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SNG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing0.00Å1.53Å
C1O5sing0.00Å1.47Å
C1SEsing0.00Å1.86Å
C1H1sing0.00Å1.10Å
C2C3sing0.00Å1.55Å
C2N2sing0.00Å1.48Å
C2H2sing0.00Å1.10Å
C3C4sing0.00Å1.54Å
C3O3sing0.00Å1.45Å
C3H3sing0.00Å1.10Å
C4C5sing0.00Å1.54Å
C4O4sing0.00Å1.42Å
C4H4sing0.00Å1.10Å
C5C6sing0.00Å1.55Å
C5O5sing0.00Å1.44Å
C5H5sing0.00Å1.10Å
C6O6sing0.00Å1.40Å
C6H61sing0.00Å1.10Å
C6H62sing0.00Å1.10Å
C7C8sing0.00Å1.50Å
C7N2sing0.00Å1.32Å
C7O7doub0.00Å1.27Å
C8H81sing0.00Å1.10Å
C8H82sing0.00Å1.10Å
C8H83sing0.00Å1.10Å
CMSEsing0.00Å1.81Å
CMHMC1sing0.00Å1.10Å
CMHMC2sing0.00Å1.10Å
CMHMC3sing0.00Å1.10Å
N2HN2sing0.00Å0.99Å
O3HO3sing0.00Å0.99Å
O4HO4sing0.00Å0.99Å
O6HO6sing0.00Å0.99Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O5107.2°90.0°
C2C1SE111.6°90.0°
C2C1H1109.8°90.0°
C1C2C3109.8°90.0°
C1C2N2110.2°90.0°
C1C2H2108.3°90.0°
O5C1SE110.1°90.0°
O5C1H1111.3°90.0°
C1O5C5112.8°90.0°
SEC1H1106.9°90.0°
C1SECM100.0°90.0°
C3C2N2108.0°90.0°
C3C2H2110.4°90.0°
C2C3C4111.6°90.0°
C2C3O3109.2°90.0°
C2C3H3108.3°90.0°
N2C2H2110.1°90.0°
C2N2C7124.4°90.0°
C2N2HN2117.8°90.0°
C4C3O3109.7°90.0°
C4C3H3107.8°90.0°
C3C4C5109.1°90.0°
C3C4O4108.6°90.0°
C3C4H4110.3°90.0°
O3C3H3110.3°90.0°
C3O3HO3109.5°90.0°
C5C4O4109.5°90.0°
C5C4H4109.4°90.0°
C4C5C6111.4°90.0°
C4C5O5107.5°90.0°
C4C5H5109.3°90.0°
O4C4H4109.9°90.0°
C4O4HO4109.5°90.0°
C6C5O5108.7°90.0°
C6C5H5108.0°90.0°
C5C6O6109.0°90.0°
C5C6H61109.6°90.0°
C5C6H62109.7°90.0°
O5C5H5111.9°90.0°
O6C6H61109.6°90.0°
O6C6H62109.8°90.0°
C6O6HO6109.5°90.0°
H61C6H62109.1°90.0°
C8C7N2115.2°90.0°
C8C7O7121.0°90.0°
C7C8H81109.5°90.0°
C7C8H82109.5°90.0°
C7C8H83109.5°90.0°
N2C7O7123.6°90.0°
C7N2HN2117.8°90.0°
H81C8H82109.5°90.0°
H81C8H83109.4°90.0°
H82C8H83109.5°90.0°
SECMHMC1109.5°90.0°
SECMHMC2109.5°90.0°
SECMHMC3109.4°90.0°
HMC1CMHMC2109.5°90.0°
HMC1CMHMC3109.4°90.0°
HMC2CMHMC3109.5°90.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1O5SE121.5°90.0°
C2C1O5H1120.1°90.0°
C2C1SEH1120.0°90.0°
C1C2C3N2120.2°90.0°
C1C2C3H2119.4°90.0°
C1C2N2H2119.4°90.0°
C1C2C3C452.8°90.0°
C1C2C3O3174.2°90.0°
C1C2C3H365.7°90.0°
C2C1O5C566.5°90.0°
C1C2N2C7117.1°90.0°
C2C1SECM57.2°90.0°
C1C2N2HN262.9°90.0°
O5C1SEH1121.1°90.0°
O5C1C2C356.2°90.0°
O5C1C2N2175.1°90.0°
O5C1C2H264.4°90.0°
C1O5C5C467.6°90.0°
C1O5C5C6171.6°90.0°
C1O5C5H552.3°90.0°
O5C1SECM61.7°90.0°
SEC1C2C3176.9°90.0°
SEC1C2N264.3°90.0°
SEC1C2H256.2°90.0°
SEC1O5C5172.0°90.0°
C1SECMHMC13.3°90.0°
C1SECMHMC2116.7°90.0°
C1SECMHMC3123.3°90.0°
H1C1C2C364.8°90.0°
H1C1C2N254.0°90.0°
H1C1C2H2174.5°90.0°
H1C1O5C553.6°90.0°
H1C1SECM177.3°90.0°
C3C2N2H2120.6°90.0°
C2C3C4O3121.1°90.0°
C2C3C4H3118.8°90.0°
C2C3O3H3118.9°90.0°
C2C3C4C553.3°90.0°
C2C3C4O4172.6°90.0°
C2C3C4H466.9°90.0°
C3C2N2C7122.9°90.0°
C3C2N2HN257.1°90.0°
C2C3O3HO3179.4°90.0°
N2C2C3C4173.0°90.0°
N2C2C3O365.6°90.0°
N2C2C3H354.5°90.0°
C2N2C7C81.2°90.0°
C2N2C7HN2180.0°90.0°
C2N2C7O7174.1°90.0°
H2C2C3C466.6°90.0°
H2C2C3O354.9°90.0°
H2C2C3H3175.0°90.0°
H2C2N2C72.3°90.0°
H2C2N2HN2177.7°90.0°
C4C3O3H3118.6°90.0°
C3C4C5O4118.7°90.0°
C3C4C5H4120.8°90.0°
C3C4O4H4120.8°90.0°
C3C4C5C6177.6°90.0°
C3C4C5O558.5°90.0°
C3C4C5H563.1°90.0°
C4C3O3HO356.9°90.0°
C3C4O4HO475.8°90.0°
O3C3C4C5174.4°90.0°
O3C3C4O466.3°90.0°
O3C3C4H454.2°90.0°
H3C3C4C565.5°90.0°
H3C3C4O453.8°90.0°
H3C3C4H4174.3°90.0°
H3C3O3HO361.7°90.0°
C5C4O4H4120.2°90.0°
C4C5C6O5118.3°90.0°
C4C5C6H5120.0°90.0°
C4C5O5H5120.0°90.0°
C4C5C6O662.6°90.0°
C4C5C6H61177.4°90.0°
C4C5C6H6257.6°90.0°
C5C4O4HO4165.1°90.0°
O4C4C5C663.7°90.0°
O4C4C5O5177.3°90.0°
O4C4C5H555.6°90.0°
H4C4C5C656.8°90.0°
H4C4C5O562.2°90.0°
H4C4C5H5176.1°90.0°
H4C4O4HO444.9°90.0°
C6C5O5H5119.3°90.0°
C5C6O6H61119.9°90.0°
C5C6O6H62120.2°90.0°
C5C6H61H62120.2°90.0°
C5C6O6HO6117.4°90.0°
O5C5C6O655.7°90.0°
O5C5C6H6164.2°90.0°
O5C5C6H62175.9°90.0°
H5C5C6O6177.3°90.0°
H5C5C6H6157.4°90.0°
H5C5C6H6262.4°90.0°
O6C6H61H62120.2°90.0°
H61C6O6HO6122.7°90.0°
H62C6O6HO62.8°90.0°
C8C7N2O7175.4°90.0°
C7C8H81H82120.0°90.0°
C7C8H81H83120.0°90.0°
C7C8H82H83120.0°90.0°
C8C7N2HN2178.8°90.0°
N2C7C8H8156.7°90.0°
N2C7C8H82176.8°90.0°
N2C7C8H8363.2°90.0°
O7C7C8H81118.8°90.0°
O7C7C8H821.3°90.0°
O7C7C8H83121.3°90.0°
O7C7N2HN25.9°90.0°
H81C8H82H83120.0°90.0°
SECMHMC1HMC2120.0°90.0°
SECMHMC1HMC3120.0°90.0°
SECMHMC2HMC3120.0°90.0°
HMC1CMHMC2HMC3120.0°90.0°

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PDB entries from 2024-07-17

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