Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

SDU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C1sing1.38Å1.33Å
C1N2doub1.33Å1.36ÅAromatic
N2C2sing1.32Å1.34ÅAromatic
C2N3doub1.32Å1.32ÅAromatic
N3C3sing1.33Å1.34ÅAromatic
C3C4doub1.41Å1.38ÅAromatic
C4N4sing1.35Å1.38ÅAromatic
N4C5doub1.30Å1.32ÅAromatic
C5N5sing1.36Å1.39ÅAromatic
N5C6sing1.46Å1.43Å
C6O1sing1.44Å1.41Å
O1C7sing1.44Å1.46Å
C7C8sing1.53Å1.54Å
C8N6sing1.47Å1.49Å
N6C9sing1.47Å1.52Å
C9C10sing1.53Å1.45Å
C10C11sing1.53Å1.55Å
C11N7sing1.47Å1.51Å
C11C12sing1.51Å1.52Å
C12O2doub1.21Å1.24Å
C12O3sing1.34Å1.26Å
N6C13sing1.47Å1.37Å
C13C14sing1.55Å1.51Å
C14C15sing1.55Å1.51Å
C15N8sing1.49Å1.46Å
N8C16sing1.48Å1.45Å
C7C17sing1.54Å1.54Å
C17O4sing1.43Å1.42Å
C17C18sing1.54Å1.53Å
C18O5sing1.43Å1.41Å
C1C4sing1.41Å1.40ÅAromatic
C6C18sing1.54Å1.53Å
C3N5sing1.37Å1.38ÅAromatic
C13C16sing1.54Å1.51Å
C17H25sing1.09Å1.10Å
C16H24sing1.09Å1.10Å
C16H23sing1.09Å1.10Å
C13H17sing1.09Å1.10Å
C15H20sing1.09Å1.10Å
C15H21sing1.09Å1.10Å
C14H19sing1.09Å1.10Å
C14H18sing1.09Å1.10Å
C5H4sing1.08Å1.08Å
C6H5sing1.09Å1.10Å
C7H6sing1.09Å1.10Å
C2H3sing1.08Å1.08Å
C18H27sing1.09Å1.10Å
N1H2sing0.97Å1.00Å
N1H1sing0.97Å1.00Å
C8H7sing1.09Å1.10Å
C8H8sing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C9H10sing1.09Å1.10Å
C10H11sing1.09Å1.10Å
C10H12sing1.09Å1.10Å
C11H13sing1.09Å1.10Å
N7H16sing1.01Å1.00Å
N7H14sing1.01Å1.00Å
O3H30sing0.97Å0.95Å
N8H22sing1.01Å1.00Å
O4H26sing0.97Å0.95Å
O5H28sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N1C1N2119.4°120.7°
N1C1C4123.8°120.8°
C1N1H2109.5°120.0°
C1N1H1109.5°120.0°
C1N2C2119.1°121.2°
N2C1C4116.9°118.5°
N2C2N3128.9°122.5°
N2C2H3115.5°118.7°
C2N3C3110.6°120.6°
N3C2H3115.5°118.8°
N3C3C4127.1°119.1°
N3C3N5126.6°134.9°
C3C4N4110.2°107.1°
C3C4C1117.2°118.2°
C4C3N5106.0°106.0°
C4N4C5105.7°109.5°
N4C4C1132.6°134.7°
N4C5N5111.8°110.0°
N4C5H4124.1°125.1°
C5N5C6128.0°126.3°
C5N5C3106.3°107.4°
N5C5H4124.1°124.9°
N5C6O1108.3°110.4°
N5C6C18113.9°110.4°
C6N5C3125.4°126.3°
N5C6H5110.0°110.4°
C6O1C7107.7°105.3°
O1C6C18105.5°104.8°
O1C6H5110.3°110.4°
O1C7C8109.3°110.4°
O1C7C17106.7°104.8°
O1C7H6109.0°110.5°
C7C8N6116.3°109.5°
C8C7C17115.9°110.4°
C8C7H6107.9°110.3°
C7C8H7107.7°109.4°
C7C8H8107.7°109.4°
C8N6C9104.8°111.0°
C8N6C13120.2°111.0°
N6C8H7107.7°109.5°
N6C8H8107.8°109.5°
N6C9C10117.5°109.5°
C9N6C13104.9°111.0°
N6C9H9107.4°109.4°
N6C9H10107.4°109.5°
C9C10C11117.6°109.5°
C10C9H9107.4°109.4°
C10C9H10107.4°109.5°
C9C10H11107.4°109.4°
C9C10H12107.4°109.4°
C10C11N7115.8°109.5°
C10C11C12115.2°109.5°
C11C10H11107.4°109.5°
C11C10H12107.4°109.5°
C10C11H13104.9°109.5°
N7C11C12109.3°109.5°
N7C11H13105.3°109.5°
C11N7H16109.5°111.0°
C11N7H14109.5°111.0°
C11C12O2116.6°120.0°
C11C12O3116.2°120.0°
C12C11H13105.2°109.4°
O2C12O3127.1°120.0°
C12O3H30109.5°117.0°
N6C13C14123.2°110.3°
N6C13C16110.1°110.3°
N6C13H17108.4°110.3°
C13C14C1598.4°102.9°
C14C13C16100.8°105.2°
C14C13H17106.6°110.3°
C13C14H19112.2°110.7°
C13C14H18112.2°110.7°
C14C15N8106.5°103.3°
C14C15H20110.2°110.4°
C14C15H21110.2°110.9°
C15C14H19112.2°110.7°
C15C14H18112.1°110.8°
C15N8C16103.8°105.7°
N8C15H20110.2°110.7°
N8C15H21110.2°110.6°
C15N8H22110.8°111.0°
N8C16C13108.5°107.2°
N8C16H24109.7°110.0°
N8C16H23109.7°109.9°
C16N8H22110.9°111.3°
C7C17O4111.9°110.5°
C7C17C18103.5°104.1°
C7C17H25109.1°110.6°
C17C7H6107.9°110.3°
O4C17C18112.2°110.5°
O4C17H25110.7°110.4°
C17O4H26109.5°114.0°
C17C18O5116.0°110.5°
C17C18C6101.1°104.1°
C18C17H25109.2°110.5°
C17C18H27107.2°110.5°
O5C18C6115.8°110.5°
O5C18H27108.7°110.6°
C18O5H28109.5°114.0°
C18C6H5108.7°110.4°
C6C18H27107.3°110.5°
C13C16H24109.7°109.9°
C13C16H23109.7°109.9°
C16C13H17106.5°110.3°
H24C16H23109.5°109.9°
H20C15H21109.5°110.7°
H19C14H18109.5°110.8°
H2N1H1109.5°120.0°
H7C8H8109.5°109.5°
H9C9H10109.4°109.5°
H11C10H12109.5°109.5°
H16N7H14109.5°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C1N2C4178.7°179.9°
N1C1N2C2179.6°179.9°
N1C1C4C3178.8°179.8°
N1C1C4N40.1°0.1°
C1N1H2H1120.0°179.9°
C1N2C2N30.0°0.4°
N2C1C4C30.2°0.4°
N2C1C4N4178.7°180.0°
C1N2C2H3180.0°179.9°
N2C1N1H20.0°0.1°
N2C1N1H1120.0°180.0°
N2C2N3H3180.0°179.5°
N2C2N3C33.2°0.4°
C2N2C1C41.8°0.1°
C2N3C3C45.0°0.1°
C2N3C3N5178.1°179.3°
N3C3C4N5174.2°179.6°
N3C3C4N4177.3°180.0°
N3C3N5C5176.7°179.9°
N3C3N5C69.0°0.2°
N3C3C4C13.6°0.3°
C3N3C2H3176.8°180.0°
C3C4N4C1178.9°179.7°
C3C4N4C52.5°0.3°
C4C3N5C52.4°0.4°
C4C3N5C6176.7°179.6°
C4N4C5N50.9°0.0°
N4C4C3N53.1°0.4°
C4N4C5H4179.1°179.7°
N4C5N5H4180.0°179.7°
N4C5N5C6175.1°179.8°
C5N4C4C1178.6°180.0°
N4C5N5C31.0°0.3°
C5N5C6C3173.1°179.9°
C5N5C6O176.2°23.5°
C5N5C6C1840.8°91.9°
C5N5C6H5163.2°145.8°
N5C6O1C18122.3°118.8°
N5C6O1H5120.4°122.3°
N5C6O1C7156.8°159.3°
N5C6C18C17158.4°142.8°
N5C6C18O575.4°98.5°
N5C6C18H5123.0°122.3°
C6N5C5H44.9°0.0°
N5C6C18H2746.2°24.2°
C6O1C7C8140.8°159.4°
C6O1C7C1714.8°40.5°
O1C6C18C1739.8°24.0°
O1C6C18O5166.1°142.7°
O1C6C18H5118.4°118.8°
O1C6N5C396.9°156.5°
C6O1C7H6101.5°78.3°
O1C6C18H2772.3°94.7°
O1C7C8C17120.6°115.4°
O1C7C8H6118.3°122.4°
O1C7C8N6176.6°70.6°
O1C7C17H6117.0°118.9°
O1C7C17O4110.6°142.6°
O1C7C17C1810.4°23.9°
C7O1C6C1834.5°40.5°
O1C7C17H25126.6°94.7°
C7O1C6H582.8°78.3°
O1C7C8H762.5°169.4°
O1C7C8H855.5°49.4°
C7C8N6H7121.0°120.0°
C7C8N6H8121.0°120.0°
C7C8N6C974.9°164.4°
C7C8N6C13167.7°71.6°
C8C7C17H6121.0°122.2°
C8C7C17O4127.4°98.5°
C8C7C17C18111.6°142.8°
C8C7C17H254.6°24.1°
C7C8H7H8116.9°120.0°
C8N6C9C13127.4°124.0°
C8N6C9C10106.7°169.9°
C8N6C13C1451.8°78.4°
N6C8C7C1762.9°174.0°
C8N6C13C1666.7°165.9°
C8N6C13H17177.1°43.7°
N6C8C7H658.2°51.8°
N6C8H7H8116.9°120.0°
C8N6C9H9132.2°70.2°
C8N6C9H1014.5°49.8°
N6C9C10H9121.2°120.0°
N6C9C10H10121.2°120.0°
N6C9C10C11168.4°173.2°
C9N6C13C14169.1°45.6°
C9N6C13C1650.6°70.1°
C9N6C13H1765.5°167.7°
C9N6C8H7164.1°75.6°
C9N6C8H846.1°44.4°
N6C9H9H10116.4°120.0°
N6C9C10H1170.5°53.2°
N6C9C10H1247.2°66.7°
C9C10C11H11121.2°119.9°
C9C10C11H12121.2°120.0°
C9C10C11N768.8°65.0°
C9C10C11C1260.5°175.0°
C10C9N6C13125.9°66.1°
C10C9H9H10116.3°120.0°
C9C10H11H12116.3°119.9°
C9C10C11H13175.6°55.0°
C10C11N7C12132.0°120.0°
C10C11N7H13115.4°120.0°
C10C11C12H13115.0°120.0°
C10C11C12O2113.0°100.0°
C10C11C12O363.7°80.0°
C11C10C9H947.2°66.9°
C11C10C9H1070.5°53.2°
C11C10H11H12116.3°120.1°
C10C11N7H16180.0°60.0°
C10C11N7H1460.0°63.9°
N7C11C12H13112.7°120.0°
N7C11C12O219.4°20.0°
N7C11C12O3164.0°160.0°
N7C11C10H1152.4°175.0°
N7C11C10H12170.1°55.0°
C11N7H16H14120.0°123.9°
C11C12O2O3176.2°180.0°
C12C11C10H11178.4°55.0°
C12C11C10H1260.7°65.0°
C12C11N7H1648.0°60.0°
C12C11N7H1472.0°176.1°
C11C12O3H30176.2°180.0°
O2C12C11H13132.0°140.0°
O2C12O3H300.0°0.0°
O3C12C11H1351.3°40.0°
N6C13C14C16122.8°118.9°
N6C13C14H17126.1°122.1°
N6C13C14C15166.2°140.9°
N6C13C16N8161.8°117.8°
N6C13C16H17117.4°122.2°
N6C13C16H2478.3°1.7°
N6C13C16H2342.0°122.8°
N6C13C14H1975.7°100.8°
N6C13C14H1848.0°22.5°
C13N6C8H746.7°48.4°
C13N6C8H871.3°168.4°
C13N6C9H94.7°53.8°
C13N6C9H10113.0°173.8°
C13C14C15H19118.2°118.3°
C13C14C15H18118.2°118.4°
C13C14C15N844.3°37.3°
C14C13C16N830.3°1.1°
C14C13C16H17111.1°118.9°
C14C13C16H24150.1°120.6°
C14C13C16H2389.6°118.3°
C13C14C15H2075.2°81.0°
C13C14C15H21163.9°155.9°
C13C14H19H18125.2°123.3°
C14C15N8H20119.5°118.2°
C14C15N8H21119.5°118.8°
C14C15N8C1626.1°39.0°
C15C14C13C1643.3°22.0°
C15C14C13H1767.7°97.0°
C14C15H20H21121.4°123.2°
C15C14H19H18125.1°123.3°
C14C15N8H22145.1°159.8°
C15N8C16H22119.1°120.6°
C15N8C16C133.0°25.1°
C15N8C16H24122.9°144.5°
C15N8C16H23116.8°94.3°
N8C15H20H21121.4°123.0°
N8C15C14H19162.5°155.7°
N8C15C14H1873.9°81.0°
N8C16C13H24119.9°119.5°
N8C16C13H23119.8°119.4°
N8C16H24H23120.4°121.1°
N8C16C13H1780.8°120.0°
C16N8C15H2093.5°79.2°
C16N8C15H21145.6°157.8°
C7C17O4C18115.8°114.7°
C7C17O4H25121.9°122.7°
C7C17C18H25116.1°118.8°
C7C17C18O5155.4°118.7°
C7C17C18C629.3°0.0°
C7C17C18H2782.9°118.6°
C17C7C8H758.1°54.0°
C17C7C8H8176.1°66.0°
C7C17O4H26180.0°176.1°
O4C17C18H25123.1°122.5°
O4C17C18O534.6°0.0°
O4C17C18C691.5°118.7°
O4C17C7H66.4°23.7°
O4C17C18H27156.3°122.7°
C17C18O5C6118.3°114.7°
C17C18O5H27120.8°122.7°
C17C18C6H27112.1°118.7°
C17C18C6H578.6°94.8°
C18C17C7H6127.4°95.0°
C18C17O4H2664.2°61.4°
C17C18O5H28180.0°61.5°
O5C18C6H27121.6°122.7°
O5C18C17H2588.5°122.6°
O5C18C6H547.7°23.8°
C1C4C3N5177.8°179.8°
C4C1N1H2178.6°179.9°
C4C1N1H158.6°0.1°
C18C6N5C3146.1°88.2°
C6C18C17H25145.3°118.8°
C6C18O5H2861.6°176.1°
C3N5C5H4179.0°180.0°
C3N5C6H523.7°34.2°
C13C16H24H23120.4°121.1°
C16C13C14H19161.5°140.3°
C16C13C14H1874.8°96.4°
C13C16N8H22116.1°145.6°
H25C17C7H6116.5°146.3°
H25C17C18H2733.1°0.2°
H25C17O4H2658.1°61.2°
H24C16C13H1739.0°120.5°
H24C16N8H223.8°94.9°
H23C16C13H17159.3°0.6°
H23C16N8H22124.1°26.2°
H17C13C14H1950.5°21.4°
H17C13C14H18174.1°144.6°
H20C15C14H1943.0°37.3°
H20C15C14H18166.6°160.6°
H20C15N8H2225.6°41.5°
H21C15C14H1978.0°85.8°
H21C15C14H1845.7°37.5°
H21C15N8H2295.3°81.5°
H5C6C18H27169.3°146.5°
H6C7C8H7179.2°68.2°
H6C7C8H862.8°171.8°
H27C18O5H2859.2°61.2°
H9C9C10H11168.4°173.1°
H9C9C10H1274.0°53.2°
H10C9C10H1150.7°66.9°
H10C9C10H12168.4°173.2°
H11C10C11H1363.2°64.9°
H12C10C11H1354.4°175.0°
H13C11N7H1664.6°180.0°
H13C11N7H14175.4°56.1°

248636

PDB entries from 2026-02-04

PDB statisticsPDBj update infoContact PDBjnumon