SIU
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O7 | C5 | doub | 1.21Å | 1.27Å | |
O10 | C5 | sing | 1.34Å | 1.26Å | |
C5 | C1 | sing | 1.51Å | 1.53Å | |
C1 | C27 | sing | 1.53Å | 1.53Å | |
C1 | C2 | sing | 1.53Å | 1.54Å | |
C8 | C3 | sing | 1.51Å | 1.52Å | |
C8 | C9 | sing | 1.51Å | 1.51Å | |
N4 | C3 | sing | 1.35Å | 1.37Å | |
N4 | C2 | sing | 1.46Å | 1.46Å | |
C3 | O14 | doub | 1.21Å | 1.23Å | |
C12 | C9 | doub | 1.38Å | 1.40Å | Aromatic |
C12 | C15 | sing | 1.39Å | 1.40Å | Aromatic |
C2 | C6 | sing | 1.51Å | 1.53Å | |
C20 | C15 | sing | 1.51Å | 1.51Å | |
C20 | C19 | sing | 1.53Å | 1.53Å | |
C9 | C13 | sing | 1.38Å | 1.40Å | Aromatic |
C15 | C16 | doub | 1.38Å | 1.41Å | Aromatic |
C19 | C18 | sing | 1.53Å | 1.52Å | |
C6 | C21 | doub | 1.38Å | 1.40Å | Aromatic |
C6 | C25 | sing | 1.38Å | 1.41Å | Aromatic |
C13 | C11 | doub | 1.38Å | 1.40Å | Aromatic |
C21 | C22 | sing | 1.38Å | 1.40Å | Aromatic |
C16 | C11 | sing | 1.39Å | 1.40Å | Aromatic |
C16 | C17 | sing | 1.51Å | 1.51Å | |
C25 | C24 | doub | 1.38Å | 1.40Å | Aromatic |
C18 | C17 | sing | 1.53Å | 1.53Å | |
C22 | C23 | doub | 1.38Å | 1.40Å | Aromatic |
C24 | C23 | sing | 1.38Å | 1.40Å | Aromatic |
C23 | C26 | sing | 1.51Å | 1.50Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
C8 | H3 | sing | 1.09Å | 1.10Å | |
C8 | H4 | sing | 1.09Å | 1.10Å | |
C11 | H5 | sing | 1.08Å | 1.08Å | |
C12 | H6 | sing | 1.08Å | 1.08Å | |
C13 | H7 | sing | 1.08Å | 1.08Å | |
C17 | H8 | sing | 1.09Å | 1.10Å | |
C17 | H9 | sing | 1.09Å | 1.10Å | |
C18 | H10 | sing | 1.09Å | 1.10Å | |
C18 | H11 | sing | 1.09Å | 1.10Å | |
C19 | H12 | sing | 1.09Å | 1.10Å | |
C19 | H13 | sing | 1.09Å | 1.10Å | |
C20 | H14 | sing | 1.09Å | 1.10Å | |
C20 | H15 | sing | 1.09Å | 1.10Å | |
C21 | H16 | sing | 1.08Å | 1.08Å | |
C22 | H17 | sing | 1.08Å | 1.08Å | |
C24 | H18 | sing | 1.08Å | 1.08Å | |
C25 | H19 | sing | 1.08Å | 1.08Å | |
C26 | H20 | sing | 1.09Å | 1.10Å | |
C26 | H21 | sing | 1.09Å | 1.10Å | |
C26 | H22 | sing | 1.09Å | 1.10Å | |
C27 | H23 | sing | 1.09Å | 1.10Å | |
C27 | H24 | sing | 1.09Å | 1.10Å | |
C27 | H25 | sing | 1.09Å | 1.10Å | |
N4 | H26 | sing | 0.97Å | 1.00Å | |
O10 | H27 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O7 | C5 | O10 | 129.2° | 120.0° |
O7 | C5 | C1 | 115.4° | 120.0° |
O10 | C5 | C1 | 115.5° | 120.0° |
C5 | O10 | H27 | 109.5° | 117.0° |
C5 | C1 | C27 | 108.0° | 109.5° |
C5 | C1 | C2 | 106.5° | 109.5° |
C5 | C1 | H1 | 108.7° | 109.5° |
C27 | C1 | C2 | 116.1° | 109.5° |
C27 | C1 | H1 | 108.7° | 109.5° |
C1 | C27 | H23 | 109.5° | 109.5° |
C1 | C27 | H24 | 109.5° | 109.5° |
C1 | C27 | H25 | 109.5° | 109.5° |
C1 | C2 | N4 | 111.3° | 109.4° |
C1 | C2 | C6 | 111.6° | 109.4° |
C2 | C1 | H1 | 108.6° | 109.5° |
C1 | C2 | H2 | 106.9° | 109.4° |
C3 | C8 | C9 | 112.2° | 109.5° |
C8 | C3 | N4 | 113.7° | 120.0° |
C8 | C3 | O14 | 122.5° | 120.0° |
C3 | C8 | H3 | 108.8° | 109.5° |
C3 | C8 | H4 | 108.8° | 109.5° |
C8 | C9 | C12 | 120.5° | 120.1° |
C8 | C9 | C13 | 120.5° | 120.1° |
C9 | C8 | H3 | 108.8° | 109.5° |
C9 | C8 | H4 | 108.8° | 109.5° |
C3 | N4 | C2 | 123.4° | 120.0° |
N4 | C3 | O14 | 123.8° | 120.0° |
C3 | N4 | H26 | 118.3° | 119.9° |
N4 | C2 | C6 | 111.8° | 109.5° |
N4 | C2 | H2 | 107.9° | 109.5° |
C2 | N4 | H26 | 118.3° | 120.0° |
C9 | C12 | C15 | 121.1° | 120.5° |
C12 | C9 | C13 | 119.0° | 119.8° |
C9 | C12 | H6 | 119.5° | 119.7° |
C12 | C15 | C20 | 118.7° | 117.7° |
C12 | C15 | C16 | 119.5° | 119.7° |
C15 | C12 | H6 | 119.4° | 119.7° |
C2 | C6 | C21 | 122.1° | 120.0° |
C2 | C6 | C25 | 119.9° | 120.0° |
C6 | C2 | H2 | 107.0° | 109.5° |
C15 | C20 | C19 | 113.1° | 110.6° |
C20 | C15 | C16 | 121.7° | 122.5° |
C15 | C20 | H14 | 108.5° | 109.3° |
C15 | C20 | H15 | 108.6° | 109.2° |
C20 | C19 | C18 | 110.3° | 108.4° |
C20 | C19 | H12 | 109.2° | 109.7° |
C20 | C19 | H13 | 109.3° | 109.8° |
C19 | C20 | H14 | 108.6° | 109.2° |
C19 | C20 | H15 | 108.5° | 109.3° |
C9 | C13 | C11 | 120.4° | 119.7° |
C9 | C13 | H7 | 119.8° | 120.1° |
C15 | C16 | C11 | 119.4° | 119.7° |
C15 | C16 | C17 | 121.6° | 122.6° |
C19 | C18 | C17 | 110.5° | 108.4° |
C19 | C18 | H10 | 109.2° | 109.7° |
C19 | C18 | H11 | 109.2° | 109.7° |
C18 | C19 | H12 | 109.3° | 109.6° |
C18 | C19 | H13 | 109.2° | 109.7° |
C21 | C6 | C25 | 118.0° | 120.0° |
C6 | C21 | C22 | 121.0° | 120.0° |
C6 | C21 | H16 | 119.5° | 120.0° |
C6 | C25 | C24 | 121.2° | 120.0° |
C6 | C25 | H19 | 119.4° | 120.0° |
C13 | C11 | C16 | 120.6° | 120.5° |
C13 | C11 | H5 | 119.7° | 119.7° |
C11 | C13 | H7 | 119.8° | 120.1° |
C21 | C22 | C23 | 120.6° | 120.0° |
C22 | C21 | H16 | 119.5° | 120.0° |
C21 | C22 | H17 | 119.7° | 120.0° |
C11 | C16 | C17 | 119.1° | 117.7° |
C16 | C11 | H5 | 119.7° | 119.8° |
C16 | C17 | C18 | 113.4° | 110.6° |
C16 | C17 | H8 | 108.5° | 109.3° |
C16 | C17 | H9 | 108.5° | 109.2° |
C25 | C24 | C23 | 120.3° | 120.0° |
C25 | C24 | H18 | 119.8° | 120.0° |
C24 | C25 | H19 | 119.4° | 120.0° |
C18 | C17 | H8 | 108.5° | 109.3° |
C18 | C17 | H9 | 108.5° | 109.2° |
C17 | C18 | H10 | 109.2° | 109.7° |
C17 | C18 | H11 | 109.2° | 109.6° |
C22 | C23 | C24 | 118.9° | 120.0° |
C22 | C23 | C26 | 120.6° | 120.0° |
C23 | C22 | H17 | 119.7° | 120.0° |
C24 | C23 | C26 | 120.5° | 120.0° |
C23 | C24 | H18 | 119.9° | 120.0° |
C23 | C26 | H20 | 109.5° | 109.5° |
C23 | C26 | H21 | 109.5° | 109.4° |
C23 | C26 | H22 | 109.4° | 109.4° |
H3 | C8 | H4 | 109.5° | 109.4° |
H8 | C17 | H9 | 109.4° | 109.2° |
H10 | C18 | H11 | 109.5° | 109.7° |
H12 | C19 | H13 | 109.5° | 109.6° |
H14 | C20 | H15 | 109.4° | 109.2° |
H20 | C26 | H21 | 109.4° | 109.5° |
H20 | C26 | H22 | 109.4° | 109.5° |
H21 | C26 | H22 | 109.5° | 109.5° |
H23 | C27 | H24 | 109.4° | 109.4° |
H23 | C27 | H25 | 109.5° | 109.5° |
H24 | C27 | H25 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O7 | C5 | O10 | C1 | 179.7° | 179.9° |
O7 | C5 | C1 | C27 | 119.5° | 127.0° |
O7 | C5 | C1 | C2 | 115.1° | 7.0° |
O7 | C5 | C1 | H1 | 1.7° | 113.0° |
O7 | C5 | O10 | H27 | 0.0° | 0.1° |
O10 | C5 | C1 | C27 | 60.7° | 53.0° |
O10 | C5 | C1 | C2 | 64.7° | 173.0° |
O10 | C5 | C1 | H1 | 178.6° | 67.0° |
C5 | C1 | C27 | C2 | 119.5° | 120.0° |
C5 | C1 | C27 | H1 | 117.8° | 120.0° |
C5 | C1 | C2 | H1 | 116.9° | 120.0° |
C5 | C1 | C2 | N4 | 52.8° | 174.0° |
C5 | C1 | C2 | C6 | 178.5° | 66.0° |
C5 | C1 | C2 | H2 | 64.8° | 54.1° |
C5 | C1 | C27 | H23 | 180.0° | 60.0° |
C5 | C1 | C27 | H24 | 60.0° | 59.9° |
C5 | C1 | C27 | H25 | 60.0° | 180.0° |
C1 | C5 | O10 | H27 | 179.7° | 180.0° |
C27 | C1 | C2 | H1 | 122.8° | 120.0° |
C27 | C1 | C2 | N4 | 173.1° | 65.9° |
C27 | C1 | C2 | C6 | 61.2° | 54.1° |
C27 | C1 | C2 | H2 | 55.5° | 174.1° |
C1 | C27 | H23 | H24 | 120.0° | 119.9° |
C1 | C27 | H23 | H25 | 120.0° | 120.1° |
C1 | C27 | H24 | H25 | 120.0° | 120.1° |
C1 | C2 | N4 | C3 | 174.1° | 85.0° |
C1 | C2 | N4 | C6 | 125.6° | 119.9° |
C1 | C2 | N4 | H2 | 116.9° | 120.0° |
C1 | C2 | C6 | H2 | 116.6° | 120.0° |
C1 | C2 | C6 | C21 | 85.7° | 101.0° |
C1 | C2 | C6 | C25 | 94.8° | 78.8° |
C2 | C1 | C27 | H23 | 60.5° | 60.0° |
C2 | C1 | C27 | H24 | 59.5° | 179.9° |
C2 | C1 | C27 | H25 | 179.5° | 60.0° |
C1 | C2 | N4 | H26 | 5.9° | 95.0° |
C3 | C8 | C9 | H3 | 120.4° | 120.0° |
C3 | C8 | C9 | H4 | 120.4° | 120.0° |
C8 | C3 | N4 | O14 | 178.5° | 180.0° |
C8 | C3 | N4 | C2 | 170.8° | 180.0° |
C3 | C8 | C9 | C12 | 136.1° | 89.7° |
C3 | C8 | C9 | C13 | 43.1° | 90.0° |
C3 | C8 | H3 | H4 | 118.7° | 120.0° |
C8 | C3 | N4 | H26 | 9.2° | 0.0° |
C9 | C8 | C3 | N4 | 92.3° | 180.0° |
C9 | C8 | C3 | O14 | 86.2° | 0.0° |
C8 | C9 | C12 | C13 | 179.2° | 179.8° |
C8 | C9 | C12 | C15 | 179.9° | 180.0° |
C8 | C9 | C13 | C11 | 179.8° | 179.9° |
C9 | C8 | H3 | H4 | 118.8° | 120.0° |
C8 | C9 | C12 | H6 | 0.1° | 0.0° |
C8 | C9 | C13 | H7 | 0.2° | 0.2° |
C3 | N4 | C2 | H26 | 180.0° | 179.9° |
C3 | N4 | C2 | C6 | 60.3° | 155.0° |
C3 | N4 | C2 | H2 | 57.2° | 34.9° |
N4 | C3 | C8 | H3 | 28.1° | 60.0° |
N4 | C3 | C8 | H4 | 147.3° | 60.0° |
C2 | N4 | C3 | O14 | 7.6° | 0.0° |
N4 | C2 | C6 | H2 | 118.0° | 120.1° |
N4 | C2 | C6 | C21 | 39.7° | 139.1° |
N4 | C2 | C6 | C25 | 139.8° | 41.1° |
N4 | C2 | C1 | H1 | 64.1° | 54.1° |
O14 | C3 | C8 | H3 | 153.4° | 120.0° |
O14 | C3 | C8 | H4 | 34.2° | 120.0° |
O14 | C3 | N4 | H26 | 172.4° | 180.0° |
C9 | C12 | C15 | H6 | 180.0° | 180.0° |
C9 | C12 | C15 | C20 | 179.6° | 179.4° |
C9 | C12 | C15 | C16 | 0.5° | 0.3° |
C12 | C9 | C13 | C11 | 0.6° | 0.1° |
C12 | C9 | C8 | H3 | 15.8° | 150.2° |
C12 | C9 | C8 | H4 | 103.5° | 30.3° |
C12 | C9 | C13 | H7 | 179.4° | 179.9° |
C12 | C15 | C20 | C16 | 179.9° | 179.6° |
C12 | C15 | C20 | C19 | 163.6° | 162.3° |
C15 | C12 | C9 | C13 | 0.7° | 0.3° |
C12 | C15 | C16 | C11 | 0.1° | 0.1° |
C12 | C15 | C16 | C17 | 179.9° | 179.2° |
C12 | C15 | C20 | H14 | 75.8° | 77.4° |
C12 | C15 | C20 | H15 | 43.1° | 42.0° |
C2 | C6 | C21 | C25 | 179.5° | 179.8° |
C2 | C6 | C21 | C22 | 179.8° | 180.0° |
C2 | C6 | C25 | C24 | 179.8° | 179.8° |
C6 | C2 | C1 | H1 | 61.6° | 174.0° |
C2 | C6 | C21 | H16 | 0.2° | 0.1° |
C2 | C6 | C25 | H19 | 0.2° | 0.1° |
C6 | C2 | N4 | H26 | 119.7° | 24.9° |
C15 | C20 | C19 | H14 | 120.5° | 120.3° |
C15 | C20 | C19 | H15 | 120.6° | 120.3° |
C15 | C20 | C19 | C18 | 47.2° | 51.1° |
C20 | C15 | C16 | C11 | 180.0° | 179.5° |
C20 | C15 | C16 | C17 | 0.0° | 1.2° |
C20 | C15 | C12 | H6 | 0.4° | 0.6° |
C15 | C20 | C19 | H12 | 167.3° | 68.6° |
C15 | C20 | C19 | H13 | 72.9° | 170.9° |
C15 | C20 | H14 | H15 | 118.3° | 119.4° |
C19 | C20 | C15 | C16 | 16.4° | 18.0° |
C20 | C19 | C18 | H12 | 120.1° | 119.7° |
C20 | C19 | C18 | H13 | 120.1° | 119.8° |
C20 | C19 | C18 | C17 | 62.7° | 69.8° |
C20 | C19 | C18 | H10 | 57.5° | 170.5° |
C20 | C19 | C18 | H11 | 177.2° | 49.9° |
C20 | C19 | H12 | H13 | 119.6° | 120.6° |
C19 | C20 | H14 | H15 | 118.3° | 119.4° |
C9 | C13 | C11 | H7 | 180.0° | 180.0° |
C9 | C13 | C11 | C16 | 0.2° | 0.1° |
C13 | C9 | C8 | H3 | 163.5° | 30.0° |
C13 | C9 | C8 | H4 | 77.3° | 149.9° |
C9 | C13 | C11 | H5 | 179.7° | 180.0° |
C13 | C9 | C12 | H6 | 179.3° | 179.8° |
C15 | C16 | C11 | C13 | 0.0° | 0.0° |
C15 | C16 | C11 | C17 | 180.0° | 179.4° |
C15 | C16 | C17 | C18 | 15.0° | 18.1° |
C15 | C16 | C11 | H5 | 180.0° | 180.0° |
C16 | C15 | C12 | H6 | 179.5° | 179.8° |
C15 | C16 | C17 | H8 | 105.6° | 102.2° |
C15 | C16 | C17 | H9 | 135.6° | 138.4° |
C16 | C15 | C20 | H14 | 104.1° | 102.3° |
C16 | C15 | C20 | H15 | 137.0° | 138.3° |
C19 | C18 | C17 | C16 | 45.8° | 51.1° |
C19 | C18 | C17 | H10 | 120.2° | 119.8° |
C19 | C18 | C17 | H11 | 120.2° | 119.7° |
C19 | C18 | C17 | H8 | 74.8° | 69.2° |
C19 | C18 | C17 | H9 | 166.4° | 171.4° |
C19 | C18 | H10 | H11 | 119.5° | 120.6° |
C18 | C19 | H12 | H13 | 119.6° | 120.5° |
C18 | C19 | C20 | H14 | 73.4° | 69.2° |
C18 | C19 | C20 | H15 | 167.7° | 171.4° |
C6 | C21 | C22 | H16 | 180.0° | 180.0° |
C21 | C6 | C25 | C24 | 0.3° | 0.4° |
C6 | C21 | C22 | C23 | 0.1° | 0.0° |
C21 | C6 | C2 | H2 | 157.7° | 19.0° |
C6 | C21 | C22 | H17 | 179.9° | 180.0° |
C21 | C6 | C25 | H19 | 179.7° | 179.7° |
C25 | C6 | C21 | C22 | 0.3° | 0.2° |
C6 | C25 | C24 | H19 | 180.0° | 179.9° |
C6 | C25 | C24 | C23 | 0.1° | 0.4° |
C25 | C6 | C2 | H2 | 21.8° | 161.2° |
C25 | C6 | C21 | H16 | 179.7° | 179.8° |
C6 | C25 | C24 | H18 | 179.9° | 179.8° |
C13 | C11 | C16 | H5 | 180.0° | 180.0° |
C13 | C11 | C16 | C17 | 180.0° | 179.4° |
C21 | C22 | C23 | H17 | 180.0° | 180.0° |
C21 | C22 | C23 | C24 | 0.1° | 0.0° |
C21 | C22 | C23 | C26 | 180.0° | 180.0° |
C11 | C16 | C17 | C18 | 165.0° | 162.5° |
C16 | C11 | C13 | H7 | 179.8° | 179.9° |
C11 | C16 | C17 | H8 | 74.4° | 77.1° |
C11 | C16 | C17 | H9 | 44.4° | 42.3° |
C16 | C17 | C18 | H8 | 120.6° | 120.3° |
C16 | C17 | C18 | H9 | 120.6° | 120.3° |
C17 | C16 | C11 | H5 | 0.0° | 0.6° |
C16 | C17 | H8 | H9 | 118.2° | 119.4° |
C16 | C17 | C18 | H10 | 74.3° | 171.0° |
C16 | C17 | C18 | H11 | 166.0° | 68.5° |
C25 | C24 | C23 | C22 | 0.1° | 0.2° |
C25 | C24 | C23 | H18 | 180.0° | 179.8° |
C25 | C24 | C23 | C26 | 180.0° | 179.8° |
C18 | C17 | H8 | H9 | 118.2° | 119.4° |
C17 | C18 | H10 | H11 | 119.5° | 120.5° |
C17 | C18 | C19 | H12 | 177.2° | 50.0° |
C17 | C18 | C19 | H13 | 57.4° | 170.4° |
C22 | C23 | C24 | C26 | 179.9° | 180.0° |
C23 | C22 | C21 | H16 | 179.9° | 180.0° |
C22 | C23 | C24 | H18 | 179.9° | 180.0° |
C22 | C23 | C26 | H20 | 89.9° | 90.0° |
C22 | C23 | C26 | H21 | 150.1° | 150.0° |
C22 | C23 | C26 | H22 | 30.0° | 30.0° |
C24 | C23 | C22 | H17 | 180.0° | 180.0° |
C23 | C24 | C25 | H19 | 179.9° | 179.7° |
C24 | C23 | C26 | H20 | 90.0° | 90.1° |
C24 | C23 | C26 | H21 | 30.0° | 30.0° |
C24 | C23 | C26 | H22 | 150.1° | 149.9° |
C26 | C23 | C22 | H17 | 0.1° | 0.0° |
C26 | C23 | C24 | H18 | 0.0° | 0.0° |
C23 | C26 | H20 | H21 | 120.0° | 120.0° |
C23 | C26 | H20 | H22 | 120.0° | 120.0° |
C23 | C26 | H21 | H22 | 120.0° | 120.0° |
H1 | C1 | C2 | H2 | 178.3° | 65.9° |
H1 | C1 | C27 | H23 | 62.2° | 180.0° |
H1 | C1 | C27 | H24 | 177.8° | 60.1° |
H1 | C1 | C27 | H25 | 57.8° | 60.0° |
H2 | C2 | N4 | H26 | 122.8° | 145.0° |
H5 | C11 | C13 | H7 | 0.2° | 0.0° |
H8 | C17 | C18 | H10 | 165.0° | 50.6° |
H8 | C17 | C18 | H11 | 45.4° | 171.1° |
H9 | C17 | C18 | H10 | 46.3° | 68.8° |
H9 | C17 | C18 | H11 | 73.4° | 51.7° |
H10 | C18 | C19 | H12 | 62.6° | 69.8° |
H10 | C18 | C19 | H13 | 177.6° | 50.6° |
H11 | C18 | C19 | H12 | 57.1° | 169.6° |
H11 | C18 | C19 | H13 | 62.7° | 69.9° |
H12 | C19 | C20 | H14 | 46.7° | 171.1° |
H12 | C19 | C20 | H15 | 72.1° | 51.7° |
H13 | C19 | C20 | H14 | 166.5° | 50.6° |
H13 | C19 | C20 | H15 | 47.6° | 68.8° |
H16 | C21 | C22 | H17 | 0.1° | 0.0° |
H18 | C24 | C25 | H19 | 0.1° | 0.1° |
H20 | C26 | H21 | H22 | 120.0° | 120.0° |
H23 | C27 | H24 | H25 | 120.0° | 120.0° |