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SN3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.55Å
C1C6sing1.53Å1.56Å
C1O46sing1.43Å1.44Å
C1H1sing1.09Å1.10Å
C2C3sing1.53Å1.53Å
C2H21sing1.09Å1.10Å
C2H22sing1.09Å1.10Å
C3C4sing1.54Å1.54Å
C3C10sing1.56Å1.54Å
C3H3sing1.09Å1.10Å
C4C5sing1.51Å1.55Å
C4N8sing1.47Å1.49Å
C4H4sing1.09Å1.10Å
C5C6sing1.53Å1.53Å
C5H51sing1.09Å1.10Å
C5H52sing1.09Å1.10Å
C6O7sing1.43Å1.44Å
C6H6sing1.09Å1.10Å
O7HO7sing0.97Å0.95Å
N8C9sing1.47Å1.46Å
N8C24sing1.35Å1.35Å
C9C10sing1.55Å1.54Å
C9C11sing1.51Å1.51Å
C9H9sing1.09Å1.10Å
C10H101sing1.09Å1.10Å
C10H102sing1.09Å1.10Å
C11N12sing1.35Å1.36Å
C11O23doub1.21Å1.23Å
N12C13sing1.47Å1.47Å
N12HN12sing0.97Å1.00Å
C13C14sing1.53Å1.52Å
C13H131sing1.09Å1.10Å
C13H132sing1.09Å1.10Å
C14C15sing1.51Å1.51Å
C14H141sing1.09Å1.10Å
C14H142sing1.09Å1.10Å
C15C16sing1.51Å1.49Å
C15C19doub1.30Å1.31Å
C16N17sing1.47Å1.46Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
N17C18sing1.47Å1.47Å
N17C20sing1.37Å1.31Å
C18C19sing1.51Å1.51Å
C18H181sing1.09Å1.10Å
C18H182sing1.09Å1.10Å
C19H192sing1.08Å1.08Å
C20N21doub1.30Å1.38Å
C20N22sing1.37Å1.37Å
N21HN21sing0.97Å1.00Å
N22H221sing0.97Å1.00Å
N22H222sing0.97Å1.00Å
C24O25doub1.21Å1.21Å
C24C26sing1.51Å1.52Å
C26C27sing1.53Å1.54Å
C26N32sing1.46Å1.46Å
C26H26sing1.09Å1.10Å
C27C28sing1.53Å1.53Å
C27CL31sing1.80Å1.80Å
C27H27sing1.09Å1.10Å
C28C29sing1.53Å1.54Å
C28C30sing1.53Å1.53Å
C28H28sing1.09Å1.10Å
C29H291sing1.09Å1.10Å
C29H292sing1.09Å1.10Å
C29H293sing1.09Å1.10Å
C30H301sing1.09Å1.10Å
C30H302sing1.09Å1.10Å
C30H303sing1.09Å1.10Å
N32C33sing1.35Å1.35Å
N32HN32sing0.97Å1.00Å
C33C34sing1.51Å1.50Å
C33O43doub1.21Å1.22Å
C34O35sing1.43Å1.44Å
C34C37sing1.53Å1.54Å
C34H34sing1.09Å1.10Å
O35C36sing1.43Å1.44Å
C36H361sing1.09Å1.10Å
C36H362sing1.09Å1.10Å
C36H363sing1.09Å1.10Å
C37O38sing1.43Å1.44Å
C37H371sing1.09Å1.10Å
C37H372sing1.09Å1.10Å
O38S39sing1.52Å1.55Å
S39O40sing1.52Å1.42Å
S39O41doub1.42Å1.53Å
S39O42doub1.42Å1.43Å
O40HO40sing0.97Å0.95Å
O46HO46sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6113.2°108.7°
C2C1O46109.2°109.6°
C2C1H1108.1°109.6°
C1C2C3117.5°110.7°
C1C2H21106.9°109.2°
C1C2H22106.9°109.2°
C6C1O46112.2°109.6°
C6C1H1104.8°109.6°
C1C6C5110.5°108.4°
C1C6O7112.7°109.7°
C1C6H6106.1°109.7°
O46C1H1109.1°109.7°
C1O46HO46109.5°114.0°
C3C2H21106.9°109.3°
C3C2H22106.9°109.2°
C2C3C4115.5°110.6°
C2C3C10109.6°106.6°
C2C3H3103.2°112.4°
H21C2H22111.9°109.2°
C4C3C10101.9°100.5°
C4C3H3110.7°112.6°
C3C4C5115.3°113.0°
C3C4N8102.0°105.6°
C3C4H4112.1°108.5°
C10C3H3116.5°113.4°
C3C10C9101.4°102.6°
C3C10H101112.3°110.8°
C3C10H102112.3°110.8°
C5C4N8113.3°113.0°
C5C4H4100.5°108.6°
C4C5C6110.1°111.2°
C4C5H51109.3°109.1°
C4C5H52109.3°109.2°
N8C4H4114.2°107.9°
C4N8C9109.1°107.9°
C4N8C24126.0°126.1°
C6C5H51109.3°109.1°
C6C5H52109.3°109.1°
C5C6O7108.3°109.7°
C5C6H6110.7°109.7°
H51C5H52109.7°109.1°
O7C6H6108.4°109.7°
C6O7HO7109.5°114.0°
C9N8C24124.9°126.0°
N8C9C10106.6°107.2°
N8C9C11110.3°109.9°
N8C9H9110.7°109.9°
N8C24O25117.3°120.0°
N8C24C26122.1°120.0°
C10C9C11109.0°109.9°
C10C9H9111.9°109.9°
C9C10H101112.3°110.8°
C9C10H102112.3°110.8°
C11C9H9108.4°110.0°
C9C11N12118.7°120.0°
C9C11O23119.9°120.0°
H101C10H102106.5°110.8°
N12C11O23121.4°120.0°
C11N12C13119.6°120.0°
C11N12HN12120.2°120.0°
C13N12HN12120.2°120.0°
N12C13C14108.8°109.5°
N12C13H131109.7°109.4°
N12C13H132109.7°109.5°
C14C13H131109.7°109.5°
C14C13H132109.7°109.6°
C13C14C15108.0°109.4°
C13C14H141110.0°109.4°
C13C14H142110.0°109.5°
H131C13H132109.3°109.4°
C15C14H141110.0°109.5°
C15C14H142110.0°109.5°
C14C15C16122.9°124.9°
C14C15C19127.5°125.0°
H141C14H142108.9°109.5°
C16C15C19109.6°110.1°
C15C16N17107.3°107.1°
C15C16H161110.2°109.9°
C15C16H162110.2°109.9°
C15C19C18110.1°110.1°
C15C19H192125.0°124.9°
N17C16H161110.2°109.9°
N17C16H162110.2°109.9°
C16N17C18105.6°105.5°
C16N17C20125.9°127.3°
H161C16H162108.7°110.1°
C18N17C20128.5°127.2°
N17C18C19106.0°107.1°
N17C18H181110.7°109.9°
N17C18H182110.7°109.9°
N17C20N21120.6°120.0°
N17C20N22120.2°120.0°
C19C18H181110.6°110.1°
C19C18H182110.6°109.7°
C18C19H192125.0°124.9°
H181C18H182108.3°110.1°
N21C20N22119.2°120.0°
C20N21HN21112.0°119.9°
C20N22H221120.0°120.0°
C20N22H222120.0°120.0°
H221N22H222120.0°120.0°
O25C24C26120.6°120.0°
C24C26C27108.6°109.5°
C24C26N32110.4°109.5°
C24C26H26108.8°109.5°
C27C26N32107.5°109.5°
C27C26H26111.6°109.5°
C26C27C28113.4°109.5°
C26C27CL31108.6°109.5°
C26C27H27108.4°109.5°
N32C26H26109.9°109.5°
C26N32C33122.3°120.0°
C26N32HN32118.8°120.0°
C28C27CL31112.2°109.5°
C28C27H27104.4°109.4°
C27C28C29113.3°109.5°
C27C28C30107.5°109.4°
C27C28H28108.7°109.5°
CL31C27H27109.7°109.4°
C29C28C30110.8°109.4°
C29C28H28105.2°109.5°
C28C29H291109.5°109.4°
C28C29H292109.5°109.5°
C28C29H293109.5°109.4°
C30C28H28111.3°109.5°
C28C30H301109.5°109.5°
C28C30H302109.4°109.5°
C28C30H303109.5°109.5°
H291C29H292109.4°109.5°
H291C29H293109.5°109.5°
H292C29H293109.5°109.5°
H301C30H302109.5°109.4°
H301C30H303109.4°109.5°
H302C30H303109.5°109.5°
C33N32HN32118.8°120.0°
N32C33C34118.7°120.0°
N32C33O43122.4°120.0°
C34C33O43118.8°120.0°
C33C34O35109.6°109.4°
C33C34C37108.1°109.4°
C33C34H34111.5°109.5°
O35C34C37113.0°109.5°
O35C34H34106.5°109.5°
C34O35C36113.4°114.0°
C37C34H34108.1°109.5°
C34C37O38113.6°109.4°
C34C37H371108.1°109.5°
C34C37H372108.1°109.5°
O35C36H361109.5°109.5°
O35C36H362109.5°109.5°
O35C36H363109.5°109.5°
H361C36H362109.5°109.5°
H361C36H363109.4°109.4°
H362C36H363109.5°109.5°
O38C37H371108.1°109.5°
O38C37H372108.1°109.5°
C37O38S39115.2°114.0°
H371C37H372110.8°109.4°
O38S39O40108.6°107.3°
O38S39O41108.9°106.4°
O38S39O42105.1°106.4°
O40S39O41102.2°106.4°
O40S39O42123.5°106.4°
S39O40HO40109.5°114.0°
O41S39O42108.0°123.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6O46124.2°119.8°
C2C1C6H1117.5°119.8°
C2C1O46H1117.9°120.5°
C1C2C3H21120.0°120.3°
C1C2C3H22120.0°120.3°
C1C2H21H22116.7°119.4°
C1C2C3C430.0°54.8°
C1C2C3C1084.4°163.2°
C1C2C3H3150.9°72.0°
C2C1C6C553.6°63.2°
C2C1C6O767.8°177.1°
C2C1C6H6173.7°56.5°
C2C1O46HO46180.0°180.0°
C6C1O46H1115.7°120.4°
C6C1C2C338.3°62.0°
C6C1C2H2181.7°177.7°
C6C1C2H22158.3°58.3°
C1C6C5C460.5°59.2°
C1C6C5O7123.9°119.8°
C1C6C5H6117.3°119.7°
C1C6C5H51179.5°61.3°
C1C6C5H5259.5°179.6°
C1C6O7H6117.2°120.5°
C1C6O7HO7180.0°60.0°
C6C1O46HO4653.6°60.8°
O46C1C2C387.5°178.3°
O46C1C2H21152.5°58.0°
O46C1C2H2232.5°61.4°
O46C1C6C570.6°177.1°
O46C1C6O7168.0°57.3°
O46C1C6H649.5°63.2°
H1C1C2C3153.9°57.8°
H1C1C2H2133.9°62.5°
H1C1C2H2286.1°178.1°
H1C1C6C5171.1°56.6°
H1C1C6O749.7°63.1°
H1C1C6H668.8°176.3°
H1C1O46HO4662.1°59.5°
C3C2H21H22116.7°119.4°
C2C3C4C10118.7°112.3°
C2C3C4H3116.8°126.7°
C2C3C10H3116.6°124.2°
C2C3C4C537.4°50.6°
C2C3C4N8160.6°73.4°
C2C3C4H476.9°171.1°
C2C3C10C9163.5°78.7°
C2C3C10H10176.4°163.0°
C2C3C10H10243.5°39.6°
H21C2C3C490.0°175.0°
H21C2C3C10155.6°76.6°
H21C2C3H330.9°48.3°
H22C2C3C4150.0°65.5°
H22C2C3C1035.6°42.8°
H22C2C3H389.1°167.7°
C4C3C10H3120.6°120.4°
C3C4C5N8116.9°119.9°
C3C4C5H4120.8°120.4°
C3C4N8H4121.2°115.9°
C3C4C5C653.1°53.4°
C3C4C5H51173.1°67.0°
C3C4C5H5266.9°173.9°
C3C4N8C927.0°25.9°
C3C4N8C24152.0°154.2°
C4C3C10C940.7°36.7°
C4C3C10H101160.7°81.6°
C4C3C10H10279.3°155.0°
C10C3C4C581.3°163.0°
C10C3C4N841.9°39.0°
C10C3C4H4164.4°76.6°
C3C10C9N824.8°22.8°
C3C10C9H101120.0°118.3°
C3C10C9H102120.0°118.3°
C3C10C9C11143.8°96.6°
C3C10C9H996.3°142.2°
C3C10H101H102123.3°123.4°
H3C3C4C5154.2°76.1°
H3C3C4N882.7°160.0°
H3C3C4H439.9°44.4°
H3C3C10C979.9°157.1°
H3C3C10H10140.1°38.8°
H3C3C10H102160.1°84.6°
C5C4N8H4114.3°120.1°
C4C5C6H51120.0°120.4°
C4C5C6H52120.0°120.5°
C4C5H51H52119.8°119.2°
C4C5C6O763.4°178.9°
C4C5C6H6177.8°60.6°
C5C4N8C997.5°149.8°
C5C4N8C2483.5°30.2°
N8C4C5C6170.0°66.4°
N8C4C5H5170.0°173.2°
N8C4C5H5250.0°54.0°
C4N8C9C24179.0°180.0°
C4N8C9C101.4°1.5°
C4N8C9C11116.8°120.9°
C4N8C9H9123.3°117.9°
C4N8C24O25179.2°171.7°
C4N8C24C260.2°8.4°
H4C4C5C667.7°173.9°
H4C4C5H5152.3°53.5°
H4C4C5H52172.3°65.7°
H4C4N8C9148.2°90.1°
H4C4N8C2430.8°89.9°
C6C5H51H52119.8°119.1°
C5C6O7H6120.2°120.5°
C5C6O7HO757.4°179.0°
H51C5C6O756.6°58.5°
H51C5C6H662.2°179.0°
H52C5C6O7176.6°60.6°
H52C5C6H657.8°59.9°
H6C6O7HO762.8°60.5°
N8C9C10C11119.0°119.4°
N8C9C10H9121.1°119.4°
N8C9C11H9121.3°121.2°
N8C9C10H101144.8°95.5°
N8C9C10H10295.2°141.1°
N8C9C11N12141.0°177.1°
N8C9C11O2339.6°2.8°
C9N8C24O250.3°8.3°
C9N8C24C26179.0°171.7°
C24N8C9C10177.6°178.5°
C24N8C9C1164.2°59.1°
C24N8C9H955.7°62.1°
N8C24O25C26179.3°179.9°
N8C24C26C27118.1°78.7°
N8C24C26N32124.3°161.2°
N8C24C26H263.7°41.3°
C10C9C11H9122.0°121.1°
C9C10H101H102123.3°123.4°
C10C9C11N12102.3°59.4°
C10C9C11O2377.1°120.5°
C11C9C10H10196.2°145.1°
C11C9C10H10223.8°21.6°
C9C11N12O23179.5°179.9°
C9C11N12C13179.0°175.0°
C9C11N12HN121.0°5.0°
H9C9C10H10123.7°23.9°
H9C9C10H102143.7°99.6°
H9C9C11N1219.7°61.7°
H9C9C11O23160.8°118.4°
C11N12C13HN12180.0°179.9°
C11N12C13C14141.7°175.0°
C11N12C13H13198.4°65.0°
C11N12C13H13221.7°54.9°
O23C11N12C130.4°5.1°
O23C11N12HN12179.5°175.0°
N12C13C14H131120.0°119.9°
N12C13C14H132120.0°120.1°
N12C13H131H132120.3°119.9°
N12C13C14C1582.2°180.0°
N12C13C14H14137.8°60.1°
N12C13C14H142157.8°60.0°
HN12N12C13C1438.3°4.9°
HN12N12C13H13181.7°115.0°
HN12N12C13H132158.3°125.0°
C14C13H131H132120.2°120.1°
C13C14C15H141120.0°119.9°
C13C14C15H142120.0°120.0°
C13C14H141H142120.6°120.0°
C13C14C15C16163.3°85.0°
C13C14C15C1914.3°94.7°
H131C13C14C15157.9°60.0°
H131C13C14H14182.1°180.0°
H131C13C14H14237.8°60.0°
H132C13C14C1537.9°60.0°
H132C13C14H141157.9°60.0°
H132C13C14H14282.1°180.0°
C15C14H141H142120.6°120.1°
C14C15C16C19177.9°179.8°
C14C15C16N17173.0°180.0°
C14C15C16H16167.0°60.7°
C14C15C16H16253.0°60.7°
C14C15C19C18179.9°179.8°
C14C15C19H1920.1°0.0°
H141C14C15C1643.2°155.0°
H141C14C15C19134.3°25.2°
H142C14C15C1676.7°35.0°
H142C14C15C19105.7°145.3°
C15C16N17H161120.0°119.3°
C15C16N17H162120.0°119.4°
C15C16H161H162120.9°121.2°
C15C16N17C1812.2°0.0°
C15C16N17C20166.9°180.0°
C16C15C19C182.1°0.4°
C16C15C19H192177.9°179.7°
C19C15C16N179.1°0.3°
C19C15C16H161110.9°119.6°
C19C15C16H162129.1°119.1°
C15C19C18N175.6°0.4°
C15C19C18H192180.0°179.9°
C15C19C18H181114.4°119.1°
C15C19C18H182125.6°119.6°
N17C16H161H162120.9°121.1°
C16N17C18C20179.0°180.0°
C16N17C18C1910.9°0.2°
C16N17C18H181109.1°119.3°
C16N17C18H182130.9°119.3°
C16N17C20N21178.1°0.0°
C16N17C20N220.0°180.0°
H161C16N17C18107.8°119.3°
H161C16N17C2073.1°60.6°
H162C16N17C18132.2°119.4°
H162C16N17C2046.9°60.7°
N17C18C19H181120.0°119.5°
N17C18C19H182120.0°119.2°
N17C18H181H182121.4°121.2°
N17C18C19H192174.4°179.7°
C18N17C20N210.7°179.9°
C18N17C20N22178.8°0.0°
C20N17C18C19168.1°179.8°
C20N17C18H18171.9°60.6°
C20N17C18H18248.2°60.7°
N17C20N21N22178.1°180.0°
N17C20N21HN21178.1°180.0°
N17C20N22H221178.1°0.0°
N17C20N22H2221.9°180.0°
C19C18H181H182121.4°121.0°
H181C18C19H19265.6°60.8°
H182C18C19H19254.3°60.5°
N21C20N22H2210.0°180.0°
N21C20N22H222180.0°0.0°
N22C20N21HN210.0°0.0°
C20N22H221H222180.0°180.0°
O25C24C26C2761.2°101.4°
O25C24C26N3256.4°18.7°
O25C24C26H26177.0°138.7°
C24C26C27N32119.5°120.0°
C24C26C27H26120.0°120.0°
C24C26N32H26120.0°120.0°
C24C26C27C28177.0°172.6°
C24C26C27CL3157.5°52.5°
C24C26C27H2761.6°67.4°
C24C26N32C33109.6°155.0°
C24C26N32HN3270.3°25.1°
C27C26N32H26121.7°120.0°
C26C27C28CL31123.5°120.0°
C26C27C28H27117.8°120.0°
C26C27CL31H27118.3°120.0°
C26C27C28C2956.1°64.9°
C26C27C28C30178.9°175.2°
C26C27C28H2860.5°55.1°
C27C26N32C33132.1°85.0°
C27C26N32HN3248.0°94.9°
N32C26C27C2857.6°67.4°
N32C26C27CL31177.0°172.6°
N32C26C27H2757.9°52.6°
C26N32C33HN32180.0°179.9°
C26N32C33C34179.2°180.0°
C26N32C33O431.2°0.0°
H26C26C27C2863.0°52.6°
H26C26C27CL3162.5°67.4°
H26C26C27H27178.5°172.6°
H26C26N32C3310.4°35.0°
H26C26N32HN32169.6°145.1°
C28C27CL31H27115.6°120.0°
C27C28C29C30120.9°119.9°
C27C28C29H28118.6°120.0°
C27C28C30H28118.9°120.0°
C27C28C29H291180.0°60.0°
C27C28C29H29260.0°60.0°
C27C28C29H29360.0°180.0°
C27C28C30H301180.0°65.0°
C27C28C30H30260.0°175.1°
C27C28C30H30360.0°55.1°
CL31C27C28C2967.3°55.2°
CL31C27C28C3055.4°64.8°
CL31C27C28H28176.0°175.2°
H27C27C28C29173.9°175.1°
H27C27C28C3063.3°55.2°
H27C27C28H2857.3°64.9°
C29C28C30H28116.8°120.1°
C28C29H291H292120.0°120.0°
C28C29H291H293120.0°119.9°
C28C29H292H293120.0°120.0°
C29C28C30H30155.7°175.0°
C29C28C30H30264.3°55.1°
C29C28C30H303175.7°64.9°
C30C28C29H29159.1°180.0°
C30C28C29H292179.0°60.0°
C30C28C29H29360.9°60.1°
C28C30H301H302120.0°119.9°
C28C30H301H303120.0°120.1°
C28C30H302H303120.0°120.1°
H28C28C29H29161.4°59.9°
H28C28C29H29258.6°179.9°
H28C28C29H293178.6°60.0°
H28C28C30H30161.1°55.0°
H28C28C30H302178.9°64.9°
H28C28C30H30358.9°175.1°
H291C29H292H293120.0°120.1°
H301C30H302H303120.0°120.0°
N32C33C34O43179.6°180.0°
N32C33C34O3524.6°175.0°
N32C33C34C3799.0°65.0°
N32C33C34H34142.3°55.0°
HN32N32C33C340.8°0.0°
HN32N32C33O43178.8°179.9°
C33C34O35C37120.7°119.9°
C33C34O35H34120.8°120.0°
C33C34C37H34120.9°120.0°
C33C34O35C3688.2°150.0°
C33C34C37O3874.0°175.0°
C33C34C37H371166.0°55.0°
C33C34C37H37246.0°65.0°
O43C33C34O35155.0°4.9°
O43C33C34C3781.4°115.0°
O43C33C34H3437.3°125.0°
O35C34C37H34117.6°120.0°
C34O35C36H361180.0°60.0°
C34O35C36H36260.0°60.0°
C34O35C36H36360.0°180.0°
O35C34C37O3847.6°65.0°
O35C34C37H37172.5°174.9°
O35C34C37H372167.6°55.0°
C37C34O35C36151.2°90.0°
C34C37O38H371120.0°120.0°
C34C37O38H372120.0°120.0°
C34C37H371H372118.3°120.0°
C34C37O38S39157.2°180.0°
H34C34O35C3632.6°30.0°
H34C34C37O38165.1°55.0°
H34C34C37H37145.1°65.0°
H34C34C37H37274.9°175.0°
O35C36H361H362120.0°120.0°
O35C36H361H363120.0°120.0°
O35C36H362H363120.0°120.1°
H361C36H362H363119.9°119.9°
O38C37H371H372118.3°120.0°
C37O38S39O40172.8°75.0°
C37O38S39O4176.6°171.5°
C37O38S39O4238.9°38.6°
H371C37O38S3982.8°60.0°
H372C37O38S3937.2°60.0°
O38S39O40O41115.0°113.6°
O38S39O40O42123.5°113.6°
O38S39O41O42113.6°123.0°
O38S39O40HO40115.1°179.9°
O40S39O41O42131.6°122.9°
O41S39O40HO400.0°66.5°
O42S39O40HO40121.5°66.3°

225946

PDB entries from 2024-10-09

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