SE9
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C01 | O02 | sing | 1.43Å | 1.40Å | |
O02 | C03 | sing | 1.36Å | 1.40Å | |
C03 | N31 | doub | 1.32Å | 1.32Å | Aromatic |
C03 | C04 | sing | 1.39Å | 1.39Å | Aromatic |
N31 | C30 | sing | 1.32Å | 1.32Å | Aromatic |
C04 | C05 | doub | 1.38Å | 1.38Å | Aromatic |
C30 | C29 | doub | 1.38Å | 1.39Å | Aromatic |
C05 | C29 | sing | 1.39Å | 1.39Å | Aromatic |
C05 | C06 | sing | 1.51Å | 1.53Å | |
C06 | C07 | sing | 1.53Å | 1.53Å | |
F28 | C25 | sing | 1.40Å | 1.37Å | |
C07 | N08 | sing | 1.47Å | 1.45Å | |
C22 | C21 | doub | 1.38Å | 1.39Å | Aromatic |
C22 | C23 | sing | 1.38Å | 1.39Å | Aromatic |
C21 | C20 | sing | 1.38Å | 1.38Å | Aromatic |
F26 | C25 | sing | 1.40Å | 1.37Å | |
N08 | C09 | sing | 1.35Å | 1.45Å | |
C25 | C23 | sing | 1.51Å | 1.53Å | |
C25 | F27 | sing | 1.40Å | 1.37Å | |
C23 | C24 | doub | 1.38Å | 1.38Å | Aromatic |
C20 | C19 | doub | 1.40Å | 1.39Å | Aromatic |
C24 | C19 | sing | 1.40Å | 1.38Å | Aromatic |
C19 | C17 | sing | 1.48Å | 1.52Å | |
N18 | C17 | doub | 1.31Å | 1.48Å | |
N18 | C11 | sing | 1.34Å | 1.45Å | |
C09 | O10 | doub | 1.22Å | 1.19Å | |
C09 | C11 | sing | 1.48Å | 1.53Å | |
C17 | N16 | sing | 1.36Å | 1.48Å | |
C11 | C12 | doub | 1.39Å | 1.49Å | |
N16 | C14 | sing | 1.35Å | 1.45Å | |
C12 | C14 | sing | 1.47Å | 1.49Å | |
C12 | O13 | sing | 1.36Å | 1.40Å | |
C14 | O15 | doub | 1.22Å | 1.18Å | |
C01 | H1 | sing | 1.09Å | 1.10Å | |
C01 | H2 | sing | 1.09Å | 1.10Å | |
C01 | H3 | sing | 1.09Å | 1.10Å | |
C04 | H4 | sing | 1.08Å | 1.08Å | |
C06 | H5 | sing | 1.09Å | 1.10Å | |
C06 | H6 | sing | 1.09Å | 1.10Å | |
C07 | H7 | sing | 1.09Å | 1.10Å | |
C07 | H8 | sing | 1.09Å | 1.10Å | |
C20 | H9 | sing | 1.08Å | 1.08Å | |
C21 | H10 | sing | 1.08Å | 1.08Å | |
C22 | H11 | sing | 1.08Å | 1.08Å | |
C24 | H12 | sing | 1.08Å | 1.08Å | |
C29 | H13 | sing | 1.08Å | 1.08Å | |
C30 | H14 | sing | 1.08Å | 1.08Å | |
N08 | H15 | sing | 0.97Å | 1.00Å | |
N16 | H16 | sing | 0.97Å | 1.00Å | |
O13 | H17 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C01 | O02 | C03 | 114.2° | 117.0° |
O02 | C01 | H1 | 109.5° | 109.4° |
O02 | C01 | H2 | 109.5° | 109.5° |
O02 | C01 | H3 | 109.5° | 109.5° |
O02 | C03 | N31 | 119.8° | 119.7° |
O02 | C03 | C04 | 119.6° | 119.6° |
N31 | C03 | C04 | 120.6° | 120.6° |
C03 | N31 | C30 | 120.9° | 121.6° |
C03 | C04 | C05 | 120.4° | 119.1° |
C03 | C04 | H4 | 119.8° | 120.4° |
N31 | C30 | C29 | 121.2° | 120.9° |
N31 | C30 | H14 | 119.4° | 119.5° |
C04 | C05 | C29 | 117.1° | 118.5° |
C04 | C05 | C06 | 121.1° | 120.7° |
C05 | C04 | H4 | 119.8° | 120.5° |
C30 | C29 | C05 | 119.8° | 119.3° |
C30 | C29 | H13 | 120.1° | 120.3° |
C29 | C30 | H14 | 119.4° | 119.6° |
C29 | C05 | C06 | 121.8° | 120.8° |
C05 | C29 | H13 | 120.1° | 120.4° |
C05 | C06 | C07 | 111.1° | 109.5° |
C05 | C06 | H5 | 109.1° | 109.5° |
C05 | C06 | H6 | 109.1° | 109.5° |
C06 | C07 | N08 | 108.2° | 109.5° |
C07 | C06 | H5 | 109.1° | 109.5° |
C07 | C06 | H6 | 109.1° | 109.4° |
C06 | C07 | H7 | 109.8° | 109.5° |
C06 | C07 | H8 | 109.8° | 109.5° |
F28 | C25 | F26 | 109.7° | 109.5° |
F28 | C25 | C23 | 109.4° | 109.5° |
F28 | C25 | F27 | 109.3° | 109.5° |
C07 | N08 | C09 | 122.8° | 120.0° |
N08 | C07 | H7 | 109.8° | 109.5° |
N08 | C07 | H8 | 109.8° | 109.5° |
C07 | N08 | H15 | 118.6° | 120.0° |
C21 | C22 | C23 | 120.0° | 120.3° |
C22 | C21 | C20 | 120.1° | 120.2° |
C22 | C21 | H10 | 119.9° | 119.9° |
C21 | C22 | H11 | 120.0° | 119.9° |
C22 | C23 | C25 | 120.7° | 120.0° |
C22 | C23 | C24 | 119.9° | 120.2° |
C23 | C22 | H11 | 120.0° | 119.8° |
C21 | C20 | C19 | 119.7° | 119.8° |
C21 | C20 | H9 | 120.1° | 120.1° |
C20 | C21 | H10 | 120.0° | 119.9° |
F26 | C25 | C23 | 109.7° | 109.5° |
F26 | C25 | F27 | 109.5° | 109.5° |
N08 | C09 | O10 | 121.2° | 120.0° |
N08 | C09 | C11 | 117.2° | 120.0° |
C09 | N08 | H15 | 118.6° | 120.0° |
C23 | C25 | F27 | 109.2° | 109.4° |
C25 | C23 | C24 | 119.4° | 119.9° |
C23 | C24 | C19 | 120.0° | 119.8° |
C23 | C24 | H12 | 120.0° | 120.1° |
C20 | C19 | C24 | 120.3° | 119.8° |
C20 | C19 | C17 | 120.7° | 120.1° |
C19 | C20 | H9 | 120.2° | 120.1° |
C24 | C19 | C17 | 119.1° | 120.1° |
C19 | C24 | H12 | 120.0° | 120.1° |
C19 | C17 | N18 | 119.3° | 118.9° |
C19 | C17 | N16 | 120.5° | 118.8° |
C17 | N18 | C11 | 120.4° | 122.1° |
N18 | C17 | N16 | 120.2° | 122.3° |
N18 | C11 | C09 | 118.1° | 120.2° |
N18 | C11 | C12 | 119.9° | 119.6° |
O10 | C09 | C11 | 121.6° | 120.0° |
C09 | C11 | C12 | 122.0° | 120.2° |
C17 | N16 | C14 | 119.7° | 120.0° |
C17 | N16 | H16 | 120.2° | 120.0° |
C11 | C12 | C14 | 119.4° | 117.9° |
C11 | C12 | O13 | 120.3° | 121.0° |
N16 | C14 | C12 | 120.4° | 118.0° |
N16 | C14 | O15 | 119.2° | 121.0° |
C14 | N16 | H16 | 120.1° | 120.0° |
C14 | C12 | O13 | 120.3° | 121.0° |
C12 | C14 | O15 | 120.4° | 121.0° |
C12 | O13 | H17 | 109.5° | 114.0° |
H1 | C01 | H2 | 109.5° | 109.5° |
H1 | C01 | H3 | 109.5° | 109.5° |
H2 | C01 | H3 | 109.4° | 109.5° |
H5 | C06 | H6 | 109.4° | 109.4° |
H7 | C07 | H8 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C01 | O02 | C03 | N31 | 36.5° | 0.0° |
C01 | O02 | C03 | C04 | 143.5° | 179.7° |
O02 | C01 | H1 | H2 | 120.0° | 120.0° |
O02 | C01 | H1 | H3 | 120.0° | 119.9° |
O02 | C01 | H2 | H3 | 120.0° | 120.0° |
O02 | C03 | N31 | C04 | 180.0° | 179.7° |
O02 | C03 | N31 | C30 | 180.0° | 179.7° |
O02 | C03 | C04 | C05 | 179.9° | 179.7° |
C03 | O02 | C01 | H1 | 180.0° | 60.0° |
C03 | O02 | C01 | H2 | 60.0° | 60.0° |
C03 | O02 | C01 | H3 | 60.0° | 179.9° |
O02 | C03 | C04 | H4 | 0.1° | 0.4° |
N31 | C03 | C04 | C05 | 0.1° | 0.0° |
C03 | N31 | C30 | C29 | 0.0° | 0.0° |
N31 | C03 | C04 | H4 | 179.9° | 180.0° |
C03 | N31 | C30 | H14 | 180.0° | 180.0° |
C04 | C03 | N31 | C30 | 0.0° | 0.0° |
C03 | C04 | C05 | H4 | 180.0° | 179.9° |
C03 | C04 | C05 | C29 | 0.2° | 0.0° |
C03 | C04 | C05 | C06 | 179.9° | 180.0° |
N31 | C30 | C29 | H14 | 180.0° | 179.9° |
N31 | C30 | C29 | C05 | 0.1° | 0.1° |
N31 | C30 | C29 | H13 | 179.9° | 179.9° |
C04 | C05 | C29 | C30 | 0.2° | 0.0° |
C04 | C05 | C29 | C06 | 179.8° | 180.0° |
C04 | C05 | C06 | C07 | 48.5° | 90.0° |
C04 | C05 | C06 | H5 | 168.8° | 149.9° |
C04 | C05 | C06 | H6 | 71.8° | 30.0° |
C04 | C05 | C29 | H13 | 179.9° | 179.9° |
C30 | C29 | C05 | H13 | 180.0° | 180.0° |
C30 | C29 | C05 | C06 | 179.9° | 180.0° |
C29 | C05 | C06 | C07 | 131.2° | 90.0° |
C29 | C05 | C04 | H4 | 179.8° | 179.9° |
C29 | C05 | C06 | H5 | 11.0° | 30.1° |
C29 | C05 | C06 | H6 | 108.5° | 150.0° |
C05 | C29 | C30 | H14 | 179.9° | 180.0° |
C05 | C06 | C07 | H5 | 120.2° | 120.1° |
C05 | C06 | C07 | H6 | 120.3° | 120.0° |
C05 | C06 | C07 | N08 | 56.4° | 180.0° |
C06 | C05 | C04 | H4 | 0.0° | 0.1° |
C05 | C06 | H5 | H6 | 119.2° | 120.0° |
C05 | C06 | C07 | H7 | 176.2° | 60.0° |
C05 | C06 | C07 | H8 | 63.4° | 60.0° |
C06 | C05 | C29 | H13 | 0.1° | 0.1° |
C06 | C07 | N08 | H7 | 119.8° | 120.0° |
C06 | C07 | N08 | H8 | 119.8° | 120.0° |
C06 | C07 | N08 | C09 | 159.5° | 180.0° |
C07 | C06 | H5 | H6 | 119.3° | 119.9° |
C06 | C07 | H7 | H8 | 120.6° | 120.0° |
C06 | C07 | N08 | H15 | 20.5° | 0.0° |
F28 | C25 | C23 | C22 | 103.7° | 120.0° |
F28 | C25 | F26 | C23 | 120.2° | 120.0° |
F28 | C25 | F26 | F27 | 120.0° | 120.0° |
F28 | C25 | C23 | F27 | 119.6° | 120.0° |
F28 | C25 | C23 | C24 | 76.3° | 59.7° |
C07 | N08 | C09 | H15 | 180.0° | 180.0° |
C07 | N08 | C09 | O10 | 0.5° | 0.0° |
C07 | N08 | C09 | C11 | 179.8° | 180.0° |
N08 | C07 | C06 | H5 | 63.8° | 59.9° |
N08 | C07 | C06 | H6 | 176.7° | 60.0° |
N08 | C07 | H7 | H8 | 120.6° | 120.0° |
C21 | C22 | C23 | H11 | 180.0° | 179.9° |
C22 | C21 | C20 | H10 | 180.0° | 180.0° |
C21 | C22 | C23 | C25 | 180.0° | 180.0° |
C21 | C22 | C23 | C24 | 0.0° | 0.3° |
C22 | C21 | C20 | C19 | 0.2° | 0.0° |
C22 | C21 | C20 | H9 | 179.8° | 180.0° |
C23 | C22 | C21 | C20 | 0.1° | 0.0° |
C22 | C23 | C25 | F26 | 16.7° | 120.0° |
C22 | C23 | C25 | C24 | 180.0° | 179.7° |
C22 | C23 | C25 | F27 | 136.7° | 0.0° |
C22 | C23 | C24 | C19 | 0.1° | 0.5° |
C23 | C22 | C21 | H10 | 180.0° | 180.0° |
C22 | C23 | C24 | H12 | 179.9° | 180.0° |
C21 | C20 | C19 | H9 | 180.0° | 180.0° |
C21 | C20 | C19 | C24 | 0.3° | 0.2° |
C21 | C20 | C19 | C17 | 179.9° | 180.0° |
C20 | C21 | C22 | H11 | 180.0° | 180.0° |
F26 | C25 | C23 | F27 | 120.1° | 120.0° |
F26 | C25 | C23 | C24 | 163.3° | 60.3° |
N08 | C09 | C11 | N18 | 6.7° | 0.3° |
N08 | C09 | O10 | C11 | 179.7° | 180.0° |
N08 | C09 | C11 | C12 | 173.1° | 180.0° |
C09 | N08 | C07 | H7 | 39.7° | 60.0° |
C09 | N08 | C07 | H8 | 80.7° | 60.0° |
C25 | C23 | C24 | C19 | 179.9° | 179.8° |
C25 | C23 | C22 | H11 | 0.0° | 0.1° |
C25 | C23 | C24 | H12 | 0.1° | 0.3° |
F27 | C25 | C23 | C24 | 43.3° | 179.7° |
C23 | C24 | C19 | C20 | 0.3° | 0.5° |
C23 | C24 | C19 | H12 | 180.0° | 179.5° |
C23 | C24 | C19 | C17 | 179.8° | 179.8° |
C24 | C23 | C22 | H11 | 180.0° | 179.7° |
C20 | C19 | C24 | C17 | 179.6° | 179.8° |
C20 | C19 | C17 | N18 | 126.5° | 179.6° |
C20 | C19 | C17 | N16 | 54.1° | 0.0° |
C19 | C20 | C21 | H10 | 179.8° | 179.9° |
C20 | C19 | C24 | H12 | 179.7° | 179.9° |
C24 | C19 | C17 | N18 | 53.1° | 0.6° |
C24 | C19 | C17 | N16 | 126.4° | 179.8° |
C24 | C19 | C20 | H9 | 179.7° | 179.8° |
C19 | C17 | N18 | N16 | 179.4° | 179.6° |
C19 | C17 | N18 | C11 | 179.9° | 179.7° |
C19 | C17 | N16 | C14 | 179.9° | 180.0° |
C17 | C19 | C20 | H9 | 0.1° | 0.0° |
C17 | C19 | C24 | H12 | 0.2° | 0.3° |
C19 | C17 | N16 | H16 | 0.1° | 0.4° |
C17 | N18 | C11 | C09 | 179.9° | 179.7° |
C17 | N18 | C11 | C12 | 0.3° | 0.7° |
N18 | C17 | N16 | C14 | 0.4° | 0.4° |
N18 | C17 | N16 | H16 | 179.5° | 180.0° |
N18 | C11 | C09 | O10 | 173.0° | 179.6° |
N18 | C11 | C09 | C12 | 179.8° | 179.7° |
C11 | N18 | C17 | N16 | 0.5° | 0.7° |
N18 | C11 | C12 | C14 | 0.1° | 0.3° |
N18 | C11 | C12 | O13 | 179.9° | 179.7° |
O10 | C09 | C11 | C12 | 7.2° | 0.0° |
O10 | C09 | N08 | H15 | 179.5° | 180.0° |
C09 | C11 | C12 | C14 | 179.9° | 180.0° |
C09 | C11 | C12 | O13 | 0.1° | 0.0° |
C11 | C09 | N08 | H15 | 0.2° | 0.0° |
C17 | N16 | C14 | H16 | 180.0° | 179.6° |
C17 | N16 | C14 | C12 | 0.2° | 0.1° |
C17 | N16 | C14 | O15 | 179.6° | 180.0° |
C11 | C12 | C14 | N16 | 0.0° | 0.0° |
C11 | C12 | C14 | O13 | 180.0° | 180.0° |
C11 | C12 | C14 | O15 | 179.8° | 180.0° |
C11 | C12 | O13 | H17 | 2.5° | 180.0° |
N16 | C14 | C12 | O15 | 179.9° | 179.9° |
N16 | C14 | C12 | O13 | 180.0° | 180.0° |
C12 | C14 | N16 | H16 | 179.8° | 179.7° |
C14 | C12 | O13 | H17 | 177.5° | 0.0° |
O13 | C12 | C14 | O15 | 0.2° | 0.0° |
O15 | C14 | N16 | H16 | 0.4° | 0.4° |
H1 | C01 | H2 | H3 | 120.0° | 120.0° |
H5 | C06 | C07 | H7 | 55.9° | 179.9° |
H5 | C06 | C07 | H8 | 176.3° | 60.0° |
H6 | C06 | C07 | H7 | 63.6° | 60.0° |
H6 | C06 | C07 | H8 | 56.8° | 180.0° |
H7 | C07 | N08 | H15 | 140.3° | 120.0° |
H8 | C07 | N08 | H15 | 99.3° | 120.0° |
H9 | C20 | C21 | H10 | 0.2° | 0.0° |
H10 | C21 | C22 | H11 | 0.0° | 0.1° |
H13 | C29 | C30 | H14 | 0.0° | 0.0° |