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SLN

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1BPBsing1.61Å1.48Å
O1BH1Bsing0.97Å0.95Å
PBO2Bsing1.61Å1.50Å
PBO3Bdoub1.48Å1.47Å
PBO3Asing1.61Å1.56Å
O2BH2Bsing0.97Å0.95Å
O3APAsing1.61Å1.55Å
PAO1Asing1.61Å1.47Å
PAO2Adoub1.48Å1.48Å
PAO2sing1.61Å1.62Å
O1AH1Asing0.97Å0.95Å
O2C2'sing1.43Å1.44Å
C2'C1Asing1.53Å1.56Å
C2'C1'sing1.53Å1.53Å
C2'H21sing1.09Å1.11Å
C1ANBsing1.47Å1.49Å
C1AH1AAsing1.09Å1.10Å
C1AH2AAsing1.09Å1.11Å
NBC1Bsing1.35Å1.48Å
NBHNBsing0.97Å1.01Å
C1BOCdoub1.21Å1.23Å
C1BCAsing1.51Å1.54Å
CACBsing1.55Å1.54Å
CACEsing1.54Å1.54Å
CAHCAsing1.09Å1.08Å
CBCCsing1.55Å1.54Å
CBHCB1sing1.09Å1.09Å
CBHCB2sing1.09Å1.09Å
CCCC1sing1.53Å1.53Å
CCCC2sing1.53Å1.53Å
CCNDsing1.48Å1.49Å
CC1H1CCsing1.09Å1.09Å
CC1H2CCsing1.09Å1.09Å
CC1H3CCsing1.09Å1.09Å
CC2H4CCsing1.09Å1.09Å
CC2H5CCsing1.09Å1.09Å
CC2H6CCsing1.09Å1.09Å
NDORsing1.46Å1.31Å
NDCEsing1.48Å1.48Å
ORHORsing0.97Å0.97Å
CECE1sing1.53Å1.55Å
CECE2sing1.53Å1.54Å
CE1H1CEsing1.09Å1.09Å
CE1H2CEsing1.09Å1.09Å
CE1H3CEsing1.09Å1.09Å
CE2H4CEsing1.09Å1.09Å
CE2H5CEsing1.09Å1.09Å
CE2H6CEsing1.09Å1.09Å
C1'N1sing1.46Å1.49Å
C1'H11sing1.09Å1.10Å
C1'H12sing1.09Å1.09Å
N1CB1sing1.36Å1.43Å
N1HN1sing0.97Å1.03Å
CB1CB2doub1.41Å1.41ÅAromatic
CB1CB6sing1.41Å1.38ÅAromatic
CB2NN1sing1.48Å1.38Å
CB2CB3sing1.35Å1.41ÅAromatic
NN1ON1sing1.32Å1.23Å
NN1ON2doub1.32Å1.24Å
CB3CB4doub1.48Å1.39ÅAromatic
CB3HB3sing1.08Å1.08Å
CB4NA1sing1.31Å1.44Å
CB4CB5sing1.48Å1.42ÅAromatic
NA1NA2doub1.12Å1.45Å
NA2NA3doub1.12Å1.37Å
CB5CB6doub1.35Å1.41ÅAromatic
CB5HB5sing1.08Å1.07Å
CB6HB6sing1.08Å1.09Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
PBO1BH1B116.2°106.8°
O1BPBO2B116.2°109.5°
O1BPBO3B112.4°109.4°
O1BPBO3A103.7°109.5°
O2BPBO3B112.0°109.5°
O2BPBO3A110.6°109.5°
PBO2BH2B116.2°106.8°
O3BPBO3A100.4°109.5°
PBO3APA120.1°106.8°
O3APAO1A111.1°109.4°
O3APAO2A108.1°109.5°
O3APAO2102.5°109.5°
O1APAO2A117.4°109.4°
O1APAO2107.9°109.5°
PAO1AH1A111.1°106.8°
O2APAO2108.8°109.5°
PAO2C2'124.2°106.8°
O2C2'C1A110.7°109.4°
O2C2'C1'104.4°109.5°
O2C2'H21110.4°109.5°
C1AC2'C1'110.8°109.4°
C1AC2'H21110.8°109.4°
C2'C1ANB114.2°109.4°
C2'C1AH1AA105.6°109.4°
C2'C1AH2AA107.4°109.4°
C1'C2'H21109.6°109.5°
C2'C1'N1110.3°109.5°
C2'C1'H11107.9°109.5°
C2'C1'H12108.9°109.5°
NBC1AH1AA106.7°109.5°
NBC1AH2AA114.1°109.5°
C1ANBC1B113.8°119.9°
C1ANBHNB106.6°120.0°
H1AAC1AH2AA108.4°109.5°
C1BNBHNB105.0°120.1°
NBC1BOC119.9°120.0°
NBC1BCA121.1°120.0°
OCC1BCA118.7°120.0°
C1BCACB110.7°110.3°
C1BCACE115.8°110.4°
C1BCAHCA107.5°110.3°
CBCACE103.9°105.1°
CBCAHCA109.4°110.3°
CACBCC104.6°102.9°
CACBHCB1112.1°110.7°
CACBHCB2109.1°110.8°
CECAHCA109.5°110.3°
CACEND104.8°107.2°
CACECE1108.2°109.9°
CACECE2113.9°109.9°
CCCBHCB1111.0°110.7°
CCCBHCB2110.5°110.7°
CBCCCC1108.3°110.7°
CBCCCC2112.7°110.7°
CBCCND107.9°103.4°
HCB1CBHCB2109.5°110.8°
CC1CCCC2106.8°110.6°
CC1CCND112.2°110.7°
CCCC1H1CC110.9°109.5°
CCCC1H2CC109.0°109.5°
CCCC1H3CC110.2°109.5°
CC2CCND109.0°110.7°
CCCC2H4CC111.0°109.5°
CCCC2H5CC111.1°109.5°
CCCC2H6CC108.2°109.5°
CCNDOR120.3°107.0°
CCNDCE107.8°105.7°
H1CCCC1H2CC107.7°109.5°
H1CCCC1H3CC108.9°109.4°
H2CCCC1H3CC110.2°109.5°
H4CCCC2H5CC108.9°109.5°
H4CCCC2H6CC110.3°109.5°
H5CCCC2H6CC107.2°109.5°
ORNDCE119.7°106.7°
NDORHOR111.5°106.8°
NDCECE1111.5°109.8°
NDCECE2111.8°110.2°
CE1CECE2106.7°109.9°
CECE1H1CE110.0°109.5°
CECE1H2CE111.5°109.4°
CECE1H3CE109.9°109.5°
CECE2H4CE110.5°109.5°
CECE2H5CE109.9°109.5°
CECE2H6CE109.8°109.5°
H1CECE1H2CE108.1°109.5°
H1CECE1H3CE109.0°109.5°
H2CECE1H3CE108.3°109.4°
H4CECE2H5CE109.5°109.5°
H4CECE2H6CE108.2°109.4°
H5CECE2H6CE108.9°109.4°
N1C1'H11110.4°109.4°
N1C1'H12110.0°109.4°
C1'N1CB1108.0°120.1°
C1'N1HN1108.4°120.0°
H11C1'H12109.2°109.4°
CB1N1HN1104.1°120.0°
N1CB1CB2124.6°119.2°
N1CB1CB6115.0°119.1°
CB2CB1CB6120.1°121.7°
CB1CB2NN1122.2°119.6°
CB1CB2CB3118.2°120.9°
CB1CB6CB5121.7°120.8°
CB1CB6HB6119.8°119.6°
NN1CB2CB3119.6°119.6°
CB2NN1ON1119.5°120.0°
CB2NN1ON2119.9°120.0°
CB2CB3CB4121.9°119.1°
CB2CB3HB3121.9°120.5°
ON1NN1ON2117.7°120.0°
CB4CB3HB3116.2°120.4°
CB3CB4NA1119.0°120.7°
CB3CB4CB5119.4°118.5°
NA1CB4CB5121.4°120.8°
CB4NA1NA2111.1°120.0°
CB4CB5CB6118.1°119.1°
CB4CB5HB5121.4°120.4°
NA1NA2NA3173.7°179.9°
CB6CB5HB5120.3°120.4°
CB5CB6HB6118.4°119.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1BPBO2BO3B131.2°120.0°
O1BPBO2BO3A117.8°120.0°
O1BPBO3BO3A109.6°120.0°
O1BPBO2BH2B180.0°60.0°
O1BPBO3APA95.4°165.0°
H1BO1BPBO2B180.0°60.0°
H1BO1BPBO3B49.1°60.0°
H1BO1BPBO3A58.5°180.0°
O2BPBO3BO3A117.3°120.0°
O2BPBO3APA29.8°75.0°
O3BPBO2BH2B48.9°179.9°
O3BPBO3APA148.2°45.0°
O3APBO2BH2B62.2°60.0°
PBO3APAO1A56.1°75.0°
PBO3APAO2A74.1°44.9°
PBO3APAO2171.1°165.0°
O3APAO1AO2A125.1°119.9°
O3APAO1AO2111.6°120.0°
O3APAO2AO2110.6°120.0°
O3APAO1AH1A180.0°60.1°
O3APAO2C2'73.3°175.0°
O1APAO2AO2122.8°120.0°
O1APAO2C2'169.3°65.0°
O2APAO1AH1A54.9°180.0°
O2APAO2C2'41.0°54.9°
O2PAO1AH1A68.3°59.9°
PAO2C2'C1A57.2°120.1°
PAO2C2'C1'176.4°120.0°
PAO2C2'H2165.9°0.1°
O2C2'C1AC1'115.3°120.0°
O2C2'C1AH21122.8°120.0°
O2C2'C1'H21118.3°120.1°
O2C2'C1ANB150.4°65.0°
O2C2'C1AH1AA92.7°54.9°
O2C2'C1AH2AA22.8°175.0°
O2C2'C1'N158.6°60.1°
O2C2'C1'H1162.1°59.9°
O2C2'C1'H12179.4°179.9°
C1AC2'C1'H21122.5°119.9°
C2'C1ANBH1AA116.2°119.9°
C2'C1ANBH2AA124.0°120.0°
C2'C1AH1AAH2AA114.8°120.0°
C2'C1ANBC1B102.0°180.0°
C2'C1ANBHNB142.7°0.0°
C1AC2'C1'N1177.8°180.0°
C1AC2'C1'H1157.1°60.0°
C1AC2'C1'H1261.4°60.0°
C1'C2'C1ANB35.1°175.0°
C1'C2'C1AH1AA151.9°65.0°
C1'C2'C1AH2AA92.5°55.0°
C2'C1'N1H11119.2°120.0°
C2'C1'N1H12120.2°120.1°
C2'C1'H11H12118.3°120.1°
C2'C1'N1CB1152.4°180.0°
C2'C1'N1HN140.2°0.0°
H21C2'C1ANB86.8°55.0°
H21C2'C1AH1AA30.1°175.0°
H21C2'C1AH2AA145.6°65.0°
H21C2'C1'N159.7°60.0°
H21C2'C1'H11179.6°180.0°
H21C2'C1'H1261.2°60.0°
NBC1AH1AAH2AA123.3°120.1°
C1ANBC1BHNB116.2°180.0°
C1ANBC1BOC11.0°0.0°
C1ANBC1BCA175.7°180.0°
H1AAC1ANBC1B141.8°60.1°
H1AAC1ANBHNB26.4°119.9°
H2AAC1ANBC1B22.0°60.0°
H2AAC1ANBHNB93.3°120.0°
NBC1BOCCA173.5°180.0°
NBC1BCACB117.4°146.9°
NBC1BCACE124.8°97.4°
NBC1BCAHCA2.1°24.8°
HNBNBC1BOC105.2°180.0°
HNBNBC1BCA68.1°0.0°
OCC1BCACB56.1°33.1°
OCC1BCACE61.8°82.6°
OCC1BCAHCA175.5°155.2°
C1BCACBCE124.9°119.0°
C1BCACBHCA118.2°122.1°
C1BCACEHCA121.6°122.1°
C1BCACBCC98.7°141.0°
C1BCACBHCB121.6°100.7°
C1BCACBHCB2143.1°22.5°
C1BCACEND87.8°117.9°
C1BCACECE1153.2°122.9°
C1BCACECE234.7°1.8°
CBCACEHCA116.8°118.9°
CACBCCHCB1121.0°118.3°
CACBCCHCB2117.3°118.4°
CACBHCB1HCB2121.3°123.3°
CACBCCCC1131.3°155.9°
CACBCCCC2110.8°81.2°
CACBCCND9.7°37.3°
CBCACEND33.7°1.0°
CBCACECE185.3°118.2°
CBCACECE2156.2°120.8°
CECACBCC26.2°22.0°
CECACBHCB1146.5°140.3°
CECACBHCB292.0°96.4°
CACENDCC28.3°25.0°
CACENDOR171.0°138.7°
CACENDCE1116.7°119.3°
CACENDCE2123.9°119.6°
CACECE1CE2123.0°121.1°
CACECE1H1CE69.4°64.2°
CACECE1H2CE50.6°175.8°
CACECE1H3CE170.6°55.8°
CACECE2H4CE65.5°64.5°
CACECE2H5CE55.5°175.4°
CACECE2H6CE175.2°55.4°
HCACACBCC143.1°96.9°
HCACACBHCB196.6°21.4°
HCACACBHCB224.9°144.7°
HCACACEND150.6°120.0°
HCACACECE131.6°0.8°
HCACACECE286.9°120.3°
CCCBHCB1HCB2122.2°123.2°
CBCCCC1CC2121.7°123.0°
CBCCCC1ND119.0°114.0°
CBCCCC2ND119.8°114.0°
CBCCCC1H1CC61.0°177.7°
CBCCCC1H2CC179.4°57.7°
CBCCCC1H3CC59.6°62.3°
CBCCCC2H4CC65.8°72.8°
CBCCCC2H5CC55.6°47.2°
CBCCCC2H6CC173.1°167.2°
CBCCNDOR154.1°152.4°
CBCCNDCE11.7°38.9°
HCB1CBCCCC1107.7°85.8°
HCB1CBCCCC210.2°37.1°
HCB1CBCCND130.7°155.7°
HCB2CBCCCC114.0°37.5°
HCB2CBCCCC2131.9°160.4°
HCB2CBCCND107.6°81.1°
CC1CCCC2ND121.4°123.0°
CCCC1H1CCH2CC119.2°120.0°
CCCC1H1CCH3CC121.3°120.0°
CCCC1H2CCH3CC121.0°120.0°
CC1CCCC2H4CC53.0°50.2°
CC1CCCC2H5CC174.4°170.2°
CC1CCCC2H6CC68.2°69.8°
CC1CCNDOR34.9°89.0°
CC1CCNDCE107.5°157.5°
CC2CCCC1H1CC177.4°59.3°
CC2CCCC1H2CC59.0°179.3°
CC2CCCC1H3CC62.1°60.7°
CCCC2H4CCH5CC122.7°120.0°
CCCC2H4CCH6CC119.9°120.0°
CCCC2H5CCH6CC118.1°120.0°
CC2CCNDOR83.2°33.9°
CC2CCNDCE134.5°79.6°
NDCCCC1H1CC58.0°63.7°
NDCCCC1H2CC60.4°56.4°
NDCCCC1H3CC178.6°176.3°
NDCCCC2H4CC174.4°173.2°
NDCCCC2H5CC64.2°66.8°
NDCCCC2H6CC53.2°53.2°
CCNDORCE138.0°112.8°
CCNDORHOR127.6°67.2°
CCNDCECE188.4°94.3°
CCNDCECE2152.2°144.6°
H1CCCC1H2CCH3CC118.6°120.0°
H4CCCC2H5CCH6CC119.3°120.0°
ORNDCECE154.2°19.4°
ORNDCECE265.1°101.7°
CENDORHOR10.4°180.0°
NDCECE1CE2122.3°121.3°
NDCECE1H1CE175.9°178.2°
NDCECE1H2CE64.1°58.2°
NDCECE1H3CE55.9°61.8°
NDCECE2H4CE53.1°53.4°
NDCECE2H5CE174.0°66.7°
NDCECE2H6CE66.2°173.3°
CECE1H1CEH2CE121.9°120.0°
CECE1H1CEH3CE120.6°120.0°
CECE1H2CEH3CE121.0°119.9°
CE1CECE2H4CE175.2°174.4°
CE1CECE2H5CE63.8°54.4°
CE1CECE2H6CE55.9°65.6°
CE2CECE1H1CE53.6°56.9°
CE2CECE1H2CE173.5°63.1°
CE2CECE1H3CE66.4°176.9°
CECE2H4CEH5CE121.2°120.0°
CECE2H4CEH6CE120.3°120.0°
CECE2H5CEH6CE120.3°120.0°
H1CECE1H2CEH3CE117.9°120.0°
H4CECE2H5CEH6CE118.1°120.0°
N1C1'H11H12121.1°119.9°
C1'N1CB1HN1115.0°180.0°
C1'N1CB1CB2100.0°173.0°
C1'N1CB1CB674.0°7.4°
H11C1'N1CB133.2°59.9°
H11C1'N1HN178.9°120.0°
H12C1'N1CB187.4°60.0°
H12C1'N1HN1160.4°120.1°
N1CB1CB2CB6173.7°179.6°
N1CB1CB2NN115.3°0.3°
N1CB1CB2CB3165.7°179.7°
N1CB1CB6CB5170.9°180.0°
N1CB1CB6HB65.9°0.0°
HN1N1CB1CB215.0°7.0°
HN1N1CB1CB6171.0°172.6°
CB1CB2NN1CB3179.1°179.4°
CB1CB2NN1ON18.2°141.6°
CB1CB2NN1ON2168.6°38.3°
CB1CB2CB3CB46.3°0.6°
CB1CB2CB3HB3172.9°179.7°
CB2CB1CB6CB53.4°0.3°
CB2CB1CB6HB6179.9°179.7°
CB6CB1CB2NN1171.1°180.0°
CB6CB1CB2CB38.0°0.6°
CB1CB6CB5CB43.1°0.0°
CB1CB6CB5HB6176.8°180.0°
CB1CB6CB5HB5178.0°180.0°
CB2NN1ON1ON2160.9°179.9°
NN1CB2CB3CB4172.8°180.0°
NN1CB2CB3HB38.0°0.3°
CB3CB2NN1ON1170.9°39.1°
CB3CB2NN1ON210.5°141.0°
CB2CB3CB4HB3179.2°179.7°
CB2CB3CB4NA1175.8°179.7°
CB2CB3CB4CB50.1°0.3°
CB3CB4NA1CB5175.5°180.0°
CB3CB4NA1NA2123.7°180.0°
CB3CB4CB5CB64.8°0.0°
CB3CB4CB5HB5179.7°180.0°
HB3CB3CB4NA15.0°0.0°
HB3CB3CB4CB5179.4°180.0°
CB4NA1NA2NA362.9°94.0°
NA1CB4CB5CB6179.7°180.0°
NA1CB4CB5HB54.8°0.0°
CB5CB4NA1NA260.8°0.0°
CB4CB5CB6HB5174.9°180.0°
CB4CB5CB6HB6173.7°180.0°
HB5CB5CB6HB61.2°0.0°

224931

PDB entries from 2024-09-11

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