C40.1°0.1°
C8C7C6H1179.9°180.0°
C7C8C9H18179.9°179.7°
C5C4C9C80.2°0.0°
C5C4C9N1179.9°179.8°
C5C4N1C1073.9°119.7°
C5C4N1C3162.5°116.5°
C4C5C6H1179.7°180.0°
C5C4C9H18179.8°179.8°
C4C5N2H191.1°0.1°
C4C5N2H20121.0°180.0°
C8C9C4H18180.0°179.8°
C8C9C4N1179.9°179.8°
C9C8C7H2179.7°179.9°
C9C4N1C10106.3°60.1°
C9C4N1C317.4°63.8°
C4C9C8H3179.9°180.0°
C4N1C10C3125.5°123.9°
C4N1C10C11167.6°176.8°
C4N1C3C2168.8°176.8°
C4N1C10H472.9°63.2°
C4N1C10H548.0°56.8°
C4N1C3H1648.9°56.9°
C4N1C3H1771.4°63.2°
N1C4C9H180.1°0.0°
N1C10C11H4119.6°120.0°
N1C10C11H5119.5°120.0°
N1C10C11N60.6°58.4°
C10N1C3C264.5°59.3°
N1C10H4H5121.3°120.0°
N1C10C11H12179.1°178.3°
N1C10C11H1359.6°61.6°
C10N1C3H16175.6°179.2°
C10N1C3H1755.3°60.7°
C3N1C10C1166.9°59.3°
N1C3C2H16119.9°120.0°
N1C3C2H17119.9°120.0°
N1C3C2N55.4°58.4°
C3N1C10H452.6°60.7°
C3N1C10H5173.5°179.3°
N1C3C2H1465.0°178.4°
N1C3C2H15175.9°61.6°
N1C3H16H17120.5°120.1°
C10C11NH12120.2°119.9°
C10C11NH13120.2°120.0°
C10C11NC252.7°59.3°
C10C11NC1173.6°176.8°
C11C10H4H5121.3°120.1°
C10C11H12H13119.2°120.1°
C11NC2C350.0°59.3°
C11NC2C1121.6°123.9°
C11NC1C77.1°170.0°
NC11C10H458.9°61.6°
NC11C10H5179.8°178.4°
C11NC1H1043.1°50.0°
C11NC1H11162.6°70.0°
NC11H12H13119.3°120.0°
C11NC2H1470.5°179.3°
C11NC2H15170.4°60.7°
C3C2NH14120.4°120.0°
C3C2NH15120.5°120.0°
C3C2NC1171.6°176.8°
C3C2H14H15118.7°120.0°
C2C3H16H17120.5°120.0°
C2NC1C159.9°66.2°
C2NC1H1079.9°173.8°
C2NC1H1139.7°53.8°
C2NC11H12172.9°179.2°
C2NC11H1367.5°60.7°
NC2H14H15118.7°120.0°
NC2C3H16175.3°178.4°
NC2C3H1764.4°61.6°
NC1CH10120.2°120.0°
NC1CH11120.2°120.0°
NC1CO53.5°65.0°
NC1CH766.8°55.0°
NC1CH8173.9°175.0°
NC1H10H11119.3°120.0°
C1NC11H1266.2°56.9°
C1NC11H1353.4°63.2°
C1NC2H1451.1°56.9°
C1NC2H1568.0°63.2°
C1COH7120.3°120.0°
C1COH8120.3°120.0°
C1CH7H8119.1°120.0°
C1COH9180.0°180.0°
CC1H10H11119.3°120.1°
OCH7H8119.0°120.0°
OCC1H10173.8°55.0°
OCC1H1166.7°175.0°
H1C6C7H20.1°0.1°
H2C7C8H30.3°0.0°
H3C8C9H180.1°0.2°
H4C10C11H1261.3°58.4°
H4C10C11H13179.2°178.4°
H5C10C11H1259.6°61.7°
H5C10C11H1359.9°58.4°
H7COH959.7°60.0°
H7CC1H1053.5°174.9°
H7CC1H11173.0°65.0°
H8COH959.6°60.0°
H8CC1H1065.9°65.0°
H8CC1H1153.6°55.1°
H14C2C3H1654.8°61.6°
H14C2C3H17175.1°58.4°
H15C2C3H1664.3°58.4°
H15C2C3H1756.0°178.4°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon