SL5
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C | O | doub | 1.21Å | 1.28Å | |
| C | CA | sing | 1.51Å | 1.49Å | |
| C | OXT | sing | 1.34Å | 1.33Å | |
| N | C5 | sing | 1.48Å | 1.47Å | |
| N | CA | sing | 1.48Å | 1.47Å | |
| C5 | C6 | sing | 1.53Å | 1.52Å | |
| C5 | OG1 | sing | 1.44Å | 1.41Å | |
| C6 | O7 | sing | 1.43Å | 1.42Å | |
| O7 | C8 | sing | 1.43Å | 1.53Å | |
| C8 | C9 | sing | 1.53Å | 1.50Å | |
| CA | CB | sing | 1.54Å | 1.51Å | |
| CB | OG1 | sing | 1.45Å | 1.42Å | |
| CB | CG2 | sing | 1.53Å | 1.54Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| C5 | H5 | sing | 1.09Å | 1.10Å | |
| C6 | H6 | sing | 1.09Å | 1.10Å | |
| C6 | H6A | sing | 1.09Å | 1.10Å | |
| C8 | H8 | sing | 1.09Å | 1.10Å | |
| C8 | H8A | sing | 1.09Å | 1.10Å | |
| C9 | H9A | sing | 1.09Å | 1.10Å | |
| C9 | H9B | sing | 1.09Å | 1.10Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | HB | sing | 1.09Å | 1.10Å | |
| C9 | O10 | sing | 1.43Å | 1.87Å | |
| O10 | HO10 | sing | 0.97Å | 0.95Å | |
| CG2 | HG2 | sing | 1.09Å | 1.10Å | |
| CG2 | HG2A | sing | 1.09Å | 1.10Å | |
| CG2 | HG2B | sing | 1.09Å | 1.10Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O | C | CA | 119.2° | 120.0° |
| O | C | OXT | 119.3° | 120.0° |
| CA | C | OXT | 121.4° | 120.0° |
| C | CA | N | 116.3° | 110.4° |
| C | CA | CB | 111.9° | 110.4° |
| C | CA | HA | 107.8° | 110.3° |
| C | OXT | HXT | 109.5° | 117.0° |
| C5 | N | CA | 103.4° | 105.8° |
| N | C5 | C6 | 120.8° | 110.2° |
| N | C5 | OG1 | 102.1° | 105.7° |
| C5 | N | H | 111.0° | 111.0° |
| N | C5 | H5 | 110.0° | 110.2° |
| N | CA | CB | 104.7° | 104.7° |
| CA | N | H | 111.0° | 111.0° |
| N | CA | HA | 108.1° | 110.3° |
| C6 | C5 | OG1 | 103.1° | 110.2° |
| C5 | C6 | O7 | 104.7° | 109.5° |
| C6 | C5 | H5 | 109.2° | 110.2° |
| C5 | C6 | H6 | 110.6° | 109.5° |
| C5 | C6 | H6A | 110.7° | 109.5° |
| C5 | OG1 | CB | 111.5° | 104.1° |
| OG1 | C5 | H5 | 110.9° | 110.3° |
| C6 | O7 | C8 | 137.8° | 114.0° |
| O7 | C6 | H6 | 110.7° | 109.5° |
| O7 | C6 | H6A | 110.6° | 109.5° |
| O7 | C8 | C9 | 130.1° | 109.5° |
| O7 | C8 | H8 | 104.1° | 109.5° |
| O7 | C8 | H8A | 104.1° | 109.5° |
| C9 | C8 | H8 | 104.1° | 109.5° |
| C9 | C8 | H8A | 104.1° | 109.4° |
| C8 | C9 | H9A | 112.4° | 109.5° |
| C8 | C9 | H9B | 112.4° | 109.4° |
| C8 | C9 | O10 | 97.5° | 109.4° |
| CA | CB | OG1 | 103.3° | 103.6° |
| CA | CB | CG2 | 111.8° | 110.6° |
| CB | CA | HA | 107.7° | 110.5° |
| CA | CB | HB | 110.2° | 110.6° |
| OG1 | CB | CG2 | 110.4° | 110.6° |
| OG1 | CB | HB | 111.4° | 110.6° |
| CG2 | CB | HB | 109.7° | 110.7° |
| CB | CG2 | HG2 | 109.5° | 109.5° |
| CB | CG2 | HG2A | 109.5° | 109.5° |
| CB | CG2 | HG2B | 109.5° | 109.4° |
| H6 | C6 | H6A | 109.5° | 109.4° |
| H8 | C8 | H8A | 109.5° | 109.5° |
| H9A | C9 | H9B | 109.5° | 109.5° |
| H9A | C9 | O10 | 112.4° | 109.5° |
| H9B | C9 | O10 | 112.4° | 109.4° |
| C9 | O10 | HO10 | 109.5° | 114.0° |
| HG2 | CG2 | HG2A | 109.4° | 109.6° |
| HG2 | CG2 | HG2B | 109.5° | 109.4° |
| HG2A | CG2 | HG2B | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O | C | CA | OXT | 179.5° | 179.7° |
| O | C | CA | N | 176.7° | 18.6° |
| O | C | CA | CB | 56.5° | 96.7° |
| O | C | CA | HA | 61.7° | 140.8° |
| O | C | OXT | HXT | 0.0° | 0.0° |
| C | CA | N | C5 | 90.5° | 117.9° |
| C | CA | N | CB | 124.1° | 118.9° |
| C | CA | N | HA | 121.4° | 122.2° |
| C | CA | CB | HA | 118.3° | 122.4° |
| C | CA | CB | OG1 | 111.4° | 141.5° |
| C | CA | CB | CG2 | 129.9° | 100.0° |
| C | CA | N | H | 28.6° | 2.7° |
| C | CA | CB | HB | 7.6° | 23.0° |
| CA | C | OXT | HXT | 179.5° | 179.7° |
| OXT | C | CA | N | 3.8° | 161.7° |
| OXT | C | CA | CB | 124.0° | 83.0° |
| OXT | C | CA | HA | 117.8° | 39.5° |
| C5 | N | CA | H | 119.0° | 120.5° |
| N | C5 | C6 | OG1 | 112.9° | 116.2° |
| N | C5 | C6 | H5 | 129.1° | 121.8° |
| N | C5 | OG1 | H5 | 117.2° | 119.1° |
| N | C5 | C6 | O7 | 84.6° | 60.0° |
| C5 | N | CA | CB | 33.6° | 1.0° |
| N | C5 | OG1 | CB | 30.3° | 39.8° |
| N | C5 | C6 | H6 | 156.1° | 60.0° |
| N | C5 | C6 | H6A | 34.6° | 180.0° |
| C5 | N | CA | HA | 148.1° | 119.9° |
| CA | N | C5 | C6 | 152.1° | 143.7° |
| CA | N | C5 | OG1 | 38.7° | 24.6° |
| N | CA | CB | HA | 114.9° | 118.8° |
| N | CA | CB | OG1 | 15.4° | 22.7° |
| N | CA | CB | CG2 | 103.3° | 141.2° |
| CA | N | C5 | H5 | 79.1° | 94.5° |
| N | CA | CB | HB | 134.5° | 95.8° |
| C6 | C5 | OG1 | H5 | 116.8° | 121.9° |
| C5 | C6 | O7 | H6 | 119.3° | 120.0° |
| C5 | C6 | O7 | H6A | 119.3° | 120.0° |
| C5 | C6 | O7 | C8 | 154.9° | 180.0° |
| C6 | C5 | OG1 | CB | 156.3° | 158.8° |
| C6 | C5 | N | H | 88.8° | 95.8° |
| C5 | C6 | H6 | H6A | 122.2° | 120.0° |
| OG1 | C5 | C6 | O7 | 162.5° | 56.2° |
| C5 | OG1 | CB | CA | 9.5° | 38.2° |
| C5 | OG1 | CB | CG2 | 129.1° | 156.7° |
| OG1 | C5 | N | H | 157.7° | 145.1° |
| OG1 | C5 | C6 | H6 | 43.2° | 176.3° |
| OG1 | C5 | C6 | H6A | 78.3° | 63.8° |
| C5 | OG1 | CB | HB | 108.7° | 80.3° |
| C6 | O7 | C8 | C9 | 176.4° | 180.0° |
| O7 | C6 | C5 | H5 | 44.5° | 178.2° |
| O7 | C6 | H6 | H6A | 122.2° | 120.0° |
| C6 | O7 | C8 | H8 | 60.9° | 60.0° |
| C6 | O7 | C8 | H8A | 53.7° | 60.0° |
| O7 | C8 | C9 | H8 | 122.6° | 120.0° |
| O7 | C8 | C9 | H8A | 122.7° | 120.0° |
| C8 | O7 | C6 | H6 | 35.6° | 60.0° |
| C8 | O7 | C6 | H6A | 85.9° | 60.0° |
| O7 | C8 | H8 | H8A | 110.8° | 120.0° |
| O7 | C8 | C9 | H9A | 49.4° | 175.0° |
| O7 | C8 | C9 | H9B | 74.7° | 55.0° |
| O7 | C8 | C9 | O10 | 167.3° | 65.0° |
| C9 | C8 | H8 | H8A | 110.8° | 120.0° |
| C8 | C9 | H9A | H9B | 125.6° | 120.0° |
| C8 | C9 | H9A | O10 | 108.8° | 120.0° |
| C8 | C9 | H9B | O10 | 108.8° | 119.9° |
| C8 | C9 | O10 | HO10 | 180.0° | 180.0° |
| CA | CB | OG1 | CG2 | 119.6° | 118.5° |
| CA | CB | OG1 | HB | 118.2° | 118.5° |
| CA | CB | CG2 | HB | 122.5° | 122.9° |
| CB | CA | N | H | 152.6° | 121.5° |
| CA | CB | CG2 | HG2 | 180.0° | 59.9° |
| CA | CB | CG2 | HG2A | 60.0° | 180.0° |
| CA | CB | CG2 | HG2B | 60.0° | 60.0° |
| OG1 | CB | CG2 | HB | 123.1° | 122.9° |
| CB | OG1 | C5 | H5 | 86.8° | 79.3° |
| OG1 | CB | CA | HA | 130.3° | 96.1° |
| OG1 | CB | CG2 | HG2 | 65.7° | 54.3° |
| OG1 | CB | CG2 | HG2A | 174.3° | 65.8° |
| OG1 | CB | CG2 | HG2B | 54.3° | 174.2° |
| CG2 | CB | CA | HA | 11.6° | 22.4° |
| CB | CG2 | HG2 | HG2A | 120.0° | 120.0° |
| CB | CG2 | HG2 | HG2B | 120.0° | 119.9° |
| CB | CG2 | HG2A | HG2B | 120.0° | 119.9° |
| H | N | C5 | H5 | 39.9° | 26.0° |
| H | N | CA | HA | 92.8° | 119.5° |
| H5 | C5 | C6 | H6 | 74.8° | 61.8° |
| H5 | C5 | C6 | H6A | 163.7° | 58.1° |
| H8 | C8 | C9 | H9A | 172.0° | 65.0° |
| H8 | C8 | C9 | H9B | 48.0° | 175.0° |
| H8 | C8 | C9 | O10 | 70.0° | 55.1° |
| H8A | C8 | C9 | H9A | 73.3° | 55.0° |
| H8A | C8 | C9 | H9B | 162.6° | 65.0° |
| H8A | C8 | C9 | O10 | 44.7° | 175.0° |
| H9A | C9 | H9B | O10 | 125.6° | 120.1° |
| H9A | C9 | O10 | HO10 | 62.0° | 60.0° |
| H9B | C9 | O10 | HO10 | 62.0° | 60.1° |
| HA | CA | CB | HB | 110.6° | 145.4° |
| HB | CB | CG2 | HG2 | 57.5° | 177.2° |
| HB | CB | CG2 | HG2A | 62.5° | 57.1° |
| HB | CB | CG2 | HG2B | 177.5° | 62.9° |
| HG2 | CG2 | HG2A | HG2B | 120.0° | 120.0° |
