SG7
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | O5 | sing | 1.43Å | 1.45Å | |
C1 | C2 | sing | 1.53Å | 1.51Å | |
C1 | O1 | sing | 1.43Å | 1.37Å | |
O5 | C5 | sing | 1.43Å | 1.42Å | |
C2 | C3 | sing | 1.53Å | 1.45Å | |
C2 | O2 | sing | 1.43Å | 1.41Å | |
C3 | C4 | sing | 1.53Å | 1.44Å | |
C3 | O3 | sing | 1.45Å | 1.42Å | |
C4 | C5 | sing | 1.53Å | 1.51Å | |
C4 | O4 | sing | 1.45Å | 1.40Å | |
C5 | C6 | sing | 1.53Å | 1.52Å | |
O3 | C3B | sing | 1.34Å | 1.27Å | |
C3B | C3C | sing | 1.51Å | 1.51Å | |
C3B | O3D | doub | 1.21Å | 1.25Å | |
O4 | C4C | sing | 1.34Å | 1.31Å | |
C4B | C4C | sing | 1.51Å | 1.51Å | |
C4C | O4D | doub | 1.21Å | 1.28Å | |
C6 | O6 | sing | 1.43Å | 1.40Å | |
O6 | S5C | sing | 1.52Å | 1.49Å | |
S5C | O5D | doub | 1.42Å | 1.47Å | |
S5C | O5E | doub | 1.42Å | 1.47Å | |
S5C | N5F | sing | 1.66Å | 1.55Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
C4 | H4 | sing | 1.09Å | 1.10Å | |
C5 | H5 | sing | 1.09Å | 1.10Å | |
O1 | HO1 | sing | 0.97Å | 0.95Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
C3C | H3C | sing | 1.09Å | 1.10Å | |
C3C | H3CA | sing | 1.09Å | 1.10Å | |
C3C | H3CB | sing | 1.09Å | 1.10Å | |
C4B | H4B | sing | 1.09Å | 1.10Å | |
C4B | H4BA | sing | 1.09Å | 1.10Å | |
C4B | H4BB | sing | 1.09Å | 1.10Å | |
C6 | H61 | sing | 1.09Å | 1.10Å | |
C6 | H62 | sing | 1.09Å | 1.10Å | |
N5F | HN5F | sing | 0.97Å | 1.00Å | |
N5F | HN5A | sing | 0.97Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O5 | C1 | C2 | 115.8° | 109.4° |
O5 | C1 | O1 | 109.6° | 109.5° |
C1 | O5 | C5 | 113.0° | 114.1° |
O5 | C1 | H1 | 105.4° | 109.4° |
C2 | C1 | O1 | 110.7° | 109.5° |
C1 | C2 | C3 | 115.2° | 109.2° |
C1 | C2 | O2 | 107.3° | 109.6° |
C2 | C1 | H1 | 104.1° | 109.5° |
C1 | C2 | H2 | 106.8° | 109.6° |
O1 | C1 | H1 | 111.0° | 109.5° |
C1 | O1 | HO1 | 109.5° | 114.0° |
O5 | C5 | C4 | 113.6° | 109.4° |
O5 | C5 | C6 | 97.2° | 109.5° |
O5 | C5 | H5 | 122.9° | 109.5° |
C3 | C2 | O2 | 108.5° | 109.5° |
C2 | C3 | C4 | 113.6° | 109.0° |
C2 | C3 | O3 | 109.2° | 109.6° |
C3 | C2 | H2 | 105.5° | 109.5° |
C2 | C3 | H3 | 105.9° | 109.5° |
O2 | C2 | H2 | 113.7° | 109.6° |
C2 | O2 | HO2 | 109.5° | 114.0° |
C4 | C3 | O3 | 106.5° | 109.5° |
C3 | C4 | C5 | 109.7° | 109.2° |
C3 | C4 | O4 | 110.1° | 109.5° |
C4 | C3 | H3 | 108.7° | 109.5° |
C3 | C4 | H4 | 108.2° | 109.5° |
C3 | O3 | C3B | 119.4° | 117.0° |
O3 | C3 | H3 | 113.1° | 109.7° |
C5 | C4 | O4 | 107.1° | 109.5° |
C4 | C5 | C6 | 126.5° | 109.5° |
C5 | C4 | H4 | 111.1° | 109.5° |
C4 | C5 | H5 | 90.4° | 109.5° |
C4 | O4 | C4C | 125.0° | 117.0° |
O4 | C4 | H4 | 110.7° | 109.6° |
C5 | C6 | O6 | 113.6° | 109.5° |
C6 | C5 | H5 | 108.7° | 109.5° |
C5 | C6 | H61 | 108.1° | 109.5° |
C5 | C6 | H62 | 108.1° | 109.5° |
O3 | C3B | C3C | 120.3° | 120.0° |
O3 | C3B | O3D | 119.0° | 120.0° |
C3C | C3B | O3D | 120.7° | 120.0° |
C3B | C3C | H3C | 109.5° | 109.4° |
C3B | C3C | H3CA | 109.5° | 109.5° |
C3B | C3C | H3CB | 109.5° | 109.5° |
O4 | C4C | C4B | 118.5° | 120.0° |
O4 | C4C | O4D | 120.5° | 120.0° |
C4B | C4C | O4D | 118.7° | 119.9° |
C4C | C4B | H4B | 109.5° | 109.4° |
C4C | C4B | H4BA | 109.5° | 109.5° |
C4C | C4B | H4BB | 109.5° | 109.4° |
C6 | O6 | S5C | 119.9° | 114.0° |
O6 | C6 | H61 | 108.1° | 109.4° |
O6 | C6 | H62 | 108.1° | 109.5° |
O6 | S5C | O5D | 122.4° | 106.4° |
O6 | S5C | O5E | 91.8° | 106.4° |
O6 | S5C | N5F | 117.2° | 107.2° |
O5D | S5C | O5E | 93.3° | 123.1° |
O5D | S5C | N5F | 118.2° | 106.4° |
O5E | S5C | N5F | 100.1° | 106.4° |
S5C | N5F | HN5F | 109.5° | 120.0° |
S5C | N5F | HN5A | 109.5° | 120.1° |
H3C | C3C | H3CA | 109.5° | 109.5° |
H3C | C3C | H3CB | 109.5° | 109.5° |
H3CA | C3C | H3CB | 109.5° | 109.5° |
H4B | C4B | H4BA | 109.4° | 109.5° |
H4B | C4B | H4BB | 109.5° | 109.4° |
H4BA | C4B | H4BB | 109.5° | 109.5° |
H61 | C6 | H62 | 110.8° | 109.5° |
HN5F | N5F | HN5A | 109.5° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O5 | C1 | C2 | O1 | 125.5° | 120.0° |
O5 | C1 | C2 | H1 | 115.1° | 119.9° |
O5 | C1 | O1 | H1 | 116.0° | 120.0° |
O5 | C1 | C2 | C3 | 36.3° | 57.7° |
O5 | C1 | C2 | O2 | 84.7° | 62.3° |
C1 | O5 | C5 | C4 | 52.5° | 61.2° |
C1 | O5 | C5 | C6 | 172.3° | 178.8° |
O5 | C1 | C2 | H2 | 153.0° | 177.5° |
C1 | O5 | C5 | H5 | 54.4° | 58.7° |
O5 | C1 | O1 | HO1 | 180.0° | 60.0° |
C2 | C1 | O1 | H1 | 115.1° | 120.0° |
C2 | C1 | O5 | C5 | 40.8° | 61.2° |
C1 | C2 | C3 | O2 | 120.3° | 119.9° |
C1 | C2 | C3 | H2 | 117.5° | 119.9° |
C1 | C2 | O2 | H2 | 117.8° | 120.2° |
C1 | C2 | C3 | C4 | 43.1° | 57.0° |
C1 | C2 | C3 | O3 | 161.8° | 176.8° |
C1 | C2 | C3 | H3 | 76.1° | 62.8° |
C2 | C1 | O1 | HO1 | 51.1° | 179.9° |
C1 | C2 | O2 | HO2 | 180.0° | 60.0° |
O1 | C1 | O5 | C5 | 85.2° | 58.8° |
O1 | C1 | C2 | C3 | 89.2° | 62.4° |
O1 | C1 | C2 | O2 | 149.8° | 177.7° |
O1 | C1 | C2 | H2 | 27.6° | 57.5° |
O5 | C5 | C4 | C3 | 58.8° | 57.6° |
O5 | C5 | C4 | C6 | 119.6° | 120.0° |
O5 | C5 | C4 | H5 | 126.6° | 120.0° |
O5 | C5 | C4 | O4 | 178.2° | 177.5° |
O5 | C5 | C6 | H5 | 128.4° | 120.1° |
O5 | C5 | C6 | O6 | 99.3° | 65.0° |
C5 | O5 | C1 | H1 | 155.3° | 178.9° |
O5 | C5 | C4 | H4 | 60.8° | 62.3° |
O5 | C5 | C6 | H61 | 20.7° | 175.0° |
O5 | C5 | C6 | H62 | 140.7° | 55.0° |
C3 | C2 | O2 | H2 | 117.1° | 120.1° |
C2 | C3 | C4 | O3 | 120.2° | 119.9° |
C2 | C3 | C4 | H3 | 117.6° | 119.8° |
C2 | C3 | O3 | H3 | 117.7° | 120.2° |
C2 | C3 | C4 | C5 | 52.8° | 57.0° |
C2 | C3 | C4 | O4 | 170.3° | 176.9° |
C2 | C3 | O3 | C3B | 109.9° | 90.0° |
C3 | C2 | C1 | H1 | 151.4° | 177.6° |
C2 | C3 | C4 | H4 | 68.5° | 62.9° |
C3 | C2 | O2 | HO2 | 54.9° | 179.7° |
O2 | C2 | C3 | C4 | 77.1° | 63.0° |
O2 | C2 | C3 | O3 | 41.5° | 56.9° |
O2 | C2 | C1 | H1 | 30.5° | 57.7° |
O2 | C2 | C3 | H3 | 163.6° | 177.2° |
C4 | C3 | O3 | H3 | 119.3° | 120.2° |
C3 | C4 | C5 | O4 | 119.4° | 119.9° |
C3 | C4 | C5 | H4 | 119.6° | 119.9° |
C3 | C4 | O4 | H4 | 119.6° | 120.2° |
C3 | C4 | C5 | C6 | 178.4° | 177.6° |
C4 | C3 | O3 | C3B | 127.1° | 150.5° |
C3 | C4 | O4 | C4C | 109.7° | 150.0° |
C4 | C3 | C2 | H2 | 160.6° | 176.9° |
C3 | C4 | C5 | H5 | 67.8° | 62.3° |
O3 | C3 | C4 | C5 | 173.0° | 176.8° |
O3 | C3 | C4 | O4 | 69.4° | 63.3° |
C3 | O3 | C3B | C3C | 174.8° | 180.0° |
C3 | O3 | C3B | O3D | 3.7° | 0.0° |
O3 | C3 | C2 | H2 | 80.7° | 63.2° |
O3 | C3 | C4 | H4 | 51.7° | 56.9° |
C5 | C4 | O4 | H4 | 121.3° | 120.2° |
C4 | C5 | C6 | H5 | 105.0° | 120.0° |
C5 | C4 | O4 | C4C | 131.2° | 90.3° |
C4 | C5 | C6 | O6 | 27.3° | 175.1° |
C5 | C4 | C3 | H3 | 64.8° | 62.8° |
C4 | C5 | C6 | H61 | 147.3° | 55.1° |
C4 | C5 | C6 | H62 | 92.7° | 64.9° |
O4 | C4 | C5 | C6 | 62.2° | 62.5° |
C4 | O4 | C4C | C4B | 175.7° | 180.0° |
C4 | O4 | C4C | O4D | 13.4° | 0.0° |
O4 | C4 | C3 | H3 | 52.7° | 57.0° |
O4 | C4 | C5 | H5 | 51.6° | 57.6° |
C5 | C6 | O6 | H61 | 120.0° | 120.0° |
C5 | C6 | O6 | H62 | 120.0° | 120.0° |
C5 | C6 | O6 | S5C | 124.7° | 180.0° |
C6 | C5 | C4 | H4 | 58.8° | 57.7° |
C5 | C6 | H61 | H62 | 118.3° | 120.0° |
O3 | C3B | C3C | O3D | 178.4° | 180.0° |
C3B | O3 | C3 | H3 | 7.8° | 30.2° |
O3 | C3B | C3C | H3C | 178.4° | 60.0° |
O3 | C3B | C3C | H3CA | 61.6° | 180.0° |
O3 | C3B | C3C | H3CB | 58.4° | 60.0° |
C3B | C3C | H3C | H3CA | 120.0° | 120.0° |
C3B | C3C | H3C | H3CB | 120.0° | 120.0° |
C3B | C3C | H3CA | H3CB | 120.0° | 120.0° |
O3D | C3B | C3C | H3C | 0.0° | 120.0° |
O3D | C3B | C3C | H3CA | 120.0° | 0.1° |
O3D | C3B | C3C | H3CB | 120.0° | 120.0° |
O4 | C4C | C4B | O4D | 162.6° | 180.0° |
C4C | O4 | C4 | H4 | 9.9° | 29.8° |
O4 | C4C | C4B | H4B | 162.6° | 0.1° |
O4 | C4C | C4B | H4BA | 77.4° | 120.0° |
O4 | C4C | C4B | H4BB | 42.6° | 120.0° |
C4C | C4B | H4B | H4BA | 120.0° | 120.0° |
C4C | C4B | H4B | H4BB | 120.0° | 119.9° |
C4C | C4B | H4BA | H4BB | 120.0° | 120.0° |
O4D | C4C | C4B | H4B | 0.0° | 179.9° |
O4D | C4C | C4B | H4BA | 120.0° | 60.0° |
O4D | C4C | C4B | H4BB | 120.0° | 60.0° |
C6 | O6 | S5C | O5D | 156.7° | 171.5° |
C6 | O6 | S5C | O5E | 108.2° | 38.5° |
C6 | O6 | S5C | N5F | 5.9° | 75.0° |
O6 | C6 | C5 | H5 | 132.3° | 55.0° |
O6 | C6 | H61 | H62 | 118.3° | 120.0° |
O6 | S5C | O5D | O5E | 94.3° | 123.0° |
O6 | S5C | O5D | N5F | 162.4° | 114.1° |
O6 | S5C | O5E | N5F | 118.0° | 114.1° |
S5C | O6 | C6 | H61 | 4.7° | 60.0° |
S5C | O6 | C6 | H62 | 115.3° | 60.0° |
O6 | S5C | N5F | HN5F | 180.0° | 0.0° |
O6 | S5C | N5F | HN5A | 60.0° | 180.0° |
O5D | S5C | O5E | N5F | 119.4° | 122.9° |
O5D | S5C | N5F | HN5F | 16.7° | 113.6° |
O5D | S5C | N5F | HN5A | 103.3° | 66.5° |
O5E | S5C | N5F | HN5F | 82.6° | 113.6° |
O5E | S5C | N5F | HN5A | 157.4° | 66.4° |
S5C | N5F | HN5F | HN5A | 120.0° | 180.0° |
H1 | C1 | C2 | H2 | 91.8° | 62.6° |
H1 | C1 | O1 | HO1 | 64.0° | 60.0° |
H2 | C2 | C3 | H3 | 41.4° | 57.1° |
H2 | C2 | O2 | HO2 | 62.1° | 60.2° |
H3 | C3 | C4 | H4 | 173.8° | 177.2° |
H4 | C4 | C5 | H5 | 172.6° | 177.8° |
H5 | C5 | C6 | H61 | 107.7° | 64.9° |
H5 | C5 | C6 | H62 | 12.3° | 175.0° |
H3C | C3C | H3CA | H3CB | 120.0° | 120.0° |
H4B | C4B | H4BA | H4BB | 120.0° | 120.0° |