SE7
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.45Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | C | sing | 1.51Å | 1.53Å | |
CA | CB | sing | 1.53Å | 1.55Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C | O | doub | 1.21Å | 1.24Å | |
C | OXT | sing | 1.34Å | 1.34Å | |
CB | SEG | sing | 1.96Å | 1.89Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
SEG | OD1 | doub | 1.55Å | 1.69Å | |
SEG | OD2 | sing | 1.81Å | 1.70Å | |
OD2 | HD2 | sing | 0.97Å | 0.95Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | C | 111.6° | 109.5° |
N | CA | CB | 111.2° | 109.5° |
N | CA | HA | 109.7° | 109.5° |
H | N | H2 | 109.4° | 111.0° |
C | CA | CB | 107.4° | 109.5° |
C | CA | HA | 108.6° | 109.5° |
CA | C | O | 118.7° | 120.0° |
CA | C | OXT | 117.7° | 120.0° |
CB | CA | HA | 108.3° | 109.4° |
CA | CB | SEG | 120.7° | 109.5° |
CA | CB | HB2 | 106.6° | 109.5° |
CA | CB | HB3 | 106.6° | 109.5° |
O | C | OXT | 123.4° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
SEG | CB | HB2 | 106.6° | 109.5° |
SEG | CB | HB3 | 106.6° | 109.5° |
CB | SEG | OD1 | 109.7° | 101.0° |
CB | SEG | OD2 | 102.8° | 101.0° |
HB2 | CB | HB3 | 109.5° | 109.5° |
OD1 | SEG | OD2 | 108.4° | 101.0° |
SEG | OD2 | HD2 | 109.5° | 114.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | C | CB | 122.1° | 120.0° |
N | CA | C | HA | 121.0° | 120.0° |
N | CA | CB | HA | 120.5° | 120.0° |
N | CA | C | O | 165.6° | 20.0° |
N | CA | C | OXT | 19.5° | 160.0° |
N | CA | CB | SEG | 41.6° | 65.0° |
N | CA | CB | HB2 | 80.0° | 55.0° |
N | CA | CB | HB3 | 163.2° | 175.0° |
H | N | CA | C | 180.0° | 60.0° |
H | N | CA | CB | 60.1° | 60.0° |
H | N | CA | HA | 59.6° | 180.0° |
H2 | N | CA | C | 60.0° | 176.0° |
H2 | N | CA | CB | 179.9° | 64.0° |
H2 | N | CA | HA | 60.4° | 56.0° |
C | CA | CB | HA | 117.1° | 120.0° |
CA | C | O | OXT | 174.6° | 180.0° |
C | CA | CB | SEG | 164.0° | 175.0° |
C | CA | CB | HB2 | 42.4° | 65.1° |
C | CA | CB | HB3 | 74.4° | 55.0° |
CA | C | OXT | HXT | 174.6° | 180.0° |
CB | CA | C | O | 72.3° | 100.0° |
CB | CA | C | OXT | 102.6° | 80.0° |
CA | CB | SEG | HB2 | 121.6° | 120.0° |
CA | CB | SEG | HB3 | 121.6° | 120.0° |
CA | CB | HB2 | HB3 | 115.0° | 120.0° |
CA | CB | SEG | OD1 | 178.6° | 76.4° |
CA | CB | SEG | OD2 | 63.4° | 180.0° |
HA | CA | C | O | 44.6° | 140.0° |
HA | CA | C | OXT | 140.5° | 40.0° |
HA | CA | CB | SEG | 78.9° | 55.0° |
HA | CA | CB | HB2 | 159.5° | 175.0° |
HA | CA | CB | HB3 | 42.6° | 65.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
SEG | CB | HB2 | HB3 | 114.9° | 120.0° |
CB | SEG | OD1 | OD2 | 111.5° | 103.6° |
CB | SEG | OD2 | HD2 | 116.1° | 180.0° |
HB2 | CB | SEG | OD1 | 57.0° | 163.7° |
HB2 | CB | SEG | OD2 | 58.2° | 60.0° |
HB3 | CB | SEG | OD1 | 59.8° | 43.6° |
HB3 | CB | SEG | OD2 | 175.0° | 60.0° |
OD1 | SEG | OD2 | HD2 | 0.0° | 76.3° |