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SMM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NCAsing1.44Å1.42Å
NHN1sing1.01Å1.02Å
NHN2sing1.01Å1.02Å
CACBsing1.53Å1.50Å
CACsing1.52Å1.54Å
CAHA1sing1.10Å1.11Å
CBCGsing1.52Å1.64Å
CBHB1sing1.10Å1.11Å
CBHB2sing1.10Å1.12Å
CGSDsing1.76Å1.67Å
CGHG1sing1.09Å1.12Å
CGHG2sing1.09Å1.11Å
SDCEsing1.77Å1.50Å
SDC5'sing1.77Å1.69Å
SDHD1sing1.35Å1.30Å
CEHE1sing1.09Å1.12Å
CEHE2sing1.09Å1.11Å
CEHE3sing1.09Å1.11Å
C5'C4'sing1.52Å1.51Å
C5'H5'1sing1.09Å1.12Å
C5'H5'2sing1.09Å1.12Å
C4'O4'sing1.45Å1.46Å
C4'C3'sing1.52Å1.53Å
C4'H4'sing1.09Å1.11Å
O4'C1'sing1.44Å1.42Å
C1'N9sing1.46Å1.46Å
C1'C2'sing1.52Å1.53Å
C1'H1'sing1.10Å1.12Å
N9C4sing1.37Å1.37ÅAromatic
N9C8sing1.37Å1.38ÅAromatic
C4N3doub1.34Å1.34ÅAromatic
C4C5sing1.39Å1.38ÅAromatic
N3C2sing1.35Å1.33ÅAromatic
C2N1doub1.35Å1.34ÅAromatic
C2H2sing1.09Å1.10Å
N1C6sing1.35Å1.35ÅAromatic
C6N6sing1.41Å1.34Å
C6C5doub1.39Å1.41ÅAromatic
N6HN61sing1.00Å1.02Å
N6HN62sing1.00Å1.02Å
C5N7sing1.37Å1.39ÅAromatic
N7C8doub1.32Å1.31ÅAromatic
C8H8sing1.08Å1.10Å
C2'O2'sing1.41Å1.41Å
C2'C3'sing1.52Å1.52Å
C2'H2'sing1.10Å1.11Å
O2'HO2'sing0.97Å0.95Å
C3'O3'sing1.43Å1.43Å
C3'H3'sing1.09Å1.11Å
O3'HO3'sing0.97Å0.95Å
COdoub1.23Å1.26Å
COXTsing1.36Å1.26Å
OXTCXTsing1.43Å1.31Å
CXTHXT1sing1.09Å1.11Å
CXTHXT2sing1.09Å1.12Å
CXTHXT3sing1.09Å1.12Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CANHN1107.7°119.0°
CANHN2112.8°119.0°
NCACB107.8°111.2°
NCAC111.6°111.2°
NCAHA1108.7°106.4°
HN1NHN2112.9°120.6°
CBCAC107.8°110.1°
CBCAHA1112.4°111.0°
CACBCG110.2°112.6°
CACBHB1112.0°109.8°
CACBHB2111.9°109.9°
CCAHA1108.6°106.9°
CACO118.3°122.6°
CACOXT117.7°112.4°
CGCBHB1111.9°108.9°
CGCBHB2111.9°109.6°
CBCGSD110.5°111.3°
CBCGHG1111.8°111.8°
CBCGHG2111.8°111.2°
HB1CBHB298.5°105.9°
SDCGHG1111.8°106.6°
SDCGHG2111.8°106.9°
CGSDCE109.0°106.4°
CGSDC5'108.8°105.7°
CGSDHD1110.5°112.7°
HG1CGHG298.6°108.9°
CESDC5'110.2°106.3°
CESDHD1109.1°112.5°
SDCEHE1109.0°108.4°
SDCEHE2112.4°108.4°
SDCEHE3112.4°108.3°
C5'SDHD1109.3°112.6°
SDC5'C4'112.4°111.5°
SDC5'H5'1111.2°107.1°
SDC5'H5'2111.2°107.1°
HE1CEHE2112.3°110.6°
HE1CEHE3112.4°110.5°
HE2CEHE398.1°110.5°
C4'C5'H5'1111.1°111.0°
C4'C5'H5'2111.1°111.0°
C5'C4'O4'109.7°108.4°
C5'C4'C3'114.1°112.9°
C5'C4'H4'104.9°109.3°
H5'1C5'H5'299.2°108.9°
O4'C4'C3'105.3°106.4°
O4'C4'H4'113.7°107.6°
C4'O4'C1'109.8°108.8°
C3'C4'H4'109.3°112.1°
C4'C3'C2'102.0°102.3°
C4'C3'O3'110.4°108.8°
C4'C3'H3'113.9°114.5°
O4'C1'N9108.1°109.7°
O4'C1'C2'105.3°106.1°
O4'C1'H1'114.4°108.9°
N9C1'C2'113.3°114.0°
N9C1'H1'106.6°105.3°
C1'N9C4125.8°126.9°
C1'N9C8128.4°126.1°
C2'C1'H1'109.3°112.6°
C1'C2'O2'111.4°111.9°
C1'C2'C3'100.6°101.5°
C1'C2'H2'115.4°111.1°
C4N9C8105.9°107.0°
N9C4N3127.2°127.5°
N9C4C5105.9°105.2°
N9C8N7113.7°112.2°
N9C8H8125.2°122.2°
N3C4C5126.9°127.3°
C4N3C2110.6°110.4°
C4C5C6116.9°116.9°
C4C5N7110.7°110.7°
N3C2N1129.3°128.8°
N3C2H2114.9°115.6°
N1C2H2115.8°115.5°
C2N1C6118.6°117.5°
N1C6N6118.7°120.2°
N1C6C5117.6°119.0°
N6C6C5123.7°120.7°
C6N6HN61118.6°119.5°
C6N6HN62108.9°119.4°
C6C5N7132.4°132.4°
HN61N6HN62108.9°120.8°
C5N7C8103.8°104.9°
N7C8H8121.1°125.6°
O2'C2'C3'113.2°113.1°
O2'C2'H2'103.1°108.9°
C2'O2'HO2'111.4°107.3°
C3'C2'H2'113.6°110.3°
C2'C3'O3'110.0°109.5°
C2'C3'H3'114.2°113.8°
O3'C3'H3'106.4°107.7°
C3'O3'HO3'110.4°106.4°
OCOXT124.0°125.0°
COXTCXT115.1°115.8°
OXTCXTHXT1115.1°109.5°
OXTCXTHXT2110.2°109.5°
OXTCXTHXT3110.2°109.0°
HXT1CXTHXT2110.2°110.1°
HXT1CXTHXT3110.2°109.3°
HXT2CXTHXT3100.0°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CANHN1HN2125.3°166.3°
NCACBC120.6°123.6°
NCACBHA1119.7°118.2°
NCACHA1119.8°115.7°
NCACBCG136.2°65.1°
NCACBHB111.0°56.4°
NCACBHB298.5°172.5°
NCACO135.7°4.3°
NCACOXT42.7°175.8°
HN1NCACB180.0°62.2°
HN1NCAC61.8°60.8°
HN1NCAHA158.0°176.8°
HN2NCACB54.7°131.2°
HN2NCAC172.9°105.8°
HN2NCAHA167.3°10.2°
CBCACHA1122.0°120.7°
CACBCGHB1125.3°122.0°
CACBCGHB2125.3°122.6°
CACBHB1HB2117.8°118.6°
CACBCGSD167.9°179.0°
CACBCGHG142.7°60.0°
CACBCGHG266.9°62.0°
CBCACO17.5°119.3°
CBCACOXT160.9°60.5°
CCACBCG103.1°58.6°
CCACBHB1131.6°180.0°
CCACBHB222.1°63.9°
CACOOXT178.3°179.9°
CACOXTCXT126.9°179.9°
HA1CACBCG16.5°176.7°
HA1CACBHB1108.7°61.8°
HA1CACBHB2141.8°54.3°
HA1CACO104.5°120.0°
HA1CACOXT77.1°60.2°
CGCBHB1HB2117.8°117.7°
CBCGSDHG1125.2°122.1°
CBCGSDHG2125.3°121.6°
CBCGHG1HG2117.8°123.3°
CBCGSDCE87.8°177.9°
CBCGSDC5'152.1°65.1°
CBCGSDHD132.1°58.3°
HB1CBCGSD66.8°59.0°
HB1CBCGHG1168.0°178.1°
HB1CBCGHG258.4°60.0°
HB2CBCGSD42.6°56.4°
HB2CBCGHG182.6°62.7°
HB2CBCGHG2167.9°175.4°
SDCGHG1HG2117.7°115.0°
CGSDCEC5'119.2°112.3°
CGSDCEHD1120.7°123.9°
CGSDC5'HD1120.7°123.5°
CGSDCEHE1180.0°96.6°
CGSDCEHE254.8°23.5°
CGSDCEHE354.8°143.4°
CGSDC5'C4'172.3°176.5°
CGSDC5'H5'162.5°61.8°
CGSDC5'H5'247.0°54.9°
HG1CGSDCE146.9°60.0°
HG1CGSDC5'26.8°172.8°
HG1CGSDHD193.2°63.8°
HG2CGSDCE37.4°56.3°
HG2CGSDC5'82.7°56.5°
HG2CGSDHD1157.3°179.9°
CESDC5'HD1119.9°123.7°
SDCEHE1HE2125.2°118.7°
SDCEHE1HE3125.2°118.6°
SDCEHE2HE3118.3°118.6°
CESDC5'C4'52.9°63.7°
CESDC5'H5'1178.1°174.6°
CESDC5'H5'272.4°57.9°
C5'SDCEHE160.7°15.7°
C5'SDCEHE264.4°135.8°
C5'SDCEHE3174.0°104.2°
SDC5'C4'H5'1125.3°119.4°
SDC5'C4'H5'2125.3°119.4°
SDC5'H5'1H5'2117.1°115.6°
SDC5'C4'O4'47.1°61.7°
SDC5'C4'C3'164.9°179.3°
SDC5'C4'H4'75.5°55.2°
HD1SDCEHE159.3°139.5°
HD1SDCEHE2175.5°100.4°
HD1SDCEHE366.0°19.5°
HD1SDC5'C4'67.0°60.0°
HD1SDC5'H5'158.2°61.7°
HD1SDC5'H5'2167.7°178.4°
HE1CEHE2HE3118.3°122.7°
C4'C5'H5'1H5'2117.0°122.4°
C5'C4'O4'C3'123.2°121.7°
C5'C4'O4'H4'117.2°118.0°
C5'C4'C3'H4'117.1°123.9°
C5'C4'O4'C1'117.7°114.3°
C5'C4'C3'C2'91.4°90.2°
C5'C4'C3'O3'151.7°154.1°
C5'C4'C3'H3'32.1°33.5°
H5'1C5'C4'O4'78.2°57.7°
H5'1C5'C4'C3'39.6°59.9°
H5'1C5'C4'H4'159.3°174.6°
H5'2C5'C4'O4'172.4°178.9°
H5'2C5'C4'C3'69.8°61.3°
H5'2C5'C4'H4'49.8°64.2°
O4'C4'C3'H4'122.5°117.3°
C4'O4'C1'N9141.7°140.6°
C4'O4'C1'C2'20.3°16.9°
C4'O4'C1'H1'99.7°104.6°
O4'C4'C3'C2'28.9°28.6°
O4'C4'C3'O3'87.9°87.2°
O4'C4'C3'H3'152.4°152.3°
C3'C4'O4'C1'5.5°7.4°
C4'C3'C2'C1'39.7°37.4°
C4'C3'C2'O2'158.6°157.4°
C4'C3'C2'O3'117.1°115.3°
C4'C3'C2'H3'123.3°124.1°
C4'C3'C2'H2'84.2°80.4°
C4'C3'O3'H3'124.0°124.6°
C4'C3'O3'HO3'180.0°175.9°
H4'C4'O4'C1'125.1°127.7°
H4'C4'C3'C2'151.4°145.9°
H4'C4'C3'O3'34.6°30.1°
H4'C4'C3'H3'85.0°90.4°
O4'C1'N9C2'116.3°118.9°
O4'C1'N9H1'123.5°117.1°
O4'C1'C2'H1'123.4°119.1°
O4'C1'N9C451.9°147.1°
O4'C1'N9C8128.2°32.9°
O4'C1'C2'O2'157.9°155.0°
O4'C1'C2'C3'37.6°34.2°
O4'C1'C2'H2'85.0°83.0°
N9C1'C2'H1'118.7°119.9°
C1'N9C4C8179.9°179.9°
C1'N9C4N30.2°0.0°
C1'N9C4C5179.5°179.9°
C1'N9C8N7179.6°180.0°
C1'N9C8H80.4°0.1°
N9C1'C2'O2'84.2°84.0°
N9C1'C2'C3'155.5°155.2°
N9C1'C2'H2'32.9°37.9°
C2'C1'N9C464.4°94.0°
C2'C1'N9C8115.5°86.0°
C1'C2'O2'C3'112.5°113.8°
C1'C2'O2'H2'124.3°123.1°
C1'C2'C3'H2'123.9°117.8°
C1'C2'O2'HO2'180.0°56.6°
C1'C2'C3'O3'77.5°77.9°
C1'C2'C3'H3'163.0°161.5°
H1'C1'N9C4175.3°29.9°
H1'C1'N9C84.8°150.0°
H1'C1'C2'O2'34.5°35.9°
H1'C1'C2'C3'85.8°84.9°
H1'C1'C2'H2'151.6°157.8°
N9C4N3C5179.6°180.0°
N9C4N3C2179.6°180.0°
N9C4C5C6179.4°180.0°
N9C4C5N70.4°0.0°
C4N9C8N70.3°0.0°
C4N9C8H8179.7°180.0°
C8N9C4N3179.9°180.0°
C8N9C4C50.5°0.0°
N9C8N7C50.1°0.0°
N9C8N7H8180.0°179.9°
C4N3C2N10.2°0.0°
C4N3C2H2179.8°180.0°
N3C4C5C60.2°0.0°
N3C4C5N7179.9°180.0°
C5C4N3C20.1°0.0°
C4C5C6N10.3°0.0°
C4C5C6N6179.5°180.0°
C4C5C6N7179.9°179.9°
C4C5N7C80.2°0.0°
N3C2N1H2180.0°180.0°
N3C2N1C60.1°0.0°
C2N1C6N6179.6°180.0°
C2N1C6C50.2°0.0°
H2C2N1C6179.9°180.0°
N1C6N6C5179.8°180.0°
N1C6N6HN61180.0°77.2°
N1C6N6HN6254.8°109.1°
N1C6C5N7179.8°180.0°
C6N6HN61HN62125.2°173.6°
N6C6C5N70.4°0.1°
C5C6N6HN610.2°102.8°
C5C6N6HN62125.0°70.9°
C6C5N7C8179.6°180.0°
C5N7C8H8180.0°180.0°
O2'C2'C3'H2'117.2°122.2°
O2'C2'C3'O3'41.5°42.1°
O2'C2'C3'H3'78.1°78.5°
C3'C2'O2'HO2'67.5°170.4°
C2'C3'O3'H3'124.2°124.3°
C2'C3'O3'HO3'68.2°73.0°
H2'C2'O2'HO2'55.7°66.5°
H2'C2'C3'O3'158.7°164.3°
H2'C2'C3'H3'39.1°43.7°
H3'C3'O3'HO3'56.0°51.3°
OCOXTCXT54.8°0.0°
COXTCXTHXT1180.0°33.2°
COXTCXTHXT254.7°87.6°
COXTCXTHXT354.7°152.7°
OXTCXTHXT1HXT2125.3°120.5°
OXTCXTHXT1HXT3125.3°119.3°
OXTCXTHXT2HXT3116.0°119.4°
HXT1CXTHXT2HXT3116.0°120.2°

219869

PDB entries from 2024-05-15

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