Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

SMH

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O16C1sing1.36Å1.37Å
C1C2doub1.39Å1.41ÅAromatic
C1C6sing1.38Å1.42ÅAromatic
C2C3sing1.38Å1.41ÅAromatic
C2H2sing1.08Å1.08Å
C3C4doub1.39Å1.41ÅAromatic
C3H3sing1.08Å1.08Å
C5C4sing1.40Å1.42ÅAromatic
C4O7sing1.35Å1.37Å
C6C5doub1.40Å1.41ÅAromatic
C5C10sing1.47Å1.48Å
C6H6sing1.08Å1.08Å
O7C8sing1.43Å1.42Å
C9C8sing1.54Å1.55Å
C8C11sing1.53Å1.54Å
C8C15sing1.53Å1.56Å
C10C9sing1.52Å1.52Å
C9H9sing1.09Å1.10Å
C9H9Asing1.09Å1.10Å
O17C10doub1.21Å1.22Å
C11N12sing1.47Å1.50Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
N12C18sing1.47Å1.48Å
N12C13sing1.47Å1.49Å
C14C13sing1.53Å1.56Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
C15C14sing1.53Å1.54Å
C14H14sing1.09Å1.10Å
C14H14Asing1.09Å1.10Å
C15H15sing1.09Å1.10Å
C15H15Asing1.09Å1.10Å
O16HO16sing0.97Å0.95Å
C19C18sing1.53Å1.54Å
C18H18sing1.09Å1.10Å
C18H18Asing1.09Å1.10Å
O20C19sing1.43Å1.42Å
C19C21sing1.53Å1.54Å
C19H19sing1.09Å1.10Å
O20HO20sing0.97Å0.95Å
N22C21sing1.47Å1.49Å
C21H21sing1.09Å1.10Å
C21H21Asing1.09Å1.10Å
C23N22sing1.46Å1.49Å
S33N22sing1.66Å1.75Å
C23C24sing1.53Å1.55Å
C23H23sing1.09Å1.10Å
C23H23Asing1.09Å1.10Å
O36C24sing1.43Å1.42Å
C24H24sing1.09Å1.10Å
C24H24Asing1.09Å1.10Å
C30C25doub1.38Å1.42ÅAromatic
C25C26sing1.38Å1.42ÅAromatic
C25S33sing1.76Å1.84Å
C27C26doub1.38Å1.41ÅAromatic
C26C32sing1.51Å1.52Å
C28C27sing1.38Å1.41ÅAromatic
C27H27sing1.08Å1.08Å
C29C28doub1.38Å1.41ÅAromatic
C28H28sing1.08Å1.08Å
C29C30sing1.38Å1.41ÅAromatic
C29H29sing1.08Å1.08Å
C31C30sing1.51Å1.52Å
C31H31sing1.09Å1.10Å
C31H31Asing1.09Å1.10Å
C31H31Bsing1.09Å1.10Å
C32H32sing1.09Å1.10Å
C32H32Asing1.09Å1.10Å
C32H32Bsing1.09Å1.10Å
O35S33doub1.42Å1.46Å
S33O34doub1.42Å1.46Å
O36C38sing1.43Å1.41Å
C37C38sing1.53Å1.53Å
C37H37sing1.09Å1.10Å
C37H37Asing1.09Å1.10Å
C37H37Bsing1.09Å1.10Å
C38H38sing1.09Å1.10Å
C38H38Asing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O16C1C2117.3°120.0°
O16C1C6120.8°120.0°
C1O16HO16109.5°114.0°
C2C1C6121.9°120.0°
C1C2C3119.1°120.7°
C1C2H2120.4°119.6°
C1C6C5118.4°119.6°
C1C6H6120.8°120.2°
C3C2H2120.4°119.7°
C2C3C4119.6°120.2°
C2C3H3120.2°119.9°
C4C3H3120.2°119.9°
C3C4C5121.1°119.3°
C3C4O7119.0°120.0°
C5C4O7119.9°120.7°
C4C5C6119.7°120.3°
C4C5C10118.8°119.1°
C4O7C8118.8°118.6°
C6C5C10121.5°120.7°
C5C6H6120.8°120.2°
C5C10C9116.8°116.5°
C5C10O17125.2°121.7°
O7C8C9107.1°109.4°
O7C8C11109.3°109.7°
O7C8C15108.6°109.7°
C9C8C11107.8°109.3°
C9C8C15112.0°109.3°
C8C9C10111.6°107.1°
C8C9H9108.8°109.9°
C8C9H9A108.8°109.9°
C11C8C15111.9°109.4°
C8C11N12114.2°109.5°
C8C11H11107.9°109.5°
C8C11H11A107.9°109.5°
C8C15C14114.2°109.2°
C8C15H15107.9°109.6°
C8C15H15A107.9°109.5°
C10C9H9108.7°109.9°
C10C9H9A108.7°110.0°
C9C10O17117.9°121.8°
H9C9H9A110.2°109.9°
N12C11H11107.9°109.5°
N12C11H11A107.9°109.4°
C11N12C18111.5°111.0°
C11N12C13114.3°111.2°
H11C11H11A111.0°109.4°
C18N12C13112.9°111.0°
N12C18C19114.6°109.5°
N12C18H18107.8°109.5°
N12C18H18A107.8°109.5°
N12C13C14113.8°109.5°
N12C13H13108.1°109.5°
N12C13H13A108.1°109.5°
C14C13H13108.0°109.5°
C14C13H13A108.0°109.5°
C13C14C15111.4°109.3°
C13C14H14108.8°109.5°
C13C14H14A108.8°109.5°
H13C13H13A110.8°109.4°
C15C14H14108.8°109.5°
C15C14H14A108.8°109.5°
C14C15H15107.9°109.5°
C14C15H15A107.9°109.5°
H14C14H14A110.1°109.5°
H15C15H15A111.0°109.6°
C19C18H18107.8°109.4°
C19C18H18A107.8°109.5°
C18C19O20109.7°109.5°
C18C19C21110.9°109.5°
C18C19H19108.3°109.5°
H18C18H18A111.1°109.5°
O20C19C21109.2°109.5°
O20C19H19109.9°109.5°
C19O20HO20109.5°114.0°
C21C19H19108.8°109.5°
C19C21N22112.5°109.5°
C19C21H21108.5°109.5°
C19C21H21A108.5°109.5°
N22C21H21108.5°109.4°
N22C21H21A108.5°109.5°
C21N22C23115.6°120.0°
C21N22S33122.6°120.0°
H21C21H21A110.5°109.5°
C23N22S33121.3°120.0°
N22C23C24110.7°109.5°
N22C23H23109.1°109.5°
N22C23H23A109.1°109.4°
N22S33C25105.2°107.2°
N22S33O35108.1°106.4°
N22S33O34108.7°106.4°
C24C23H23109.1°109.5°
C24C23H23A109.0°109.5°
C23C24O36109.5°109.5°
C23C24H24109.5°109.5°
C23C24H24A109.4°109.5°
H23C23H23A109.9°109.5°
O36C24H24109.4°109.5°
O36C24H24A109.5°109.5°
C24O36C38112.2°114.0°
H24C24H24A109.5°109.4°
C30C25C26119.9°120.0°
C30C25S33121.3°120.0°
C25C30C29120.1°120.1°
C25C30C31121.9°120.0°
C26C25S33118.8°120.0°
C25C26C27120.1°120.0°
C25C26C32121.6°120.0°
C25S33O35110.2°106.4°
C25S33O34107.5°106.4°
C27C26C32118.3°120.0°
C26C27C28119.4°120.0°
C26C27H27120.3°119.9°
C26C32H32109.5°109.5°
C26C32H32A109.4°109.4°
C26C32H32B109.5°109.5°
C28C27H27120.3°120.0°
C27C28C29121.2°120.0°
C27C28H28119.4°120.0°
C29C28H28119.4°120.0°
C28C29C30119.3°119.9°
C28C29H29120.3°120.0°
C30C29H29120.3°120.0°
C29C30C31118.0°120.0°
C30C31H31109.5°109.5°
C30C31H31A109.5°109.5°
C30C31H31B109.5°109.5°
H31C31H31A109.5°109.5°
H31C31H31B109.4°109.5°
H31AC31H31B109.5°109.4°
H32C32H32A109.5°109.5°
H32C32H32B109.5°109.4°
H32AC32H32B109.5°109.5°
O35S33O34116.6°123.2°
O36C38C37106.9°109.5°
O36C38H38110.3°109.5°
O36C38H38A110.3°109.5°
C38C37H37109.5°109.5°
C38C37H37A109.5°109.5°
C38C37H37B109.4°109.5°
C37C38H38110.3°109.5°
C37C38H38A110.3°109.5°
H37C37H37A109.5°109.4°
H37C37H37B109.5°109.5°
H37AC37H37B109.5°109.5°
H38C38H38A108.6°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O16C1C2C6179.3°179.7°
O16C1C2C3178.8°179.9°
O16C1C2H21.2°0.1°
O16C1C6C5178.1°179.7°
O16C1C6H61.9°0.3°
C1C2C3H2180.0°179.9°
C1C2C3C40.4°0.1°
C1C2C3H3179.6°180.0°
C2C1C6C51.1°0.0°
C2C1C6H6178.9°179.9°
C2C1O16HO16180.0°90.0°
C6C1C2C30.4°0.2°
C6C1C2H2179.6°179.9°
C1C6C5C41.0°0.4°
C1C6C5H6180.0°180.0°
C1C6C5C10179.2°179.5°
C6C1O16HO160.7°90.3°
C2C3C4H3180.0°179.9°
C2C3C4C50.6°0.2°
C2C3C4O7179.0°179.7°
H2C2C3C4179.6°180.0°
H2C2C3H30.4°0.0°
C3C4C5O7179.6°179.9°
C3C4C5C60.1°0.5°
C3C4C5C10180.0°179.4°
C3C4O7C8147.9°157.5°
H3C3C4C5179.4°179.7°
H3C3C4O71.0°0.4°
C4C5C6C10179.9°179.9°
C4C5C6H6179.0°179.6°
C5C4O7C831.7°22.7°
C4C5C10C90.5°11.8°
C4C5C10O17174.6°168.2°
O7C4C5C6179.7°179.4°
O7C4C5C100.4°0.7°
C4O7C8C958.1°52.9°
C4O7C8C11174.6°67.1°
C4O7C8C1563.0°172.7°
C6C5C10C9179.6°168.3°
C6C5C10O175.2°11.7°
C10C5C6H60.8°0.5°
C5C10C9C826.8°39.8°
C5C10C9O17175.5°180.0°
C5C10C9H9146.8°79.6°
C5C10C9H9A93.2°159.3°
O7C8C9C11117.5°120.2°
O7C8C9C15118.9°120.1°
O7C8C11C15120.3°120.4°
O7C8C9C1053.4°58.7°
O7C8C9H9173.3°60.7°
O7C8C9H9A66.6°178.2°
O7C8C11N1273.0°61.3°
O7C8C11H1147.0°58.7°
O7C8C11H11A167.0°178.7°
O7C8C15C1473.4°62.8°
O7C8C15H15166.6°177.2°
O7C8C15H15A46.6°57.0°
C9C8C11C15123.6°119.6°
C8C9C10H9120.0°119.4°
C8C9C10H9A120.0°119.5°
C8C9H9H9A119.2°121.2°
C8C9C10O17157.7°140.2°
C9C8C11N12170.9°178.7°
C9C8C11H1169.0°61.3°
C9C8C11H11A50.9°58.7°
C9C8C15C14168.6°177.2°
C9C8C15H1548.6°57.2°
C9C8C15H15A71.4°62.9°
C11C8C9C10170.9°61.4°
C11C8C9H969.2°179.2°
C11C8C9H9A50.9°58.0°
C8C11N12H11120.0°120.1°
C8C11N12H11A120.0°120.0°
C8C11H11H11A118.1°120.0°
C8C11N12C18179.7°174.2°
C8C11N12C1350.2°61.7°
C11C8C15C1447.4°57.6°
C11C8C15H1572.7°62.4°
C11C8C15H15A167.4°177.4°
C15C8C9C1065.6°178.9°
C15C8C9H954.4°59.5°
C15C8C9H9A174.5°61.7°
C15C8C11N1247.3°59.1°
C15C8C11H11167.3°179.1°
C15C8C11H11A72.7°60.9°
C8C15C14C1348.3°57.6°
C8C15C14H15120.0°120.0°
C8C15C14H15A120.0°119.9°
C8C15C14H1471.7°62.4°
C8C15C14H14A168.3°177.5°
C8C15H15H15A118.1°120.1°
C10C9H9H9A119.1°121.2°
H9C9C10O1737.7°100.4°
H9AC9C10O1782.3°20.7°
N12C11H11H11A118.1°119.9°
C11N12C18C13130.3°124.2°
C11N12C13C1451.3°61.8°
C11N12C13H13171.3°178.2°
C11N12C13H13A68.7°58.2°
C11N12C18C1964.4°75.6°
C11N12C18H1855.6°44.3°
C11N12C18H18A175.6°164.4°
H11C11N12C1860.3°54.1°
H11C11N12C13170.2°178.3°
H11AC11N12C1859.7°65.8°
H11AC11N12C1369.8°58.3°
C18N12C13C14179.9°174.1°
C18N12C13H1359.9°54.1°
C18N12C13H13A60.1°65.9°
N12C18C19H18120.0°120.0°
N12C18C19H18A120.0°120.0°
N12C18H18H18A117.9°120.0°
N12C18C19O2041.0°62.7°
N12C18C19C21161.8°177.3°
N12C18C19H1979.0°57.3°
N12C13C14H13120.0°120.0°
N12C13C14H13A120.0°120.0°
N12C13H13H13A118.2°120.0°
N12C13C14C1549.9°59.2°
N12C13C14H1470.1°60.8°
N12C13C14H14A169.9°179.1°
C13N12C18C19165.3°160.2°
C13N12C18H1874.6°79.9°
C13N12C18H18A45.3°40.2°
C14C13H13H13A118.2°120.0°
C13C14C15H14120.0°120.0°
C13C14C15H14A120.0°120.0°
C13C14H14H14A119.2°120.1°
C13C14C15H1571.7°62.4°
C13C14C15H15A168.3°177.5°
H13C13C14C15169.9°179.2°
H13C13C14H1449.9°59.3°
H13C13C14H14A70.1°60.8°
H13AC13C14C1570.1°60.8°
H13AC13C14H14169.9°179.2°
H13AC13C14H14A49.9°59.1°
C15C14H14H14A119.2°120.1°
C14C15H15H15A118.0°120.1°
H14C14C15H15168.3°177.7°
H14C14C15H15A48.3°57.5°
H14AC14C15H1548.3°57.6°
H14AC14C15H15A71.7°62.6°
C19C18H18H18A117.9°120.0°
C18C19O20C21121.8°120.0°
C18C19O20H19119.0°120.0°
C18C19C21H19119.0°120.0°
C18C19O20HO20180.0°57.6°
C18C19C21N22155.8°176.7°
C18C19C21H2135.8°56.8°
C18C19C21H21A84.2°63.2°
H18C18C19O20161.1°177.3°
H18C18C19C2178.2°57.3°
H18C18C19H1941.1°62.7°
H18AC18C19O2078.9°57.3°
H18AC18C19C2141.8°62.7°
H18AC18C19H19161.1°177.3°
O20C19C21H19120.0°120.0°
O20C19C21N2283.1°63.3°
O20C19C21H21156.9°176.8°
O20C19C21H21A36.9°56.8°
C21C19O20HO2058.3°62.4°
C19C21N22H21120.0°120.0°
C19C21N22H21A120.0°120.0°
C19C21H21H21A118.8°120.0°
C19C21N22C2396.2°63.8°
C19C21N22S3376.1°116.3°
H19C19O20HO2061.0°177.6°
H19C19C21N2236.9°56.7°
H19C19C21H2183.1°63.3°
H19C19C21H21A156.8°176.7°
N22C21H21H21A118.8°120.0°
C21N22C23S33172.4°180.0°
C21N22C23C2473.2°74.0°
C21N22C23H2346.8°165.9°
C21N22C23H23A166.8°45.9°
C21N22S33C2556.9°84.3°
C21N22S33O35174.7°29.2°
C21N22S33O3457.9°162.1°
H21C21N22C23143.8°56.2°
H21C21N22S3343.9°123.7°
H21AC21N22C2323.8°176.2°
H21AC21N22S33163.9°3.8°
N22C23C24H23120.0°120.0°
N22C23C24H23A120.0°119.9°
N22C23H23H23A119.5°119.9°
N22C23C24O36168.2°65.0°
N22C23C24H2448.2°175.0°
N22C23C24H24A71.8°55.0°
C23N22S33C25114.9°95.7°
C23N22S33O352.8°150.8°
C23N22S33O34130.2°17.8°
S33N22C23C24114.4°105.9°
S33N22C23H23125.6°14.1°
S33N22C23H23A5.6°134.1°
N22S33C25C3071.9°93.4°
N22S33C25C26106.7°86.9°
N22S33C25O35116.3°113.5°
N22S33C25O34115.7°113.6°
N22S33O35O34122.7°123.0°
C24C23H23H23A119.5°120.0°
C23C24O36H24120.0°120.0°
C23C24O36H24A120.0°120.0°
C23C24H24H24A120.0°120.0°
C23C24O36C38156.5°180.0°
H23C23C24O3671.8°55.0°
H23C23C24H24168.2°65.0°
H23C23C24H24A48.2°175.0°
H23AC23C24O3648.2°175.1°
H23AC23C24H2471.8°55.1°
H23AC23C24H24A168.2°64.9°
O36C24H24H24A120.0°119.9°
C24O36C38C37173.4°180.0°
C24O36C38H3866.6°60.0°
C24O36C38H38A53.4°60.0°
H24C24O36C3836.5°60.0°
H24AC24O36C3883.5°60.0°
C30C25C26S33178.7°179.7°
C30C25C26C270.5°0.3°
C30C25C26C32178.8°179.7°
C25C30C29C280.5°0.6°
C25C30C29C31179.5°179.4°
C25C30C29H29179.5°179.6°
C25C30C31H3190.3°87.3°
C25C30C31H31A149.7°32.8°
C25C30C31H31B29.7°152.7°
C30C25S33O3544.3°20.1°
C30C25S33O34172.4°153.0°
C25C26C27C32179.3°180.0°
C25C26C27C280.1°0.0°
C25C26C27H27179.9°180.0°
C26C25C30C290.7°0.6°
C26C25C30C31179.8°180.0°
C25C26C32H3290.3°84.6°
C25C26C32H32A149.6°155.4°
C25C26C32H32B29.7°35.4°
C26C25S33O35137.0°159.6°
C26C25S33O349.0°26.7°
S33C25C26C27179.2°180.0°
S33C25C26C320.1°0.0°
S33C25C30C29179.4°179.7°
S33C25C30C311.2°0.3°
C25S33O35O34122.9°122.9°
C26C27C28H27180.0°180.0°
C26C27C28C290.1°0.0°
C26C27C28H28179.8°179.9°
C27C26C32H3290.3°95.5°
C27C26C32H32A29.7°24.6°
C27C26C32H32B149.7°144.6°
C32C26C27C28179.3°180.0°
C32C26C27H270.8°0.0°
C26C32H32H32A120.0°120.0°
C26C32H32H32B120.0°120.0°
C26C32H32AH32B120.0°120.0°
C27C28C29H28180.0°180.0°
C27C28C29C300.1°0.3°
C27C28C29H29179.9°180.0°
H27C27C28C29179.9°180.0°
H27C27C28H280.1°0.0°
C28C29C30H29180.0°179.8°
C28C29C30C31180.0°180.0°
H28C28C29C30179.9°179.7°
H28C28C29H290.0°0.0°
C29C30C31H3190.3°93.3°
C29C30C31H31A29.7°146.6°
C29C30C31H31B149.8°26.7°
H29C29C30C310.0°0.2°
C30C31H31H31A120.0°120.1°
C30C31H31H31B120.0°120.0°
C30C31H31AH31B120.0°120.0°
H31C31H31AH31B120.0°120.0°
H32C32H32AH32B120.0°120.0°
O36C38C37H38120.0°120.0°
O36C38C37H38A120.0°120.0°
O36C38C37H37180.0°60.0°
O36C38C37H37A60.0°180.0°
O36C38C37H37B60.0°60.0°
O36C38H38H38A121.0°120.0°
C38C37H37H37A120.0°120.0°
C38C37H37H37B120.0°120.1°
C38C37H37AH37B120.0°120.0°
C37C38H38H38A121.0°120.0°
H37C37H37AH37B120.0°120.0°
H37C37C38H3860.0°60.0°
H37C37C38H38A60.0°179.9°
H37AC37C38H38180.0°60.0°
H37AC37C38H38A60.0°60.0°
H37BC37C38H3860.0°180.0°
H37BC37C38H38A180.0°60.0°

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon