SEC
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | CB | sing | 1.53Å | 1.53Å | |
CA | C | sing | 1.51Å | 1.53Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | SE | sing | 1.96Å | 1.88Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
SE | HE | sing | 1.56Å | 1.46Å | |
C | O | doub | 1.21Å | 1.23Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.4° | 111.0° |
N | CA | CB | 110.2° | 109.5° |
N | CA | C | 106.2° | 109.5° |
N | CA | HA | 110.8° | 109.5° |
H | N | H2 | 109.5° | 111.0° |
CB | CA | C | 110.2° | 109.5° |
CB | CA | HA | 109.7° | 109.5° |
CA | CB | SE | 110.4° | 109.5° |
CA | CB | HB2 | 109.2° | 109.5° |
CA | CB | HB3 | 109.2° | 109.5° |
C | CA | HA | 109.8° | 109.4° |
CA | C | O | 120.8° | 120.0° |
CA | C | OXT | 116.3° | 120.0° |
SE | CB | HB2 | 109.2° | 109.4° |
SE | CB | HB3 | 109.3° | 109.5° |
CB | SE | HE | 109.5° | 101.0° |
HB2 | CB | HB3 | 109.5° | 109.5° |
O | C | OXT | 122.6° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | CB | C | 116.8° | 120.0° |
N | CA | CB | HA | 122.2° | 120.0° |
N | CA | C | HA | 119.8° | 120.0° |
N | CA | CB | SE | 171.3° | 65.0° |
N | CA | CB | HB2 | 51.1° | 55.0° |
N | CA | CB | HB3 | 68.6° | 175.0° |
N | CA | C | O | 82.9° | 20.0° |
N | CA | C | OXT | 91.1° | 160.0° |
H | N | CA | CB | 180.0° | 176.0° |
H | N | CA | C | 60.7° | 64.0° |
H | N | CA | HA | 58.4° | 56.0° |
H2 | N | CA | CB | 60.0° | 60.0° |
H2 | N | CA | C | 59.3° | 60.0° |
H2 | N | CA | HA | 178.4° | 180.0° |
CB | CA | C | HA | 121.0° | 120.0° |
CA | CB | SE | HB2 | 120.1° | 120.0° |
CA | CB | SE | HB3 | 120.1° | 120.0° |
CA | CB | HB2 | HB3 | 119.6° | 120.0° |
CA | CB | SE | HE | 180.0° | 180.0° |
CB | CA | C | O | 36.4° | 100.0° |
CB | CA | C | OXT | 149.6° | 80.0° |
C | CA | CB | SE | 71.9° | 175.0° |
C | CA | CB | HB2 | 168.0° | 65.1° |
C | CA | CB | HB3 | 48.2° | 55.0° |
CA | C | O | OXT | 173.6° | 180.0° |
CA | C | OXT | HXT | 173.8° | 180.0° |
HA | CA | CB | SE | 49.1° | 55.0° |
HA | CA | CB | HB2 | 71.1° | 175.0° |
HA | CA | CB | HB3 | 169.2° | 65.0° |
HA | CA | C | O | 157.3° | 140.0° |
HA | CA | C | OXT | 28.6° | 40.0° |
SE | CB | HB2 | HB3 | 119.6° | 120.0° |
HB2 | CB | SE | HE | 59.9° | 60.0° |
HB3 | CB | SE | HE | 59.9° | 60.0° |
O | C | OXT | HXT | 0.0° | 0.0° |